Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787813

Identifier: 91787813

GI number: 91787813

Start: 1996130

End: 1996771

Strand: Reverse

Name: 91787813

Synonym: Bpro_1936

Alternate gene names: NA

Gene position: 1996771-1996130 (Counterclockwise)

Preceding gene: 91787824

Following gene: 91787812

Centisome position: 38.4

GC content: 55.76

Gene sequence:

>642_bases
TTGACAATGTCATTGATTTGTTTATTAAAATTTGACAATGTCGAAAATGCTACTAAACTTGCGTCCAACGACGTAAGGAG
TGCATTTATGCGCGATGACCTTCACCACTCGCTACCGCAAACCAGTCTCTGGCGAGCCGCCGTGAAAGCGGCTTGCTCCC
CCGGCTGGGATGGAACCCTTAGAGATGCCATTACGCGGGCTGTCTGGGCCTCGGGCGCAGCTTGGTGGGACACCGCATGG
GAGCAGGAACTGAGGGCTCTCCTCACCGCCAAGGAGTTCGACATGTTTGGCCAGGAAAGACTGGAAAGGAGCCTGGTGAA
ACTGGAGAACACTAGCCCTGACCATTCTGCACAGCGAGTCTGTGAAATTGCTCGAGCGGTAATCTTGAACGCCGAGCCCA
GTCTCAACCTCTATAAGCAGGTCATCCACTCCGCTCTTGAGACCCACGCCGAGGACTGCTTCGAGCATGTTGCTGCGCGA
ATCGAGGCAGAACATCCAGAATATCAAGCAAGGGAAGTACGGCGACGCATGCGCGCTGAGCTTCCGAGCTGCAACTTATC
GGAGCCCCCTGCACCGAAGCCGCGCCAGCGACGCAAGTCCGTCGAGCAGGCGCTCGACATGGCCTTACCAACTAACTTCT
GA

Upstream 100 bases:

>100_bases
TTCGCCTGCCAGTCGCCAAAGCCAACTCCTCTCTCAACGCCGAAATGCCAGCCGAGGACGCCTCCCAGCACGCTGATGAC
CTGGTCCGTTCGCAGGCATA

Downstream 100 bases:

>100_bases
GCCATGAACACCCAACTGCAGGAATCCCATTCACCCGCGGCTAGCTGCTCGGTGCTGCTTTACGAGCACAGGGCACCGCG
CCGCGCCAACAATTCCATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MTMSLICLLKFDNVENATKLASNDVRSAFMRDDLHHSLPQTSLWRAAVKAACSPGWDGTLRDAITRAVWASGAAWWDTAW
EQELRALLTAKEFDMFGQERLERSLVKLENTSPDHSAQRVCEIARAVILNAEPSLNLYKQVIHSALETHAEDCFEHVAAR
IEAEHPEYQAREVRRRMRAELPSCNLSEPPAPKPRQRRKSVEQALDMALPTNF

Sequences:

>Translated_213_residues
MTMSLICLLKFDNVENATKLASNDVRSAFMRDDLHHSLPQTSLWRAAVKAACSPGWDGTLRDAITRAVWASGAAWWDTAW
EQELRALLTAKEFDMFGQERLERSLVKLENTSPDHSAQRVCEIARAVILNAEPSLNLYKQVIHSALETHAEDCFEHVAAR
IEAEHPEYQAREVRRRMRAELPSCNLSEPPAPKPRQRRKSVEQALDMALPTNF
>Mature_212_residues
TMSLICLLKFDNVENATKLASNDVRSAFMRDDLHHSLPQTSLWRAAVKAACSPGWDGTLRDAITRAVWASGAAWWDTAWE
QELRALLTAKEFDMFGQERLERSLVKLENTSPDHSAQRVCEIARAVILNAEPSLNLYKQVIHSALETHAEDCFEHVAARI
EAEHPEYQAREVRRRMRAELPSCNLSEPPAPKPRQRRKSVEQALDMALPTNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24192; Mature: 24060

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMSLICLLKFDNVENATKLASNDVRSAFMRDDLHHSLPQTSLWRAAVKAACSPGWDGTL
CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHH
RDAITRAVWASGAAWWDTAWEQELRALLTAKEFDMFGQERLERSLVKLENTSPDHSAQRV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
CEIARAVILNAEPSLNLYKQVIHSALETHAEDCFEHVAARIEAEHPEYQAREVRRRMRAE
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LPSCNLSEPPAPKPRQRRKSVEQALDMALPTNF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TMSLICLLKFDNVENATKLASNDVRSAFMRDDLHHSLPQTSLWRAAVKAACSPGWDGTL
CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHH
RDAITRAVWASGAAWWDTAWEQELRALLTAKEFDMFGQERLERSLVKLENTSPDHSAQRV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
CEIARAVILNAEPSLNLYKQVIHSALETHAEDCFEHVAARIEAEHPEYQAREVRRRMRAE
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LPSCNLSEPPAPKPRQRRKSVEQALDMALPTNF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA