Click here to switch to the map view.

The map label for this gene is dadA [H]

Identifier: 91787875

GI number: 91787875

Start: 2067053

End: 2068264

Strand: Reverse

Name: dadA [H]

Synonym: Bpro_1999

Alternate gene names: 91787875

Gene position: 2068264-2067053 (Counterclockwise)

Preceding gene: 91787882

Following gene: 91787873

Centisome position: 39.77

GC content: 67.74

Gene sequence:

>1212_bases
ATGCATGTCTGCGTGCTCGGTGCGGGAATCGTCGGACTGGCCACGGCCTACAGCTTGCGCCGCGCCGGCCACGAGGTCAC
GGTGCTTGACCGTGCCGATCCGGGCAGCGGCGCCAGCGGCGGCAACGGTGCGCAACTGAGTTATTCCTACGTTCAGCCGC
TGGCTGATCCGGGCATCTGGCGGCAACTCCCCAACCTGCTGCTCTCGCCCACTTCGCCGCTGAAGCTGCGTCCCCGCCTG
GACCCACGGCAATGGCTGTGGGGCGCGCAGTTTCTGGCCGCATGCAAGGGCAGCACGTCGCGCAGCACCACGGCCCGGCT
GCTCGAACTGGCGGCGCTCAGCCGGCAGACCTTCGATGCCATGATGAACGAGGAGCAACTGGACTGCGATTTTTCCACCA
CCGGCAAGCTGGTGCTGTATCCGGACCAGCCGTCGTTCGCGGCCGCGCACCGGCAAATGCTGCTGCAGCGCGAGTTGGGC
AGCAGGCAGGAAGCCGTGGGCGCCGACCGCTGCGTGGAGATCGAGCCTGCGCTGGCAAGCCGCCACCGGCACATTGCCGG
CGCCATCTACACGCCCAGTGAATGCGCCGCCGACTGCCTGAAAACCTGCCGTGCGCTGCTGGCTGTGCTGCGCCGCCAGG
GTGTGCGGTTTTTACTCGGCTCGCCCATTGAGCACTTGGTGCTGCGCGGTGGATCGGTGGTGGCTGCGGCCACGCCGCAA
GGCCCGGTAGAGGCCGACCAGTATGTGATGGCGCTGGGCGCCCACTCCCCGCGCCTGGCCCGCACGCTCGGTGTGCACCT
TCCCGTCTACCCGCTCAAGGGCTACAGCATCACGGTGGAGGTAGGCGACGAGCCACACGCGGCACCGTCCGTGAGCGTCA
CGGACAGTGCCCGCAAAGTGGTGTTTGCGCGCATTGGCTCGCGCCTGCGGGTGGCGGGCATGGCTGAGCTGTCGGGCTAT
GACACCGCGGTTTGCCCCGCCCAGATCGCCTCACTGAAGGCCACGACCCAAATGCTTTTCCCGCAATGCAACGCGTTGGC
GGACCTGAGCCCCTGGGCCGGCATGCGCCCGGCGACGCCCACCGGCTTGCCCATCATCGGCAAGCACGCCAAAGGCCCTC
GCAACCTGCTATTCAACACGGGCCACGGCGCACTGGGCTTTACGCTGGCATTTGGTTCGGCGCAGCGCATCAACCGCTTG
CTGAGCCCCTGA

Upstream 100 bases:

>100_bases
CGGGCATAACCACAGGTCATGGGCGGTGGTGAATTCAGCATTGTTCAAACCTGCCAGCGCTGCGTAAAGTGACGCTCTTT
CCAAAAGCAAAAGGACTTTC

Downstream 100 bases:

>100_bases
CTCCTTACCCCCTGAGCATGACTGAGAACGACACCGCGCGGACAACGGGAGCCCGTTCAGACTGTCCGGGCCAATGCCTG
CTGAAGGCAGCGCACAAACG

Product: D-amino-acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MHVCVLGAGIVGLATAYSLRRAGHEVTVLDRADPGSGASGGNGAQLSYSYVQPLADPGIWRQLPNLLLSPTSPLKLRPRL
DPRQWLWGAQFLAACKGSTSRSTTARLLELAALSRQTFDAMMNEEQLDCDFSTTGKLVLYPDQPSFAAAHRQMLLQRELG
SRQEAVGADRCVEIEPALASRHRHIAGAIYTPSECAADCLKTCRALLAVLRRQGVRFLLGSPIEHLVLRGGSVVAAATPQ
GPVEADQYVMALGAHSPRLARTLGVHLPVYPLKGYSITVEVGDEPHAAPSVSVTDSARKVVFARIGSRLRVAGMAELSGY
DTAVCPAQIASLKATTQMLFPQCNALADLSPWAGMRPATPTGLPIIGKHAKGPRNLLFNTGHGALGFTLAFGSAQRINRL
LSP

