| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yfcB [C]
Identifier: 91787869
GI number: 91787869
Start: 2060433
End: 2061323
Strand: Reverse
Name: yfcB [C]
Synonym: Bpro_1993
Alternate gene names: 91787869
Gene position: 2061323-2060433 (Counterclockwise)
Preceding gene: 91787870
Following gene: 91787868
Centisome position: 39.64
GC content: 62.4
Gene sequence:
>891_bases ATGAGTTCGGCAACGCCTGTGACGGTACTCGCGCTGATCGAGCAGATGGCCGCCCGGCTGGAAGCCGCAGGGCTGAGCTT TTCGGACGGCTTTGGGCACGGCACGACCAATGCCTTTGATGAAGCCGCCTGGCTGGTGCTGTGGAAGCTGGGCCTGCCGC TGGACGACCTGGATTCGGTGGAAAACAAGGTGGTAGCCCCCGCAGATATTGAGCAGGTAGCCATGCTTTTCGAAGCGCGC ATCAGCAGCCGCAAACCCGCTGCCTACCTCACCCGCGAAGCCTGGCTGATGGGCATTCCCTTTTATGTCGACGAGCGCGT GATCATTCCGCGCTCCCTCATTGCCGAGTTGCTGGTCGACGCCAGCATCGACCCCTGGCTGGACGAGAACACCCGCCGCG TGCTGGATTTGTGCACCGGCAATGGCAGCCTGGCGGTGCTGGCGGCCATGACCTACCCCGAGGTCACGGTCGATGCCGCC GATATCAGCCCGGATGCGCTGGCGGTGGCCCGCATCAATGTGGACAGGCACCAGCTGCAGCAGCGCATCACGCTGATCGA GTCCGATGGGCTGGCCGCCTGCCCCGGTCCTTACGATCTGATTTTGTGCAACCCACCCTATGTCAATGCCGCCAGCATGG CAGCCCTGCCGGCTGAATTCCGGGCTGAACCGGGGCTGGCGCTGGCCGGTGGCGCCGACGGGATGGACTTCATCAGAAGC CTTTTTCTCAACGCCGCCCGCCATATGAGCGAAAATGCCGTCCTGGTGCTGGAAATTGGCAACGAGCGCGGGAATTTTGA ACGCGCCTTTCCTCACCTTGAACCGCTCTGGTTTGAAACCAGTGCCGGGAGTGACCAGGTGATGATTCTCACGCGCGAAC AGTTGGCCTGA
Upstream 100 bases:
>100_bases TCAAAAACATCTACAAGGGTGTCCTGGAACGGCTGGCTGGCATAAGCGGCATGGCAGGTGCGTCAGGTCTGGCCGCAGTG GCTGATTCGACGTCCTCACC
Downstream 100 bases:
>100_bases AGCGCTGGCCCGGAATTTGCGCCTGGATCGATGGGTGTGCAGCGTGCCGCCCGAATAATTTTTCTGATCCTGTTGGATCT AGAGTCAGTGGTTTAAATGA
Product: N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSSATPVTVLALIEQMAARLEAAGLSFSDGFGHGTTNAFDEAAWLVLWKLGLPLDDLDSVENKVVAPADIEQVAMLFEAR ISSRKPAAYLTREAWLMGIPFYVDERVIIPRSLIAELLVDASIDPWLDENTRRVLDLCTGNGSLAVLAAMTYPEVTVDAA DISPDALAVARINVDRHQLQQRITLIESDGLAACPGPYDLILCNPPYVNAASMAALPAEFRAEPGLALAGGADGMDFIRS LFLNAARHMSENAVLVLEIGNERGNFERAFPHLEPLWFETSAGSDQVMILTREQLA
Sequences:
>Translated_296_residues MSSATPVTVLALIEQMAARLEAAGLSFSDGFGHGTTNAFDEAAWLVLWKLGLPLDDLDSVENKVVAPADIEQVAMLFEAR ISSRKPAAYLTREAWLMGIPFYVDERVIIPRSLIAELLVDASIDPWLDENTRRVLDLCTGNGSLAVLAAMTYPEVTVDAA DISPDALAVARINVDRHQLQQRITLIESDGLAACPGPYDLILCNPPYVNAASMAALPAEFRAEPGLALAGGADGMDFIRS LFLNAARHMSENAVLVLEIGNERGNFERAFPHLEPLWFETSAGSDQVMILTREQLA >Mature_295_residues SSATPVTVLALIEQMAARLEAAGLSFSDGFGHGTTNAFDEAAWLVLWKLGLPLDDLDSVENKVVAPADIEQVAMLFEARI SSRKPAAYLTREAWLMGIPFYVDERVIIPRSLIAELLVDASIDPWLDENTRRVLDLCTGNGSLAVLAAMTYPEVTVDAAD ISPDALAVARINVDRHQLQQRITLIESDGLAACPGPYDLILCNPPYVNAASMAALPAEFRAEPGLALAGGADGMDFIRSL FLNAARHMSENAVLVLEIGNERGNFERAFPHLEPLWFETSAGSDQVMILTREQLA
Specific function: Unknown
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=133, Percent_Identity=33.0827067669173, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI87082085, Length=289, Percent_Identity=39.7923875432526, Blast_Score=215, Evalue=3e-57, Organism=Escherichia coli, GI1787463, Length=187, Percent_Identity=31.5508021390374, Blast_Score=75, Evalue=4e-15, Organism=Drosophila melanogaster, GI24582226, Length=218, Percent_Identity=27.9816513761468, Blast_Score=69, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR017127 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 32092; Mature: 31961
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSATPVTVLALIEQMAARLEAAGLSFSDGFGHGTTNAFDEAAWLVLWKLGLPLDDLDSV CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH ENKVVAPADIEQVAMLFEARISSRKPAAYLTREAWLMGIPFYVDERVIIPRSLIAELLVD HCCEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCEECCEEECCHHHHHHHHHC ASIDPWLDENTRRVLDLCTGNGSLAVLAAMTYPEVTVDAADISPDALAVARINVDRHQLQ CCCCCCCCCCHHEEEEEECCCCCEEEEEEECCCCEEEECCCCCCCEEEEEEECCHHHHHH QRITLIESDGLAACPGPYDLILCNPPYVNAASMAALPAEFRAEPGLALAGGADGMDFIRS HHHHEEECCCCEECCCCCEEEEECCCCCCHHHHHHCCHHHCCCCCEEEECCCCCHHHHHH LFLNAARHMSENAVLVLEIGNERGNFERAFPHLEPLWFETSAGSDQVMILTREQLA HHHHHHHHCCCCCEEEEEECCCCCCHHHHCCCCCCEEEECCCCCCEEEEEECCCCC >Mature Secondary Structure SSATPVTVLALIEQMAARLEAAGLSFSDGFGHGTTNAFDEAAWLVLWKLGLPLDDLDSV CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH ENKVVAPADIEQVAMLFEARISSRKPAAYLTREAWLMGIPFYVDERVIIPRSLIAELLVD HCCEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCEECCEEECCHHHHHHHHHC ASIDPWLDENTRRVLDLCTGNGSLAVLAAMTYPEVTVDAADISPDALAVARINVDRHQLQ CCCCCCCCCCHHEEEEEECCCCCEEEEEEECCCCEEEECCCCCCCEEEEEEECCHHHHHH QRITLIESDGLAACPGPYDLILCNPPYVNAASMAALPAEFRAEPGLALAGGADGMDFIRS HHHHEEECCCCEECCCCCEEEEECCCCCCHHHHHHCCHHHCCCCCEEEECCCCCHHHHHH LFLNAARHMSENAVLVLEIGNERGNFERAFPHLEPLWFETSAGSDQVMILTREQLA HHHHHHHHCCCCCEEEEEECCCCCCHHHHCCCCCCEEEECCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]