Click here to switch to the map view.

The map label for this gene is hslR [H]

Identifier: 91787882

GI number: 91787882

Start: 2076657

End: 2077085

Strand: Reverse

Name: hslR [H]

Synonym: Bpro_2006

Alternate gene names: 91787882

Gene position: 2077085-2076657 (Counterclockwise)

Preceding gene: 91787883

Following gene: 91787875

Centisome position: 39.94

GC content: 67.83

Gene sequence:

>429_bases
GTGATGGATAAATTACGCATCGACAAGTGGCTGTGGGCCGCCCGTTTCTACAAGACCCGCTCCCTGGCGGTTGAAGAGAT
CGACAAGGGCCGTGTGCATATCAATGACCAGGAAGCCAAACCGGCCCGCGAGGTCAAGGTGGGCGACACCGTGAACTTGC
GGCAAGGCCCGGTGACGCGCACGCTGGTGGTGCGCGGCATCAGCGGCCAGCGCGGCCCGGCACCAGTGGCGCAGCGGCTC
TACGAGGAAACGGCCGACAGCGTCAAAGCCCGCGAGCAAACGGCCGAGCAACGCCGCTATGCACCCGACCCCGCCCGGTC
GATCGAGCATGGCCGGCCCACCAAGCGCGGGCGGCGCGAGCTGGATGACGCCCGGCGCGGCTGGGGCGACCGCTGGAGCG
CCTCGCTGAACCCGGACAACAAGACCTGA

Upstream 100 bases:

>100_bases
GCCGCGTCGTCCTGGCATGGCGGGCGTGGGCGACTGAAGGAAAACCCGTATCCGGGGGCTTGAACCCTTGAAAACCGGTC
CAGCGGGTCCAAAATCACCA

Downstream 100 bases:

>100_bases
TGCCATGTTTTGTGGCTGTTTGCGCCAGCGGGGCGCGGACCAGTCCTGCGCTTGACTTGGCTGACAGCCCGGCGGCGCTC
ATGCGGGTGCCAACCCCCTG

Product: RNA-binding S4

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MMDKLRIDKWLWAARFYKTRSLAVEEIDKGRVHINDQEAKPAREVKVGDTVNLRQGPVTRTLVVRGISGQRGPAPVAQRL
YEETADSVKAREQTAEQRRYAPDPARSIEHGRPTKRGRRELDDARRGWGDRWSASLNPDNKT

Sequences:

>Translated_142_residues
MMDKLRIDKWLWAARFYKTRSLAVEEIDKGRVHINDQEAKPAREVKVGDTVNLRQGPVTRTLVVRGISGQRGPAPVAQRL
YEETADSVKAREQTAEQRRYAPDPARSIEHGRPTKRGRRELDDARRGWGDRWSASLNPDNKT
>Mature_142_residues
MMDKLRIDKWLWAARFYKTRSLAVEEIDKGRVHINDQEAKPAREVKVGDTVNLRQGPVTRTLVVRGISGQRGPAPVAQRL
YEETADSVKAREQTAEQRRYAPDPARSIEHGRPTKRGRRELDDARRGWGDRWSASLNPDNKT

Specific function: Involved in the recycling of free 50S ribosomal subunits that still carry a nascent chain. Binds RNA more specifically than DNA. Binds with very high affinity to the free 50S ribosomal subunit. Does not bind it when it is part of the 70S ribosome [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=128, Percent_Identity=48.4375, Blast_Score=110, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 16289; Mature: 16289

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDKLRIDKWLWAARFYKTRSLAVEEIDKGRVHINDQEAKPAREVKVGDTVNLRQGPVTR
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHEECCCCCCCCCCCCCE
TLVVRGISGQRGPAPVAQRLYEETADSVKAREQTAEQRRYAPDPARSIEHGRPTKRGRRE
EHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHH
LDDARRGWGDRWSASLNPDNKT
HHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMDKLRIDKWLWAARFYKTRSLAVEEIDKGRVHINDQEAKPAREVKVGDTVNLRQGPVTR
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHEECCCCCCCCCCCCCE
TLVVRGISGQRGPAPVAQRLYEETADSVKAREQTAEQRRYAPDPARSIEHGRPTKRGRRE
EHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHH
LDDARRGWGDRWSASLNPDNKT
HHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]