Sequences:

>Translated_403_residues
MHVCVLGAGIVGLATAYSLRRAGHEVTVLDRADPGSGASGGNGAQLSYSYVQPLADPGIWRQLPNLLLSPTSPLKLRPRL
DPRQWLWGAQFLAACKGSTSRSTTARLLELAALSRQTFDAMMNEEQLDCDFSTTGKLVLYPDQPSFAAAHRQMLLQRELG
SRQEAVGADRCVEIEPALASRHRHIAGAIYTPSECAADCLKTCRALLAVLRRQGVRFLLGSPIEHLVLRGGSVVAAATPQ
GPVEADQYVMALGAHSPRLARTLGVHLPVYPLKGYSITVEVGDEPHAAPSVSVTDSARKVVFARIGSRLRVAGMAELSGY
DTAVCPAQIASLKATTQMLFPQCNALADLSPWAGMRPATPTGLPIIGKHAKGPRNLLFNTGHGALGFTLAFGSAQRINRL
LSP
>Mature_403_residues
MHVCVLGAGIVGLATAYSLRRAGHEVTVLDRADPGSGASGGNGAQLSYSYVQPLADPGIWRQLPNLLLSPTSPLKLRPRL
DPRQWLWGAQFLAACKGSTSRSTTARLLELAALSRQTFDAMMNEEQLDCDFSTTGKLVLYPDQPSFAAAHRQMLLQRELG
SRQEAVGADRCVEIEPALASRHRHIAGAIYTPSECAADCLKTCRALLAVLRRQGVRFLLGSPIEHLVLRGGSVVAAATPQ
GPVEADQYVMALGAHSPRLARTLGVHLPVYPLKGYSITVEVGDEPHAAPSVSVTDSARKVVFARIGSRLRVAGMAELSGY
DTAVCPAQIASLKATTQMLFPQCNALADLSPWAGMRPATPTGLPIIGKHAKGPRNLLFNTGHGALGFTLAFGSAQRINRL
LSP

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=408, Percent_Identity=33.3333333333333, Blast_Score=236, Evalue=1e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 42934; Mature: 42934

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVCVLGAGIVGLATAYSLRRAGHEVTVLDRADPGSGASGGNGAQLSYSYVQPLADPGIW
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEHHHHHCCCCCHHH
RQLPNLLLSPTSPLKLRPRLDPRQWLWGAQFLAACKGSTSRSTTARLLELAALSRQTFDA
HHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
MMNEEQLDCDFSTTGKLVLYPDQPSFAAAHRQMLLQRELGSRQEAVGADRCVEIEPALAS
HCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHCCCCCEEEECHHHHH
RHRHIAGAIYTPSECAADCLKTCRALLAVLRRQGVRFLLGSPIEHLVLRGGSVVAAATPQ
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHCCCCEEEEECCC
GPVEADQYVMALGAHSPRLARTLGVHLPVYPLKGYSITVEVGDEPHAAPSVSVTDSARKV
CCCCHHHEEEECCCCCCHHHHHHCCCCCEEEECCEEEEEEECCCCCCCCCCEECHHHHHH
VFARIGSRLRVAGMAELSGYDTAVCPAQIASLKATTQMLFPQCNALADLSPWAGMRPATP
HHHHHCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCC
TGLPIIGKHAKGPRNLLFNTGHGALGFTLAFGSAQRINRLLSP
CCCCEECCCCCCCCCCEEECCCCCEEEEEECCCHHHHHHHCCC
>Mature Secondary Structure
MHVCVLGAGIVGLATAYSLRRAGHEVTVLDRADPGSGASGGNGAQLSYSYVQPLADPGIW
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEHHHHHCCCCCHHH
RQLPNLLLSPTSPLKLRPRLDPRQWLWGAQFLAACKGSTSRSTTARLLELAALSRQTFDA
HHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
MMNEEQLDCDFSTTGKLVLYPDQPSFAAAHRQMLLQRELGSRQEAVGADRCVEIEPALAS
HCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHCCCCCEEEECHHHHH
RHRHIAGAIYTPSECAADCLKTCRALLAVLRRQGVRFLLGSPIEHLVLRGGSVVAAATPQ
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHCCCCEEEEECCC
GPVEADQYVMALGAHSPRLARTLGVHLPVYPLKGYSITVEVGDEPHAAPSVSVTDSARKV
CCCCHHHEEEECCCCCCHHHHHHCCCCCEEEECCEEEEEEECCCCCCCCCCEECHHHHHH
VFARIGSRLRVAGMAELSGYDTAVCPAQIASLKATTQMLFPQCNALADLSPWAGMRPATP
HHHHHCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCC
TGLPIIGKHAKGPRNLLFNTGHGALGFTLAFGSAQRINRLLSP
CCCCEECCCCCCCCCCEEECCCCCEEEEEECCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA