| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91787859
Identifier: 91787859
GI number: 91787859
Start: 2050933
End: 2051448
Strand: Direct
Name: 91787859
Synonym: Bpro_1983
Alternate gene names: NA
Gene position: 2050933-2051448 (Clockwise)
Preceding gene: 91787858
Following gene: 91787860
Centisome position: 39.44
GC content: 52.71
Gene sequence:
>516_bases GTGAAGGTGGTAGCCCGGTTGGACGATAAAAGGAAATGTGTTGTCCCGGTGCGCGGCATGGGAAGAGGTCAGACTTTCAC GGCGCATGCCGGTCGTGTCAAATTGGGAAGGGTTCAAGATGACGCGTTGGCAGAGTTTCCCGAGCAAGTGTTCCACCTGC AGCCTACCGTAAACAGTTGCTCTTGGTTGCCTTGGCTTTGCGGCATGATGGTTGTCGCAGGAGGGAGGGATAATTGCTCC AATGGGGGGCGGCAACAAACTGTTTCATCTGCATCGCTGGCCGCTACGTTGGTTCGGGGTAAAAACGCAATCTCTACCAA CCTGACTTCGGGTGCTCTTATCTGGAAAACTTGGCAAGCTCTTTTCGGCGTCAACGGGCTTGAAAGAGCACCCGGGGTGC GCCAGGAATACGCGAATCCTGATTTGAAATTCTTTGTCTGGAATTTCATCGAAAATACCGGTTTTGGGCGGTGGACGCGC TTGACCTTTCATGCCGTGAGTAATCGAAGCAAATAA
Upstream 100 bases:
>100_bases CGGCTCGGGTTTCTCGACGGGCAGCTGGGTCTGGTTCTTGCGATCTCCATAGCCGAAGAAACCTATTATCGATACCTCAA GTTATGGTTGTCCCAACGCC
Downstream 100 bases:
>100_bases TAATGATTAGAGTTGGGTATCCCTGCACATAGATCAAAGGTGGGTCTTGTCAACCGAGGGCTTCGTAAACTTGACTCCCA ATCGCCCGTCAAAATAACCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MKVVARLDDKRKCVVPVRGMGRGQTFTAHAGRVKLGRVQDDALAEFPEQVFHLQPTVNSCSWLPWLCGMMVVAGGRDNCS NGGRQQTVSSASLAATLVRGKNAISTNLTSGALIWKTWQALFGVNGLERAPGVRQEYANPDLKFFVWNFIENTGFGRWTR LTFHAVSNRSK
Sequences:
>Translated_171_residues MKVVARLDDKRKCVVPVRGMGRGQTFTAHAGRVKLGRVQDDALAEFPEQVFHLQPTVNSCSWLPWLCGMMVVAGGRDNCS NGGRQQTVSSASLAATLVRGKNAISTNLTSGALIWKTWQALFGVNGLERAPGVRQEYANPDLKFFVWNFIENTGFGRWTR LTFHAVSNRSK >Mature_171_residues MKVVARLDDKRKCVVPVRGMGRGQTFTAHAGRVKLGRVQDDALAEFPEQVFHLQPTVNSCSWLPWLCGMMVVAGGRDNCS NGGRQQTVSSASLAATLVRGKNAISTNLTSGALIWKTWQALFGVNGLERAPGVRQEYANPDLKFFVWNFIENTGFGRWTR LTFHAVSNRSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18897; Mature: 18897
Theoretical pI: Translated: 10.96; Mature: 10.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVVARLDDKRKCVVPVRGMGRGQTFTAHAGRVKLGRVQDDALAEFPEQVFHLQPTVNSC CCEEECCCCCCEEEEECCCCCCCCEEEECCCEEEECCCCHHHHHHHHHHHEECCCCCCCC SWLPWLCGMMVVAGGRDNCSNGGRQQTVSSASLAATLVRGKNAISTNLTSGALIWKTWQA CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH LFGVNGLERAPGVRQEYANPDLKFFVWNFIENTGFGRWTRLTFHAVSNRSK HHCCCCHHHCCCCHHHHCCCCCEEEEEEHHHCCCCCCEEEEEEEECCCCCC >Mature Secondary Structure MKVVARLDDKRKCVVPVRGMGRGQTFTAHAGRVKLGRVQDDALAEFPEQVFHLQPTVNSC CCEEECCCCCCEEEEECCCCCCCCEEEECCCEEEECCCCHHHHHHHHHHHEECCCCCCCC SWLPWLCGMMVVAGGRDNCSNGGRQQTVSSASLAATLVRGKNAISTNLTSGALIWKTWQA CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH LFGVNGLERAPGVRQEYANPDLKFFVWNFIENTGFGRWTRLTFHAVSNRSK HHCCCCHHHCCCCHHHHCCCCCEEEEEEHHHCCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA