Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787818

Identifier: 91787818

GI number: 91787818

Start: 2002112

End: 2003467

Strand: Direct

Name: 91787818

Synonym: Bpro_1941

Alternate gene names: NA

Gene position: 2002112-2003467 (Clockwise)

Preceding gene: 91787817

Following gene: 91787819

Centisome position: 38.5

GC content: 51.47

Gene sequence:

>1356_bases
ATGAGTTCTGACGTTTCTTGGCAACGACAGACGTTGAAGGCGGCGGGAATTAGCCTGATTGACTGTGACCACCGCACGCC
ACCAGCCGCAAATGAAGGCTACCCATATATCGCCATACCTCAGTTAAAGAACGGGCATGTTTCATTGGATGGCGTCCGAC
GTATTTCTCCGGAGGACTATCTGGAGTGGACCAAGAAGCTCAAGCCTCAAACGCATGACGTAATTGTTGTTCGGCGATGC
AATTCCGGAGATAGTGCGCTTATCCCGCCGGGCCTTGAATGCGCTATTGGTCAAAACCTTGTCATTCTTCGTTCAGATGG
AAAAACCGTCCAACCACAGTTTCTGAGGTGGCTTCTCAATGGGCCAGATTGGTGGGAACAGGTCTCGAAATTTATTAACG
TTGGCGCTGTTTTTGATAGTCTGCGTTGTAGAGACATTCCTAACTTTGAGCTGACCATCCCGCCGATAGACGATCAGCGA
GAAATCGCAATCGTGTTGGATGCCCTCGACGACCGCATCGCTCTCCTACGCGAAATCAACACCACGCTTGAAGCCATCGC
CCAGGCGCTGTTCAAGTCGTGGTTTGTCGATTTCGACCCCGTGCGCGCCAAGATGGAAGGCCGCGTCCCCGAAGGCATGG
ACGAAGCCACAGCGGCGCTATTTCCAGATGGGTTTGAGGAGTCAGAGCTGGGGCTGGTGCCGCGAGGATGGACGGTGGAC
AGGCTTGATACCTGGCTGAGTGTTCTTGAAACAGGACGGCGACCGAAGGGCGGTGTTGGCGGCATTTCCGACGGCGTACC
AAGTATTGGGGCTGAAAGTATTGTGCGTATCGGTCAGTTTGACTTTGGGAAAACCAAGTATGTGTCGCATGATTTTTTTG
CCAACATGAAGTCAGGCGCTTTGATTTCTCACGATGTCTTGCTGTACAAAGATGGTGGTAAGCCGGGTGTTTTTTTGCCA
CGTGTCTCAATGTTTGGTGATGATTTTCCGTTTGAAAGGTGTGGCATTAATGAGCATGTTTTTAGGATGAGACTCAAGGC
ACCTTTCAATCAACCATTTCTATATTTTTGGCTTTGGAGTGATGCCGTAATGCATGAATTGAAGCATCGGGGGGGGAAGG
CGGCAATTCCAGGAATCAACCAGTCTGATGTAAGGGAGCAGGAGCTTTCAGTTCCAAATGCGTCTGTTTTGAACCGATTC
GACGAACTAGTTTCTCCATTGGTCGGCCGGATATTCAGCAATGCAAAGCAAGCCCAAACCCTCGCCACCCTCCGCGACAC
GTTGCTCCCACGCCTGATCTCCGGGCAGTTGCGGCTACTGGAAGTTGAAGACGACATAGTTACTGCTGCCGCCTGA

Upstream 100 bases:

>100_bases
GCCACCAAGATGCAGCAGCTCACTGAAAAGCTGGGTGAGCAGATGGCGAAGGGGGCGGAACTGGATCAGTTGATTCGGCA
AAAGCTGGGGGGGCTGGGGT

Downstream 100 bases:

>100_bases
ACACCCAGGGTTTACACGGCTCTTCGCTCAACAATAATCTGAACATGAGTCAACGCCCCCGCACCATTCAAATTTTTCTG
CCAGCGGGCGATCCGCGAGG

Product: restriction endonuclease S subunits-like protein protein

Products: NA

Alternate protein names: S.MjaXP; Type I restriction enzyme MjaXP specificity protein; S protein [H]

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MSSDVSWQRQTLKAAGISLIDCDHRTPPAANEGYPYIAIPQLKNGHVSLDGVRRISPEDYLEWTKKLKPQTHDVIVVRRC
NSGDSALIPPGLECAIGQNLVILRSDGKTVQPQFLRWLLNGPDWWEQVSKFINVGAVFDSLRCRDIPNFELTIPPIDDQR
EIAIVLDALDDRIALLREINTTLEAIAQALFKSWFVDFDPVRAKMEGRVPEGMDEATAALFPDGFEESELGLVPRGWTVD
RLDTWLSVLETGRRPKGGVGGISDGVPSIGAESIVRIGQFDFGKTKYVSHDFFANMKSGALISHDVLLYKDGGKPGVFLP
RVSMFGDDFPFERCGINEHVFRMRLKAPFNQPFLYFWLWSDAVMHELKHRGGKAAIPGINQSDVREQELSVPNASVLNRF
DELVSPLVGRIFSNAKQAQTLATLRDTLLPRLISGQLRLLEVEDDIVTAAA

Sequences:

>Translated_451_residues
MSSDVSWQRQTLKAAGISLIDCDHRTPPAANEGYPYIAIPQLKNGHVSLDGVRRISPEDYLEWTKKLKPQTHDVIVVRRC
NSGDSALIPPGLECAIGQNLVILRSDGKTVQPQFLRWLLNGPDWWEQVSKFINVGAVFDSLRCRDIPNFELTIPPIDDQR
EIAIVLDALDDRIALLREINTTLEAIAQALFKSWFVDFDPVRAKMEGRVPEGMDEATAALFPDGFEESELGLVPRGWTVD
RLDTWLSVLETGRRPKGGVGGISDGVPSIGAESIVRIGQFDFGKTKYVSHDFFANMKSGALISHDVLLYKDGGKPGVFLP
RVSMFGDDFPFERCGINEHVFRMRLKAPFNQPFLYFWLWSDAVMHELKHRGGKAAIPGINQSDVREQELSVPNASVLNRF
DELVSPLVGRIFSNAKQAQTLATLRDTLLPRLISGQLRLLEVEDDIVTAAA
>Mature_450_residues
SSDVSWQRQTLKAAGISLIDCDHRTPPAANEGYPYIAIPQLKNGHVSLDGVRRISPEDYLEWTKKLKPQTHDVIVVRRCN
SGDSALIPPGLECAIGQNLVILRSDGKTVQPQFLRWLLNGPDWWEQVSKFINVGAVFDSLRCRDIPNFELTIPPIDDQRE
IAIVLDALDDRIALLREINTTLEAIAQALFKSWFVDFDPVRAKMEGRVPEGMDEATAALFPDGFEESELGLVPRGWTVDR
LDTWLSVLETGRRPKGGVGGISDGVPSIGAESIVRIGQFDFGKTKYVSHDFFANMKSGALISHDVLLYKDGGKPGVFLPR
VSMFGDDFPFERCGINEHVFRMRLKAPFNQPFLYFWLWSDAVMHELKHRGGKAAIPGINQSDVREQELSVPNASVLNRFD
ELVSPLVGRIFSNAKQAQTLATLRDTLLPRLISGQLRLLEVEDDIVTAAA

Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of bipartite DNA recognition sequence. Subunit S dictates DNA sequences specificity [H]

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I restriction system S methylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 50317; Mature: 50186

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDVSWQRQTLKAAGISLIDCDHRTPPAANEGYPYIAIPQLKNGHVSLDGVRRISPEDY
CCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCEEECCHHCCCHHHH
LEWTKKLKPQTHDVIVVRRCNSGDSALIPPGLECAIGQNLVILRSDGKTVQPQFLRWLLN
HHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCCEEEEECCCCCCCHHHHHHHHC
GPDWWEQVSKFINVGAVFDSLRCRDIPNFELTIPPIDDQREIAIVLDALDDRIALLREIN
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEEEHHHHHHHHHHHHH
TTLEAIAQALFKSWFVDFDPVRAKMEGRVPEGMDEATAALFPDGFEESELGLVPRGWTVD
HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHH
RLDTWLSVLETGRRPKGGVGGISDGVPSIGAESIVRIGQFDFGKTKYVSHDFFANMKSGA
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEECHHHHHCCCCCC
LISHDVLLYKDGGKPGVFLPRVSMFGDDFPFERCGINEHVFRMRLKAPFNQPFLYFWLWS
EEECEEEEEECCCCCCEEECCHHHCCCCCCHHHCCCCHHHHHEEECCCCCCCEEEEEEHH
DAVMHELKHRGGKAAIPGINQSDVREQELSVPNASVLNRFDELVSPLVGRIFSNAKQAQT
HHHHHHHHHCCCCEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LATLRDTLLPRLISGQLRLLEVEDDIVTAAA
HHHHHHHHHHHHHCCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
SSDVSWQRQTLKAAGISLIDCDHRTPPAANEGYPYIAIPQLKNGHVSLDGVRRISPEDY
CCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCEEECCHHCCCHHHH
LEWTKKLKPQTHDVIVVRRCNSGDSALIPPGLECAIGQNLVILRSDGKTVQPQFLRWLLN
HHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCCEEEEECCCCCCCHHHHHHHHC
GPDWWEQVSKFINVGAVFDSLRCRDIPNFELTIPPIDDQREIAIVLDALDDRIALLREIN
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEEEHHHHHHHHHHHHH
TTLEAIAQALFKSWFVDFDPVRAKMEGRVPEGMDEATAALFPDGFEESELGLVPRGWTVD
HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHH
RLDTWLSVLETGRRPKGGVGGISDGVPSIGAESIVRIGQFDFGKTKYVSHDFFANMKSGA
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEECHHHHHCCCCCC
LISHDVLLYKDGGKPGVFLPRVSMFGDDFPFERCGINEHVFRMRLKAPFNQPFLYFWLWS
EEECEEEEEECCCCCCEEECCHHHCCCCCCHHHCCCCHHHHHEEECCCCCCCEEEEEEHH
DAVMHELKHRGGKAAIPGINQSDVREQELSVPNASVLNRFDELVSPLVGRIFSNAKQAQT
HHHHHHHHHCCCCEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LATLRDTLLPRLISGQLRLLEVEDDIVTAAA
HHHHHHHHHHHHHCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]