| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787916
Identifier: 91787916
GI number: 91787916
Start: 2118974
End: 2119972
Strand: Reverse
Name: 91787916
Synonym: Bpro_2040
Alternate gene names: NA
Gene position: 2119972-2118974 (Counterclockwise)
Preceding gene: 91787917
Following gene: 91787915
Centisome position: 40.77
GC content: 63.96
Gene sequence:
>999_bases ATGCTAACCAAGCTGAAATTCACCGCTGCCTCACTCTGCTGGGCCCTGTTCGCCGTGCACGGCGGCGCTTCCGCACAACA GCCGATGTCCCAGGTCGGTGGTTTCCCGAACCAGACGATCAGATTTGTGTCGCCCTTTCCCGCCGGTGGCGGCAATGACG CCACGACCCGTTTCGTGACGAGCCGGCTGTCCGAGATCACCGGCCAAAGCGCGGTCGTCGACAACCGGGGCGGCGCCGGC GGCAACATCGGCGCCAAGACCGTGGCCGATGCCAGGCCCGACGGCTATACCGTGCTGACGGGCCAGGTCTCGCTGATGGC AGTCAACCCCACGCTGTATGCGTCGCCGGGCTTTGACCCGCTGAAAAATTTCATGCCCATCACCCAGATCAATGCGGCAC CCCTGGTCCTGGTCGTGGCCAGCAACTCACCCTACAAAACCATTGCCGACCTGGCCACCCAGATCAAGAGCCAGCCTGGC CGCGTCACCTATGCCACGCCCGGCAACGGCACGCTCTCGCACCTGGTCGGTGTGGTGCTTGAAAAGGACAGCGCCCTGAG CATGACCCATGTGCCGTACAAGGGCGCCGCCCCGGCGATCACCGACCTGCTCGGCGGTCAGGTCGATTTGCTCATCACCT CGACGGCATCCGTGTCCAGCTTCATCCAGAACGGCAAGATGCGCGCCCTCGCCGTGACCAGCCCGCGCCGCATTGGCGTG TTTGCAAAGGTCCCGACGCTGGAAGAGCTCGGCTACCGCAATACGACCTTTGAAGACTGGTATGGCTTTTTTGCGCCGGC CGGCACGCCGCCGGAACGCGTGGCCTATCTGCACGACAGCATTGTGCGGGCGCTCAAATTGCCGGAAGTCAACAAACTGA TCACCGACGGCGGCAGCGAAGTGGTCGGCAACACGCCGGCGGCCTTTGCTGCGCAGCTCAAGGAAGACATCGCCCGCTGG TCGCGCGTCGTCAAGCTGTCGGGTGCGAAACTGGACTGA
Upstream 100 bases:
>100_bases GCTGCCAACCCCTTCGCTCGAGCCAGCCGACGCACCCGCCTAGCCTCACTTATCCCATCCGCCCCACCCGCTTCATCCAC TTTTTATTCAGGAGCCTGCC
Downstream 100 bases:
>100_bases TGTGTCATGCACCAAGGTCACCCAGGCGCTCCCCGCATGAATAAAACATCGCCGCCGGCTACCTCACCATCCGGTGCGTC GCCCCTGACCCGTCTGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MLTKLKFTAASLCWALFAVHGGASAQQPMSQVGGFPNQTIRFVSPFPAGGGNDATTRFVTSRLSEITGQSAVVDNRGGAG GNIGAKTVADARPDGYTVLTGQVSLMAVNPTLYASPGFDPLKNFMPITQINAAPLVLVVASNSPYKTIADLATQIKSQPG RVTYATPGNGTLSHLVGVVLEKDSALSMTHVPYKGAAPAITDLLGGQVDLLITSTASVSSFIQNGKMRALAVTSPRRIGV FAKVPTLEELGYRNTTFEDWYGFFAPAGTPPERVAYLHDSIVRALKLPEVNKLITDGGSEVVGNTPAAFAAQLKEDIARW SRVVKLSGAKLD
Sequences:
>Translated_332_residues MLTKLKFTAASLCWALFAVHGGASAQQPMSQVGGFPNQTIRFVSPFPAGGGNDATTRFVTSRLSEITGQSAVVDNRGGAG GNIGAKTVADARPDGYTVLTGQVSLMAVNPTLYASPGFDPLKNFMPITQINAAPLVLVVASNSPYKTIADLATQIKSQPG RVTYATPGNGTLSHLVGVVLEKDSALSMTHVPYKGAAPAITDLLGGQVDLLITSTASVSSFIQNGKMRALAVTSPRRIGV FAKVPTLEELGYRNTTFEDWYGFFAPAGTPPERVAYLHDSIVRALKLPEVNKLITDGGSEVVGNTPAAFAAQLKEDIARW SRVVKLSGAKLD >Mature_332_residues MLTKLKFTAASLCWALFAVHGGASAQQPMSQVGGFPNQTIRFVSPFPAGGGNDATTRFVTSRLSEITGQSAVVDNRGGAG GNIGAKTVADARPDGYTVLTGQVSLMAVNPTLYASPGFDPLKNFMPITQINAAPLVLVVASNSPYKTIADLATQIKSQPG RVTYATPGNGTLSHLVGVVLEKDSALSMTHVPYKGAAPAITDLLGGQVDLLITSTASVSSFIQNGKMRALAVTSPRRIGV FAKVPTLEELGYRNTTFEDWYGFFAPAGTPPERVAYLHDSIVRALKLPEVNKLITDGGSEVVGNTPAAFAAQLKEDIARW SRVVKLSGAKLD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34893; Mature: 34893
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTKLKFTAASLCWALFAVHGGASAQQPMSQVGGFPNQTIRFVSPFPAGGGNDATTRFVT CCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHH SRLSEITGQSAVVDNRGGAGGNIGAKTVADARPDGYTVLTGQVSLMAVNPTLYASPGFDP HHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCEEEECCCCCH LKNFMPITQINAAPLVLVVASNSPYKTIADLATQIKSQPGRVTYATPGNGTLSHLVGVVL HHHCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHC EKDSALSMTHVPYKGAAPAITDLLGGQVDLLITSTASVSSFIQNGKMRALAVTSPRRIGV CCCCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCHHHHHHHHCCCEEEEEECCCCCEEE FAKVPTLEELGYRNTTFEDWYGFFAPAGTPPERVAYLHDSIVRALKLPEVNKLITDGGSE EEECCCHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC VVGNTPAAFAAQLKEDIARWSRVVKLSGAKLD CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLTKLKFTAASLCWALFAVHGGASAQQPMSQVGGFPNQTIRFVSPFPAGGGNDATTRFVT CCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHH SRLSEITGQSAVVDNRGGAGGNIGAKTVADARPDGYTVLTGQVSLMAVNPTLYASPGFDP HHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCEEEECCCCCH LKNFMPITQINAAPLVLVVASNSPYKTIADLATQIKSQPGRVTYATPGNGTLSHLVGVVL HHHCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHC EKDSALSMTHVPYKGAAPAITDLLGGQVDLLITSTASVSSFIQNGKMRALAVTSPRRIGV CCCCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCHHHHHHHHCCCEEEEEECCCCCEEE FAKVPTLEELGYRNTTFEDWYGFFAPAGTPPERVAYLHDSIVRALKLPEVNKLITDGGSE EEECCCHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC VVGNTPAAFAAQLKEDIARWSRVVKLSGAKLD CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3299368 [H]