| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787917
Identifier: 91787917
GI number: 91787917
Start: 2120030
End: 2121685
Strand: Reverse
Name: 91787917
Synonym: Bpro_2041
Alternate gene names: NA
Gene position: 2121685-2120030 (Counterclockwise)
Preceding gene: 91787918
Following gene: 91787916
Centisome position: 40.8
GC content: 66.85
Gene sequence:
>1656_bases ATGACCTTGCCCTCCCACTCCACGCACTTCACACATTCCACGCGCTCCCAATCCATGACACGTTTTATAGACGCCGCCAC GCTGAAAGCCTGGCTGCACGACGGCGAGGAAATCGCCCTGTTCGATGTGCGCGAGCACGGCCAGTACGGTCAGGCCCATT TGTTTTACGGCATCCCCCTGCCCTACAGCCGGCTGGAGCTGGACGCGCCGCGCCTGGCGCCGCGCCAAAGTGTCCGGCTG GTGGTGTACGACGATGATGGCCAGCAGGTCGCACCCTCGGCCGCGCTCCGCCTCGCCGCGCTGGGCTATTCCAATGTGCA CGTGCTGCAAGGCGGCAGCGCCGGCTGGCAGGCCGCCGGTTTTCCGCTGTTCGCCGGCGTCAACGTACCGTCCAAGAGTT TTGGCGAGCTGGCCGAGCAGGTCTATCACACGCCCCGGGTGAACGCAACCGAACTGGCGGCCATGCTGGCGCGCCGGGAA GACGTGGTGGTGCTGGACGGGCGGCCTTTTTCGGAATTCCAGAAAATGAACATTCCGGCGGCCATCAGTTGCCCCAACGG CGAGCTGGCCTTGCGCATCCGGGACCTGGTGCCCAGCGAACAAACGCACATCGTGATCAATTGCGCGGGGCGCACACGCA GCATCATCGGCGCGCAGACGCTGATCAACCTGGGCCTGCGCAATCCCGTCTCTGCGCTGGAAAACGGCACCCAGGGCTGG TACCTGGCCGATCTGGAACTCGAGCACGGCGGCACGCGCCGCTATGGTGAACCCGGCAAACCGGATGGCCAGGCGGGCAT GCGCGCCGCGGCACAGGCGCTGGCAGAACGTTTTGGCGTACCCGTCGTCAACGCGCAAACCGTGCGCGGCTGGGCCGATG ATGCGCAGCGCACGCTCTTTTTGTGCGATGTCCGCACCCCGGAAGAATATGCGCGCGGCAGCCTGCCCGGCGCCCAGCAC ACGCCGGGCGGCCAGCTGATCCAGGCCACCGACCAGTATGTGGGCGTGCGCCAGGCCCGGCTGGTGCTGTTCGATGCCGA CGGCATCCGTGCGCTGACGGTGGCCAGTTGGCTACGCCAGCTGGGCCACGATGCCAGCGTACTGGACCAGGGCCTGGCCA GCGGCCTGGCATTGCCTGAAGCGCAGCCGGCACCTTTGCCGGTGTTACCCACCATCAGCGCCAAAGCCCTGGCCGCCGGG ATGGCAAGCGGTGCGGCGCTTGCCATCGATCTACGCCCCAGCATGCAATTTCGCCAAGGCCATATTCCCGGTGCGCGCTG GGCCATTCGGCCGCGCCTTGCGGCAACACTGGCCGGCGAACACCGACCTGTGGTGCTGATTGCCGATGAACCCGCCGTGG CGGCCTGCGCTGCCACCGACCTTCAGGCGCTGGGCCTGTCGGCCAGCCTGCTTGAAGGCGGCCTGGCCGCCTGGCGTGCC GCTGGCCTGCCGTTGCAAGCCAGCGAAAACACCCCCGCCAACGGCGACTGCATTGACTTCCTGTTCTTTGTGCATGACCG GCACGACGGCAACAAGGAAGCGGCCCGCCAGTACCTGGCCTGGGAAGTCAACCTGATTGCGCAGCTCGACGCGCTTGAAC TGAAGGCCTTCCGGCTGCCAACCCCTTCGCTCGAGCCAGCCGACGCACCCGCCTAG
Upstream 100 bases:
>100_bases TGTATGGCCGCGCGCTTGAAACGCTGAACACGCGCACCGGCTACGACCTGGAAAAGGGCACGTACGAAACCATGGGGATC GGCGTGCAGACCCGCCGCTG
Downstream 100 bases:
>100_bases CCTCACTTATCCCATCCGCCCCACCCGCTTCATCCACTTTTTATTCAGGAGCCTGCCATGCTAACCAAGCTGAAATTCAC CGCTGCCTCACTCTGCTGGG
Product: rhodanese-like protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Thiosulfate Sulfurtransferase; Rhodanese-Like Domain-Containing Protein; Rhodanese Domain Protein/Cystathionine Beta-Lyase; Transferase; Sulfurtransferase; Rhodanese-Related Sulfurtransferase; Rhodanese-Like Family Protein; Rhodanese-Like Proteine; Transferase/Cystathione Beta-Lyase; Rhodanese-Like Protein Sulfurtransferase; Rhodanese-Like Domain-Containing; Rhodanese-Like Sulfur Transferase; Cystathionine Beta-Lyase; Thiosulfate Sulfurtransferase Rhodanese-Like
Number of amino acids: Translated: 551; Mature: 550
Protein sequence:
>551_residues MTLPSHSTHFTHSTRSQSMTRFIDAATLKAWLHDGEEIALFDVREHGQYGQAHLFYGIPLPYSRLELDAPRLAPRQSVRL VVYDDDGQQVAPSAALRLAALGYSNVHVLQGGSAGWQAAGFPLFAGVNVPSKSFGELAEQVYHTPRVNATELAAMLARRE DVVVLDGRPFSEFQKMNIPAAISCPNGELALRIRDLVPSEQTHIVINCAGRTRSIIGAQTLINLGLRNPVSALENGTQGW YLADLELEHGGTRRYGEPGKPDGQAGMRAAAQALAERFGVPVVNAQTVRGWADDAQRTLFLCDVRTPEEYARGSLPGAQH TPGGQLIQATDQYVGVRQARLVLFDADGIRALTVASWLRQLGHDASVLDQGLASGLALPEAQPAPLPVLPTISAKALAAG MASGAALAIDLRPSMQFRQGHIPGARWAIRPRLAATLAGEHRPVVLIADEPAVAACAATDLQALGLSASLLEGGLAAWRA AGLPLQASENTPANGDCIDFLFFVHDRHDGNKEAARQYLAWEVNLIAQLDALELKAFRLPTPSLEPADAPA
Sequences:
>Translated_551_residues MTLPSHSTHFTHSTRSQSMTRFIDAATLKAWLHDGEEIALFDVREHGQYGQAHLFYGIPLPYSRLELDAPRLAPRQSVRL VVYDDDGQQVAPSAALRLAALGYSNVHVLQGGSAGWQAAGFPLFAGVNVPSKSFGELAEQVYHTPRVNATELAAMLARRE DVVVLDGRPFSEFQKMNIPAAISCPNGELALRIRDLVPSEQTHIVINCAGRTRSIIGAQTLINLGLRNPVSALENGTQGW YLADLELEHGGTRRYGEPGKPDGQAGMRAAAQALAERFGVPVVNAQTVRGWADDAQRTLFLCDVRTPEEYARGSLPGAQH TPGGQLIQATDQYVGVRQARLVLFDADGIRALTVASWLRQLGHDASVLDQGLASGLALPEAQPAPLPVLPTISAKALAAG MASGAALAIDLRPSMQFRQGHIPGARWAIRPRLAATLAGEHRPVVLIADEPAVAACAATDLQALGLSASLLEGGLAAWRA AGLPLQASENTPANGDCIDFLFFVHDRHDGNKEAARQYLAWEVNLIAQLDALELKAFRLPTPSLEPADAPA >Mature_550_residues TLPSHSTHFTHSTRSQSMTRFIDAATLKAWLHDGEEIALFDVREHGQYGQAHLFYGIPLPYSRLELDAPRLAPRQSVRLV VYDDDGQQVAPSAALRLAALGYSNVHVLQGGSAGWQAAGFPLFAGVNVPSKSFGELAEQVYHTPRVNATELAAMLARRED VVVLDGRPFSEFQKMNIPAAISCPNGELALRIRDLVPSEQTHIVINCAGRTRSIIGAQTLINLGLRNPVSALENGTQGWY LADLELEHGGTRRYGEPGKPDGQAGMRAAAQALAERFGVPVVNAQTVRGWADDAQRTLFLCDVRTPEEYARGSLPGAQHT PGGQLIQATDQYVGVRQARLVLFDADGIRALTVASWLRQLGHDASVLDQGLASGLALPEAQPAPLPVLPTISAKALAAGM ASGAALAIDLRPSMQFRQGHIPGARWAIRPRLAATLAGEHRPVVLIADEPAVAACAATDLQALGLSASLLEGGLAAWRAA GLPLQASENTPANGDCIDFLFFVHDRHDGNKEAARQYLAWEVNLIAQLDALELKAFRLPTPSLEPADAPA
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59016; Mature: 58884
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPSHSTHFTHSTRSQSMTRFIDAATLKAWLHDGEEIALFDVREHGQYGQAHLFYGIPL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCCCEEEEEECCC PYSRLELDAPRLAPRQSVRLVVYDDDGQQVAPSAALRLAALGYSNVHVLQGGSAGWQAAG CHHHEECCCCCCCCCCCEEEEEECCCCCEECHHHHHHHHHCCCCCEEEEECCCCCCCCCC FPLFAGVNVPSKSFGELAEQVYHTPRVNATELAAMLARREDVVVLDGRPFSEFQKMNIPA CCEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHCCCCE AISCPNGELALRIRDLVPSEQTHIVINCAGRTRSIIGAQTLINLGLRNPVSALENGTQGW EEECCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCE YLADLELEHGGTRRYGEPGKPDGQAGMRAAAQALAERFGVPVVNAQTVRGWADDAQRTLF EEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEEE LCDVRTPEEYARGSLPGAQHTPGGQLIQATDQYVGVRQARLVLFDADGIRALTVASWLRQ EEECCCHHHHHCCCCCCCCCCCCCCEEEHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHH LGHDASVLDQGLASGLALPEAQPAPLPVLPTISAKALAAGMASGAALAIDLRPSMQFRQG HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCHHHCC HIPGARWAIRPRLAATLAGEHRPVVLIADEPAVAACAATDLQALGLSASLLEGGLAAWRA CCCCCCEEECCHHHHHHCCCCCCEEEEECCCCEEHHHHHHHHHHCCHHHHHHCHHHHHHH AGLPLQASENTPANGDCIDFLFFVHDRHDGNKEAARQYLAWEVNLIAQLDALELKAFRLP CCCCEECCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHEEEEEEEECCHHEEEEEECC TPSLEPADAPA CCCCCCCCCCC >Mature Secondary Structure TLPSHSTHFTHSTRSQSMTRFIDAATLKAWLHDGEEIALFDVREHGQYGQAHLFYGIPL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCCCEEEEEECCC PYSRLELDAPRLAPRQSVRLVVYDDDGQQVAPSAALRLAALGYSNVHVLQGGSAGWQAAG CHHHEECCCCCCCCCCCEEEEEECCCCCEECHHHHHHHHHCCCCCEEEEECCCCCCCCCC FPLFAGVNVPSKSFGELAEQVYHTPRVNATELAAMLARREDVVVLDGRPFSEFQKMNIPA CCEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHCCCCE AISCPNGELALRIRDLVPSEQTHIVINCAGRTRSIIGAQTLINLGLRNPVSALENGTQGW EEECCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCE YLADLELEHGGTRRYGEPGKPDGQAGMRAAAQALAERFGVPVVNAQTVRGWADDAQRTLF EEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEEE LCDVRTPEEYARGSLPGAQHTPGGQLIQATDQYVGVRQARLVLFDADGIRALTVASWLRQ EEECCCHHHHHCCCCCCCCCCCCCCEEEHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHH LGHDASVLDQGLASGLALPEAQPAPLPVLPTISAKALAAGMASGAALAIDLRPSMQFRQG HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCHHHCC HIPGARWAIRPRLAATLAGEHRPVVLIADEPAVAACAATDLQALGLSASLLEGGLAAWRA CCCCCCEEECCHHHHHHCCCCCCEEEEECCCCEEHHHHHHHHHHCCHHHHHHCHHHHHHH AGLPLQASENTPANGDCIDFLFFVHDRHDGNKEAARQYLAWEVNLIAQLDALELKAFRLP CCCCEECCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHEEEEEEEECCHHEEEEEECC TPSLEPADAPA CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA