| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787858
Identifier: 91787858
GI number: 91787858
Start: 2050191
End: 2050961
Strand: Direct
Name: 91787858
Synonym: Bpro_1982
Alternate gene names: NA
Gene position: 2050191-2050961 (Clockwise)
Preceding gene: 91787853
Following gene: 91787859
Centisome position: 39.42
GC content: 52.27
Gene sequence:
>771_bases TTGGCAAGCTTGTCCATAATAGTTATAACGAAAAACGAAGCCCATAACATTGAAGCTTGCCTTCGCTCTGTTTCTTTCGC AGACCAGATCGTTGTGCTGGATTCTGGCAGTACAGACCAAACCGTCGAGATCGCGCGCGGCCTGGGGGCTACGGTGACCG TTAATTCGGACTGGCAGGGGTTCGGAATTCAGAAAAATCGAGCCCTTGCATTGGCTGGGTCCGATTGGGTGCTTTCAATT GATGCGGACGAATGGGTCCCTGAGGAGTTGGCTGCGGAAATACAGTCGGCCATGAAATCCCCACGGTTTGATGTTTATTC TTTCCCTCGCCTCTCAAGCTATTGCGGCCAGTACATGCGCCACTCTGGTTGGTATCCTGACCGTGTAACGCGTTTGTTTC GCCCTCAATTCGCCAAGTTTTCAGACGATTTGGTTCACGAAAAGATCGTGACCACAAGTCCGGTGGGGCAGCTTCACTCT GCTCTGCACCATGAAAGTTATCGTAGCCTGGAGACTGTGCTGGACAAGGCCAATCGATACTCCACGGATGGGGCTCAGAT GTTGAAAAACAAAGGGCGTGCTTCGTCTTTGGGGACGGCGGTGGTGCACGGCGTATGGGCTTTTATACGAACTTACTTCT TGCGGCTCGGGTTTCTCGACGGGCAGCTGGGTCTGGTTCTTGCGATCTCCATAGCCGAAGAAACCTATTATCGATACCTC AAGTTATGGTTGTCCCAACGCCGTGAAGGTGGTAGCCCGGTTGGACGATAA
Upstream 100 bases:
>100_bases GAATATGCGGGAGTGCGACTGATCGAGAGCGCAACACGGCGAGGGTCTACTGGGCTGTCGTCGGCGCGCATCAACTCGTT TAACTGAACAAGAGAATCCT
Downstream 100 bases:
>100_bases AAGGAAATGTGTTGTCCCGGTGCGCGGCATGGGAAGAGGTCAGACTTTCACGGCGCATGCCGGTCGTGTCAAATTGGGAA GGGTTCAAGATGACGCGTTG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MASLSIIVITKNEAHNIEACLRSVSFADQIVVLDSGSTDQTVEIARGLGATVTVNSDWQGFGIQKNRALALAGSDWVLSI DADEWVPEELAAEIQSAMKSPRFDVYSFPRLSSYCGQYMRHSGWYPDRVTRLFRPQFAKFSDDLVHEKIVTTSPVGQLHS ALHHESYRSLETVLDKANRYSTDGAQMLKNKGRASSLGTAVVHGVWAFIRTYFLRLGFLDGQLGLVLAISIAEETYYRYL KLWLSQRREGGSPVGR
Sequences:
>Translated_256_residues MASLSIIVITKNEAHNIEACLRSVSFADQIVVLDSGSTDQTVEIARGLGATVTVNSDWQGFGIQKNRALALAGSDWVLSI DADEWVPEELAAEIQSAMKSPRFDVYSFPRLSSYCGQYMRHSGWYPDRVTRLFRPQFAKFSDDLVHEKIVTTSPVGQLHS ALHHESYRSLETVLDKANRYSTDGAQMLKNKGRASSLGTAVVHGVWAFIRTYFLRLGFLDGQLGLVLAISIAEETYYRYL KLWLSQRREGGSPVGR >Mature_255_residues ASLSIIVITKNEAHNIEACLRSVSFADQIVVLDSGSTDQTVEIARGLGATVTVNSDWQGFGIQKNRALALAGSDWVLSID ADEWVPEELAAEIQSAMKSPRFDVYSFPRLSSYCGQYMRHSGWYPDRVTRLFRPQFAKFSDDLVHEKIVTTSPVGQLHSA LHHESYRSLETVLDKANRYSTDGAQMLKNKGRASSLGTAVVHGVWAFIRTYFLRLGFLDGQLGLVLAISIAEETYYRYLK LWLSQRREGGSPVGR
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 28581; Mature: 28449
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLSIIVITKNEAHNIEACLRSVSFADQIVVLDSGSTDQTVEIARGLGATVTVNSDWQG CCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHCCCCEEEECCCCCC FGIQKNRALALAGSDWVLSIDADEWVPEELAAEIQSAMKSPRFDVYSFPRLSSYCGQYMR CCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH HSGWYPDRVTRLFRPQFAKFSDDLVHEKIVTTSPVGQLHSALHHESYRSLETVLDKANRY HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC STDGAQMLKNKGRASSLGTAVVHGVWAFIRTYFLRLGFLDGQLGLVLAISIAEETYYRYL CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHH KLWLSQRREGGSPVGR HHHHHHHHCCCCCCCC >Mature Secondary Structure ASLSIIVITKNEAHNIEACLRSVSFADQIVVLDSGSTDQTVEIARGLGATVTVNSDWQG CCEEEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHCCCCEEEECCCCCC FGIQKNRALALAGSDWVLSIDADEWVPEELAAEIQSAMKSPRFDVYSFPRLSSYCGQYMR CCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH HSGWYPDRVTRLFRPQFAKFSDDLVHEKIVTTSPVGQLHSALHHESYRSLETVLDKANRY HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC STDGAQMLKNKGRASSLGTAVVHGVWAFIRTYFLRLGFLDGQLGLVLAISIAEETYYRYL CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHH KLWLSQRREGGSPVGR HHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]