| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787819
Identifier: 91787819
GI number: 91787819
Start: 2003512
End: 2004438
Strand: Direct
Name: 91787819
Synonym: Bpro_1942
Alternate gene names: NA
Gene position: 2003512-2004438 (Clockwise)
Preceding gene: 91787818
Following gene: 91787820
Centisome position: 38.53
GC content: 58.47
Gene sequence:
>927_bases ATGAGTCAACGCCCCCGCACCATTCAAATTTTTCTGCCAGCGGGCGATCCGCGAGGTATTCGCGTAGCGGCGCTGACGAC AAGTATTGTGCAGGTGATCGAGGTACCCAGGCCGCTACTGCCGGAGTTCCTTCTGATGCCTGAATCACGGCAGGTCGGCG TCTATTACCTGATCGGCGACGACGAAGAAAAAGACCAGTTGTCTGTTTATGTCGGGCAAACTGGGGCCTTGGGCAAGCGG CTCAATGAGCACGACCTTGACCCGAAGCGCGAGTTTTGGAACCGTGCGCTGGTCGCGATATCGCTGACACACAGCCTGAC ACAGACGCATGCGATGTATCTGGAGTGGCGCAGCATCCTGCAAGCCAACGCGGCTCAGCGTTATTCGGTTGAAAACGGGA ACGCCGGGACAAAGCCTCACACGCCAGCCTGGCTGGAAGCGGATTGCCAGGAAATTTTCGACACCATTCGCACGCTGGTC GCGACCATGGGCCAGCCGATCTTTGAGCCGTTTGCTCTTCGGCAGAGCACCCTGGAGGACAGCGGGGCCCCTGTGACTGC CATTGCGCAGGCCGATTCACCGGTTTTGCTTCGATGCAAAGGCGCTGGCAGCGACGCGACGGGCCAATACACCGAAGAGG GAATGGTGGTTCTCAAGGGCTCCCGCGGCCGATTTGAAGTTGCTAAAAGCATGATCCCGATGTCTGCAGGAAAGCACCGG CAGCGCTTGATTGATGCAGGTGATCTTAAGATCGAAGACGAGGCCTACGTGTTTCAGCGGGACGTGCTGTTCCGGTCGCC CAGTGGAGCTTCAGATGTGGTGCTTGGGCGGAGTTCCAACGGCTGGATGGAATGGAAAGACGCAGCTGGGAAAACGCTGG ATGAGTTGAAGCGCCAGAAGGTTGTGGCCTCGGGCGCCTTGGCATGA
Upstream 100 bases:
>100_bases CCGGGCAGTTGCGGCTACTGGAAGTTGAAGACGACATAGTTACTGCTGCCGCCTGAACACCCAGGGTTTACACGGCTCTT CGCTCAACAATAATCTGAAC
Downstream 100 bases:
>100_bases AGTGCAGAAGGTGTTGGAGGATCTGGGCATCGTGACCGAGCTGACTGGACAGAAGAAAAACCGCAGCTTCAGTTATCAGC CATACATCGAACTGATGACG
Product: hypothetical protein
Products: NA
Alternate protein names: Peptide-Methionine-S-Oxide Reductase
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MSQRPRTIQIFLPAGDPRGIRVAALTTSIVQVIEVPRPLLPEFLLMPESRQVGVYYLIGDDEEKDQLSVYVGQTGALGKR LNEHDLDPKREFWNRALVAISLTHSLTQTHAMYLEWRSILQANAAQRYSVENGNAGTKPHTPAWLEADCQEIFDTIRTLV ATMGQPIFEPFALRQSTLEDSGAPVTAIAQADSPVLLRCKGAGSDATGQYTEEGMVVLKGSRGRFEVAKSMIPMSAGKHR QRLIDAGDLKIEDEAYVFQRDVLFRSPSGASDVVLGRSSNGWMEWKDAAGKTLDELKRQKVVASGALA
Sequences:
>Translated_308_residues MSQRPRTIQIFLPAGDPRGIRVAALTTSIVQVIEVPRPLLPEFLLMPESRQVGVYYLIGDDEEKDQLSVYVGQTGALGKR LNEHDLDPKREFWNRALVAISLTHSLTQTHAMYLEWRSILQANAAQRYSVENGNAGTKPHTPAWLEADCQEIFDTIRTLV ATMGQPIFEPFALRQSTLEDSGAPVTAIAQADSPVLLRCKGAGSDATGQYTEEGMVVLKGSRGRFEVAKSMIPMSAGKHR QRLIDAGDLKIEDEAYVFQRDVLFRSPSGASDVVLGRSSNGWMEWKDAAGKTLDELKRQKVVASGALA >Mature_307_residues SQRPRTIQIFLPAGDPRGIRVAALTTSIVQVIEVPRPLLPEFLLMPESRQVGVYYLIGDDEEKDQLSVYVGQTGALGKRL NEHDLDPKREFWNRALVAISLTHSLTQTHAMYLEWRSILQANAAQRYSVENGNAGTKPHTPAWLEADCQEIFDTIRTLVA TMGQPIFEPFALRQSTLEDSGAPVTAIAQADSPVLLRCKGAGSDATGQYTEEGMVVLKGSRGRFEVAKSMIPMSAGKHRQ RLIDAGDLKIEDEAYVFQRDVLFRSPSGASDVVLGRSSNGWMEWKDAAGKTLDELKRQKVVASGALA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33924; Mature: 33793
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRPRTIQIFLPAGDPRGIRVAALTTSIVQVIEVPRPLLPEFLLMPESRQVGVYYLIGD CCCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEEECC DEEKDQLSVYVGQTGALGKRLNEHDLDPKREFWNRALVAISLTHSLTQTHAMYLEWRSIL CCCCCEEEEEECCCCHHHCCCCCCCCCHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHH QANAAQRYSVENGNAGTKPHTPAWLEADCQEIFDTIRTLVATMGQPIFEPFALRQSTLED HHCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC SGAPVTAIAQADSPVLLRCKGAGSDATGQYTEEGMVVLKGSRGRFEVAKSMIPMSAGKHR CCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCHHH QRLIDAGDLKIEDEAYVFQRDVLFRSPSGASDVVLGRSSNGWMEWKDAAGKTLDELKRQK HHHCCCCCEEECCCHHEEEEHHEEECCCCCCCEEEECCCCCCEEEHHHCCCHHHHHHHHH VVASGALA HHHCCCCC >Mature Secondary Structure SQRPRTIQIFLPAGDPRGIRVAALTTSIVQVIEVPRPLLPEFLLMPESRQVGVYYLIGD CCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEEECC DEEKDQLSVYVGQTGALGKRLNEHDLDPKREFWNRALVAISLTHSLTQTHAMYLEWRSIL CCCCCEEEEEECCCCHHHCCCCCCCCCHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHH QANAAQRYSVENGNAGTKPHTPAWLEADCQEIFDTIRTLVATMGQPIFEPFALRQSTLED HHCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC SGAPVTAIAQADSPVLLRCKGAGSDATGQYTEEGMVVLKGSRGRFEVAKSMIPMSAGKHR CCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCHHH QRLIDAGDLKIEDEAYVFQRDVLFRSPSGASDVVLGRSSNGWMEWKDAAGKTLDELKRQK HHHCCCCCEEECCCHHEEEEHHEEECCCCCCCEEEECCCCCCEEEHHHCCCHHHHHHHHH VVASGALA HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA