| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787813
Identifier: 91787813
GI number: 91787813
Start: 1996130
End: 1996771
Strand: Reverse
Name: 91787813
Synonym: Bpro_1936
Alternate gene names: NA
Gene position: 1996771-1996130 (Counterclockwise)
Preceding gene: 91787824
Following gene: 91787812
Centisome position: 38.4
GC content: 55.76
Gene sequence:
>642_bases TTGACAATGTCATTGATTTGTTTATTAAAATTTGACAATGTCGAAAATGCTACTAAACTTGCGTCCAACGACGTAAGGAG TGCATTTATGCGCGATGACCTTCACCACTCGCTACCGCAAACCAGTCTCTGGCGAGCCGCCGTGAAAGCGGCTTGCTCCC CCGGCTGGGATGGAACCCTTAGAGATGCCATTACGCGGGCTGTCTGGGCCTCGGGCGCAGCTTGGTGGGACACCGCATGG GAGCAGGAACTGAGGGCTCTCCTCACCGCCAAGGAGTTCGACATGTTTGGCCAGGAAAGACTGGAAAGGAGCCTGGTGAA ACTGGAGAACACTAGCCCTGACCATTCTGCACAGCGAGTCTGTGAAATTGCTCGAGCGGTAATCTTGAACGCCGAGCCCA GTCTCAACCTCTATAAGCAGGTCATCCACTCCGCTCTTGAGACCCACGCCGAGGACTGCTTCGAGCATGTTGCTGCGCGA ATCGAGGCAGAACATCCAGAATATCAAGCAAGGGAAGTACGGCGACGCATGCGCGCTGAGCTTCCGAGCTGCAACTTATC GGAGCCCCCTGCACCGAAGCCGCGCCAGCGACGCAAGTCCGTCGAGCAGGCGCTCGACATGGCCTTACCAACTAACTTCT GA
Upstream 100 bases:
>100_bases TTCGCCTGCCAGTCGCCAAAGCCAACTCCTCTCTCAACGCCGAAATGCCAGCCGAGGACGCCTCCCAGCACGCTGATGAC CTGGTCCGTTCGCAGGCATA
Downstream 100 bases:
>100_bases GCCATGAACACCCAACTGCAGGAATCCCATTCACCCGCGGCTAGCTGCTCGGTGCTGCTTTACGAGCACAGGGCACCGCG CCGCGCCAACAATTCCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MTMSLICLLKFDNVENATKLASNDVRSAFMRDDLHHSLPQTSLWRAAVKAACSPGWDGTLRDAITRAVWASGAAWWDTAW EQELRALLTAKEFDMFGQERLERSLVKLENTSPDHSAQRVCEIARAVILNAEPSLNLYKQVIHSALETHAEDCFEHVAAR IEAEHPEYQAREVRRRMRAELPSCNLSEPPAPKPRQRRKSVEQALDMALPTNF
Sequences:
>Translated_213_residues MTMSLICLLKFDNVENATKLASNDVRSAFMRDDLHHSLPQTSLWRAAVKAACSPGWDGTLRDAITRAVWASGAAWWDTAW EQELRALLTAKEFDMFGQERLERSLVKLENTSPDHSAQRVCEIARAVILNAEPSLNLYKQVIHSALETHAEDCFEHVAAR IEAEHPEYQAREVRRRMRAELPSCNLSEPPAPKPRQRRKSVEQALDMALPTNF >Mature_212_residues TMSLICLLKFDNVENATKLASNDVRSAFMRDDLHHSLPQTSLWRAAVKAACSPGWDGTLRDAITRAVWASGAAWWDTAWE QELRALLTAKEFDMFGQERLERSLVKLENTSPDHSAQRVCEIARAVILNAEPSLNLYKQVIHSALETHAEDCFEHVAARI EAEHPEYQAREVRRRMRAELPSCNLSEPPAPKPRQRRKSVEQALDMALPTNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24192; Mature: 24060
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMSLICLLKFDNVENATKLASNDVRSAFMRDDLHHSLPQTSLWRAAVKAACSPGWDGTL CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHH RDAITRAVWASGAAWWDTAWEQELRALLTAKEFDMFGQERLERSLVKLENTSPDHSAQRV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH CEIARAVILNAEPSLNLYKQVIHSALETHAEDCFEHVAARIEAEHPEYQAREVRRRMRAE HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LPSCNLSEPPAPKPRQRRKSVEQALDMALPTNF CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TMSLICLLKFDNVENATKLASNDVRSAFMRDDLHHSLPQTSLWRAAVKAACSPGWDGTL CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHH RDAITRAVWASGAAWWDTAWEQELRALLTAKEFDMFGQERLERSLVKLENTSPDHSAQRV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH CEIARAVILNAEPSLNLYKQVIHSALETHAEDCFEHVAARIEAEHPEYQAREVRRRMRAE HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LPSCNLSEPPAPKPRQRRKSVEQALDMALPTNF CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA