| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787918
Identifier: 91787918
GI number: 91787918
Start: 2121685
End: 2122272
Strand: Reverse
Name: 91787918
Synonym: Bpro_2042
Alternate gene names: NA
Gene position: 2122272-2121685 (Counterclockwise)
Preceding gene: 91787921
Following gene: 91787917
Centisome position: 40.81
GC content: 61.9
Gene sequence:
>588_bases ATGACTGCAGCAGCACAGCGCACCCAGGTGGTGAACGACACCATCAAAAACATTAAAAATATTGTCGGAAATGGTGATGC CACACGCCAATCCCTGGCCGAGGTTCTGGCGGCACTCAATCAGCTGGCCGGACGCAAGGACCTGTGGAACGCCAGCGAAT TCGCCCCGCCCGAAGGCAATGAGCTGCAGGCCCGCTACCTGATCGCGGAAGATGCCGACCAGCGCTTTGCCCTTTACCTG AACGTGATGCGCCCCGGCAAGCGCATCGTGCCGCACAACCACACCACCTGGGCCTGCATCAGCGCCGTGGAAGGCACCGA GCTCAACCGTGTTTACGAACGCCAGGACGACGGCTCGGTGCCCGGCAAGGCCCAGCTCAAGGAAGTCAGCGCCATCGTGG TGGAGCCGGGCACGGGCATTGCATTGATGCCGGACGACATTCATTCGGTTGAAATCCCGGCCGGCCAGGTCATCCGGCAC CTGCACATGTATGGCCGCGCGCTTGAAACGCTGAACACGCGCACCGGCTACGACCTGGAAAAGGGCACGTACGAAACCAT GGGGATCGGCGTGCAGACCCGCCGCTGA
Upstream 100 bases:
>100_bases ATGTATTTATCTCTATTTCCGCATTGTTTCAAAAATATGACTTCACTATATTAGCCCCATCAAACAGATATTCCACTCAT ATTCACTCGGGAAAACTCTC
Downstream 100 bases:
>100_bases TGACCTTGCCCTCCCACTCCACGCACTTCACACATTCCACGCGCTCCCAATCCATGACACGTTTTATAGACGCCGCCACG CTGAAAGCCTGGCTGCACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MTAAAQRTQVVNDTIKNIKNIVGNGDATRQSLAEVLAALNQLAGRKDLWNASEFAPPEGNELQARYLIAEDADQRFALYL NVMRPGKRIVPHNHTTWACISAVEGTELNRVYERQDDGSVPGKAQLKEVSAIVVEPGTGIALMPDDIHSVEIPAGQVIRH LHMYGRALETLNTRTGYDLEKGTYETMGIGVQTRR
Sequences:
>Translated_195_residues MTAAAQRTQVVNDTIKNIKNIVGNGDATRQSLAEVLAALNQLAGRKDLWNASEFAPPEGNELQARYLIAEDADQRFALYL NVMRPGKRIVPHNHTTWACISAVEGTELNRVYERQDDGSVPGKAQLKEVSAIVVEPGTGIALMPDDIHSVEIPAGQVIRH LHMYGRALETLNTRTGYDLEKGTYETMGIGVQTRR >Mature_194_residues TAAAQRTQVVNDTIKNIKNIVGNGDATRQSLAEVLAALNQLAGRKDLWNASEFAPPEGNELQARYLIAEDADQRFALYLN VMRPGKRIVPHNHTTWACISAVEGTELNRVYERQDDGSVPGKAQLKEVSAIVVEPGTGIALMPDDIHSVEIPAGQVIRHL HMYGRALETLNTRTGYDLEKGTYETMGIGVQTRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21464; Mature: 21332
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAAQRTQVVNDTIKNIKNIVGNGDATRQSLAEVLAALNQLAGRKDLWNASEFAPPEGN CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC ELQARYLIAEDADQRFALYLNVMRPGKRIVPHNHTTWACISAVEGTELNRVYERQDDGSV CEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCC PGKAQLKEVSAIVVEPGTGIALMPDDIHSVEIPAGQVIRHLHMYGRALETLNTRTGYDLE CCHHHHHHEEEEEECCCCCEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCC KGTYETMGIGVQTRR CCCCHHHCCCEEECC >Mature Secondary Structure TAAAQRTQVVNDTIKNIKNIVGNGDATRQSLAEVLAALNQLAGRKDLWNASEFAPPEGN CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC ELQARYLIAEDADQRFALYLNVMRPGKRIVPHNHTTWACISAVEGTELNRVYERQDDGSV CEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCC PGKAQLKEVSAIVVEPGTGIALMPDDIHSVEIPAGQVIRHLHMYGRALETLNTRTGYDLE CCHHHHHHEEEEEECCCCCEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCC KGTYETMGIGVQTRR CCCCHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA