| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is iolI [H]
Identifier: 91787733
GI number: 91787733
Start: 1915526
End: 1916419
Strand: Direct
Name: iolI [H]
Synonym: Bpro_1854
Alternate gene names: 91787733
Gene position: 1915526-1916419 (Clockwise)
Preceding gene: 91787732
Following gene: 91787734
Centisome position: 36.84
GC content: 60.63
Gene sequence:
>894_bases ATGAGTCACTACAGCGGAAACATAGACGATTTCGGGATGGACACCATCTCGCTGGCCGGCCCGCTCGAGGCCAAGCTCAA GGCTGTTCGCGAGGCGGGGTTCACCCAGATCATGCTGGCCGCGAGGGACCTGGTGGGCCACCCCGACGGCCTTGACGCCG CGATTGCGGCGGTGCGTACCAGCGGCTTGCGCGTGACCGGCTTTCAGGTGCTGCGCGATTTTGAGGGCCTGTCGGGCCAT CTTCACGATTACAAGGTCGACATTGCCAAATCGATGCTGGAGATGTGCCACGCGCTGGACTGCCGGCTGTTGCTGATCTG TTCATCCACGTCCGTGCATGCCACGGACGACACCCGGGCGCTGGTGAAGGACTTGCGCAAACTGGCCATGCTGGCGATTC CCATGAATATCCGCATAGCCTATGAAGCCTTGTCGTGGGGGCGTGTCGTCAATGAATTCCCACAGGCCTGGGACATCATT TGCGAGGCTGACATGCCCAATCTCGGCCTGGGATTTGACTCCTTCCACATGTTTGCGACCAAGACCTCGCTGGACGAGCT GGACATGCTGGATCCCGACAAGATATTCCTGGTGCAGCTGGCCGACTTCATGTGGACCGAGATCAAGTCGGTCGAGGAAC GCATTGCCACCGCGCGGCATTTTCGCGTGTTTCCCGGGGAAGGCGTACACAGCGAAGCACTCGCCACGCTGGTGACCAAA CTCCACGGGCTGGGTTACCGCGGTGACTACAGTTTCGAGGTCTTCAATGACGACTACCAGCAAATGCCTTTACCCACCGT GGCGCAACGCGCCTGGCGTTCGGCCTTGTGGCTGGGCGAGGACGTCTTGCGGCGTTCCGTGCCCTTGCCCAACCAGATCC GCCTGAAGCGTTGA
Upstream 100 bases:
>100_bases AGTCGCGCGGCGTTCACACCGAGGACCGCGGCGCCTTGACCAAAACCTGGCTGGGCAGCGTGAGCTTTGAGCTCGTGCAC GACGAGCGCGGTTGAAGATC
Downstream 100 bases:
>100_bases AGGCCTGTTAATTCACTTTTATGACCCCTGACATCGCATGAGCAGCATTTTTGAAGGTTTCCTGTCCACGTCCGAAATCC TGGAGGCGTTCAGTGAGCGC
Product: xylose isomerase-like protein TIM barrel
Products: homogentisate; CO2
Alternate protein names: 2-keto-myo-inositol isomerase; 2KMI isomerase [H]
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSHYSGNIDDFGMDTISLAGPLEAKLKAVREAGFTQIMLAARDLVGHPDGLDAAIAAVRTSGLRVTGFQVLRDFEGLSGH LHDYKVDIAKSMLEMCHALDCRLLLICSSTSVHATDDTRALVKDLRKLAMLAIPMNIRIAYEALSWGRVVNEFPQAWDII CEADMPNLGLGFDSFHMFATKTSLDELDMLDPDKIFLVQLADFMWTEIKSVEERIATARHFRVFPGEGVHSEALATLVTK LHGLGYRGDYSFEVFNDDYQQMPLPTVAQRAWRSALWLGEDVLRRSVPLPNQIRLKR
Sequences:
>Translated_297_residues MSHYSGNIDDFGMDTISLAGPLEAKLKAVREAGFTQIMLAARDLVGHPDGLDAAIAAVRTSGLRVTGFQVLRDFEGLSGH LHDYKVDIAKSMLEMCHALDCRLLLICSSTSVHATDDTRALVKDLRKLAMLAIPMNIRIAYEALSWGRVVNEFPQAWDII CEADMPNLGLGFDSFHMFATKTSLDELDMLDPDKIFLVQLADFMWTEIKSVEERIATARHFRVFPGEGVHSEALATLVTK LHGLGYRGDYSFEVFNDDYQQMPLPTVAQRAWRSALWLGEDVLRRSVPLPNQIRLKR >Mature_296_residues SHYSGNIDDFGMDTISLAGPLEAKLKAVREAGFTQIMLAARDLVGHPDGLDAAIAAVRTSGLRVTGFQVLRDFEGLSGHL HDYKVDIAKSMLEMCHALDCRLLLICSSTSVHATDDTRALVKDLRKLAMLAIPMNIRIAYEALSWGRVVNEFPQAWDIIC EADMPNLGLGFDSFHMFATKTSLDELDMLDPDKIFLVQLADFMWTEIKSVEERIATARHFRVFPGEGVHSEALATLVTKL HGLGYRGDYSFEVFNDDYQQMPLPTVAQRAWRSALWLGEDVLRRSVPLPNQIRLKR
Specific function: Involved in the reversible interconverion of 2-keto-myo- inositol (2KMI, inosose or 2,4,6/3,5-pentahydroxycyclohexanone) to 1-keto-D-chiro-inositol (1KDCI or 2,3,5/4,6- pentahydroxycyclohexanone) [H]
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iolI family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: 1.13.11.27
Molecular weight: Translated: 33282; Mature: 33151
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHYSGNIDDFGMDTISLAGPLEAKLKAVREAGFTQIMLAARDLVGHPDGLDAAIAAVRT CCCCCCCCCCCCCCCEECCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHH SGLRVTGFQVLRDFEGLSGHLHDYKVDIAKSMLEMCHALDCRLLLICSSTSVHATDDTRA CCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHH LVKDLRKLAMLAIPMNIRIAYEALSWGRVVNEFPQAWDIICEADMPNLGLGFDSFHMFAT HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCHHHHHEEECCCCCCCCCCCHHHHHEEE KTSLDELDMLDPDKIFLVQLADFMWTEIKSVEERIATARHFRVFPGEGVHSEALATLVTK CCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHH LHGLGYRGDYSFEVFNDDYQQMPLPTVAQRAWRSALWLGEDVLRRSVPLPNQIRLKR HHCCCCCCCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECC >Mature Secondary Structure SHYSGNIDDFGMDTISLAGPLEAKLKAVREAGFTQIMLAARDLVGHPDGLDAAIAAVRT CCCCCCCCCCCCCCEECCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHH SGLRVTGFQVLRDFEGLSGHLHDYKVDIAKSMLEMCHALDCRLLLICSSTSVHATDDTRA CCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHH LVKDLRKLAMLAIPMNIRIAYEALSWGRVVNEFPQAWDIICEADMPNLGLGFDSFHMFAT HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCHHHHHEEECCCCCCCCCCCHHHHHEEE KTSLDELDMLDPDKIFLVQLADFMWTEIKSVEERIATARHFRVFPGEGVHSEALATLVTK CCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHH LHGLGYRGDYSFEVFNDDYQQMPLPTVAQRAWRSALWLGEDVLRRSVPLPNQIRLKR HHCCCCCCCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-hydroxyphenylpyruvate; O2
Specific reaction: 4-hydroxyphenylpyruvate + O2 = homogentisate + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA