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The map label for this gene is dapD [H]

Identifier: 91787872

GI number: 91787872

Start: 2063858

End: 2064697

Strand: Reverse

Name: dapD [H]

Synonym: Bpro_1996

Alternate gene names: 91787872

Gene position: 2064697-2063858 (Counterclockwise)

Preceding gene: 91787873

Following gene: 91787871

Centisome position: 39.7

GC content: 62.62

Gene sequence:

>840_bases
ATGACACAAGACAACCTGCAAAGCGCCCTCCAGAACACGATTGACGCGGCCTGGGAAGATCGCGCCAACCTGTCGCCCAA
ATCAGCCCCCAAAGAGGTGCTGGAAGCGGTTGAGCACACCATTGCCCAGCTCAACAGCGGCAAGCTGCGCGTCGCCACCC
GCGAAGGCGTAGGCCAGTGGACCACGCACCAATGGATCAAGAAGGCGGTGCTTTTGAGCTTTCGCCTCAAGGACAACCAG
CTCATGCGCGCTGGTGACCTCGGCTTTTTTGACAAGGTTCAAACCAAGTTTGCGCACCTGAGTGAAGATGAGATGCGCGC
TACCGGCGTGCGCGTGGTGCCCCCCGCCGTCGCCCGCCGCGGCAGCTACATCGCCAAGGGCGCGATCTTGATGCCCAGCT
ACGTGAACATCGGCGCCTGGGTCGGCGAAGGCACCATGGTCGACACCTGGGCCACCGTGGGCAGCTGCGCGCAGGTCGGC
AACAATGTGCACCTCTCCGGTGGCGTGGGACTGGGCGGCGTGCTGGAGCCGCTGCAGGCCAACCCGACCATCATTGAAGA
CAACTGCTTTATTGGCGCGCGCTCCGAGGTGGTTGAAGGCGTGATTGTTGAGGAAAACTCGGTGATTTCCATGGGTGTTT
ACATCGGCCAGAGCACGCCGATCTATGACCGTGAAGCGGACACCGTCACCTACGGCCGCATCCCGGCCGGCTCCGTCGTG
GTGTCGGGCAACCTGCCCAAGGCCGGTGGCAAGTACAGCCTGTACTGCGCCGTGATCGTCAAGCGGGTGGATGCCAAGAC
GCGCGCCACGACCAGCCTGAACGACCTGCTGCGTGATTGA

Upstream 100 bases:

>100_bases
ACTGGTGGCGGAAACTGCCGAATGCGTGGAAGCCGCGGAGCGCATCGTTCAGTTCATTCAATCCAAAGCTCGCTGAAAAA
CCCTAACGAAGACTCACTCC

Downstream 100 bases:

>100_bases
TTTGACTGAAGACCTGAAAGGATAATTGATCATGACTGAAGGCAGGACTATGAGCACGATGGAGAGGATCCTTCGTTTGA
TGGCGGATAAAAAAGCATCG

Product: 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase

Products: NA

Alternate protein names: Tetrahydrodipicolinate N-succinyltransferase; THDP succinyltransferase; THP succinyltransferase; Tetrahydropicolinate succinylase [H]

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTQDNLQSALQNTIDAAWEDRANLSPKSAPKEVLEAVEHTIAQLNSGKLRVATREGVGQWTTHQWIKKAVLLSFRLKDNQ
LMRAGDLGFFDKVQTKFAHLSEDEMRATGVRVVPPAVARRGSYIAKGAILMPSYVNIGAWVGEGTMVDTWATVGSCAQVG
NNVHLSGGVGLGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEENSVISMGVYIGQSTPIYDREADTVTYGRIPAGSVV
VSGNLPKAGGKYSLYCAVIVKRVDAKTRATTSLNDLLRD

Sequences:

>Translated_279_residues
MTQDNLQSALQNTIDAAWEDRANLSPKSAPKEVLEAVEHTIAQLNSGKLRVATREGVGQWTTHQWIKKAVLLSFRLKDNQ
LMRAGDLGFFDKVQTKFAHLSEDEMRATGVRVVPPAVARRGSYIAKGAILMPSYVNIGAWVGEGTMVDTWATVGSCAQVG
NNVHLSGGVGLGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEENSVISMGVYIGQSTPIYDREADTVTYGRIPAGSVV
VSGNLPKAGGKYSLYCAVIVKRVDAKTRATTSLNDLLRD
>Mature_278_residues
TQDNLQSALQNTIDAAWEDRANLSPKSAPKEVLEAVEHTIAQLNSGKLRVATREGVGQWTTHQWIKKAVLLSFRLKDNQL
MRAGDLGFFDKVQTKFAHLSEDEMRATGVRVVPPAVARRGSYIAKGAILMPSYVNIGAWVGEGTMVDTWATVGSCAQVGN
NVHLSGGVGLGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEENSVISMGVYIGQSTPIYDREADTVTYGRIPAGSVVV
SGNLPKAGGKYSLYCAVIVKRVDAKTRATTSLNDLLRD

Specific function: Biosynthesis of diaminopimelate and lysine from aspartate semialdehyde; fourth step. [C]

COG id: COG2171

COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

Organism=Escherichia coli, GI1786362, Length=269, Percent_Identity=69.1449814126394, Blast_Score=360, Evalue=1e-101,

Paralogues:

None

Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005664
- InterPro:   IPR018357
- InterPro:   IPR023180
- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: =2.3.1.117 [H]

Molecular weight: Translated: 30001; Mature: 29869

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS00101 HEXAPEP_TRANSFERASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQDNLQSALQNTIDAAWEDRANLSPKSAPKEVLEAVEHTIAQLNSGKLRVATREGVGQW
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCH
TTHQWIKKAVLLSFRLKDNQLMRAGDLGFFDKVQTKFAHLSEDEMRATGVRVVPPAVARR
HHHHHHHHHHHHHEEECCCCEEEECCCCHHHHHHHHHHHCCHHHHHHCCEEEECHHHHHC
GSYIAKGAILMPSYVNIGAWVGEGTMVDTWATVGSCAQVGNNVHLSGGVGLGGVLEPLQA
CCEEECCEEECCCHHCCEEEECCCEEEEHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCC
NPTIIEDNCFIGARSEVVEGVIVEENSVISMGVYIGQSTPIYDREADTVTYGRIPAGSVV
CCCEEECCCEECCHHHHHCEEEECCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCEE
VSGNLPKAGGKYSLYCAVIVKRVDAKTRATTSLNDLLRD
EECCCCCCCCCEEEEHHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TQDNLQSALQNTIDAAWEDRANLSPKSAPKEVLEAVEHTIAQLNSGKLRVATREGVGQW
CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCH
TTHQWIKKAVLLSFRLKDNQLMRAGDLGFFDKVQTKFAHLSEDEMRATGVRVVPPAVARR
HHHHHHHHHHHHHEEECCCCEEEECCCCHHHHHHHHHHHCCHHHHHHCCEEEECHHHHHC
GSYIAKGAILMPSYVNIGAWVGEGTMVDTWATVGSCAQVGNNVHLSGGVGLGGVLEPLQA
CCEEECCEEECCCHHCCEEEECCCEEEEHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCC
NPTIIEDNCFIGARSEVVEGVIVEENSVISMGVYIGQSTPIYDREADTVTYGRIPAGSVV
CCCEEECCCEECCHHHHHCEEEECCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCEE
VSGNLPKAGGKYSLYCAVIVKRVDAKTRATTSLNDLLRD
EECCCCCCCCCEEEEHHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA