Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787697

Identifier: 91787697

GI number: 91787697

Start: 1882566

End: 1883546

Strand: Direct

Name: 91787697

Synonym: Bpro_1818

Alternate gene names: NA

Gene position: 1882566-1883546 (Clockwise)

Preceding gene: 91787696

Following gene: 91787698

Centisome position: 36.2

GC content: 63.4

Gene sequence:

>981_bases
ATGCGTTATCTGTCTAACTGCCTCCGCATGCTCGGAGTCGTCGCGCTCATTGCCGCATCCGCAGCCGCTCAAGCCCAAAC
CTGGCCCGAGCGGCCGGTGCGCTTGGTGGTGCCGTTTCCTGCCGGCGGCGCAACCGACCTGGTTGCCAGGGTTATTGCCC
AGCGCGTGTCAAAAGACATCGGGCAGCAAATCGTCGTTGATAACAAGGCCGGTGCGGGCGGCACCATAGGCTCGGCCGAG
GCCGCAAAGGCGACGGCCGATGCCTATACCCTGCTATTGACGACGAGCAGCACGCACGCCATCTCGCCGCACCTCATGCC
CAAGCTGCCCTACGACGCCATCAAGGATTTCACGCCGATTGCGCACCTGGCCGACGCCGCGAGCGTGCTGCTTGTGACAC
CGTCGCTGCCTGTGAAAACGGTGCCCGAGCTGATCGCTTACGCCAAAAAGCATCCTGGCCAACTCAATTACGCCAGCAGC
GGCAATGGCACTATCGTGCATTTGACGACCGAAGCCTTCAAGGCCCAGGCTGGCATTTTTATTACCCACGTGCCTTACAA
GGGCACGGCACTGGCCATTCCCGATGTCATTGCCGGCTCGGTGCCGGTGCTGATCGACTCCATCCCGTCGGGCATGCCGC
ATGTCAAGAGTGGTCGGCTGCGTGCCTTGGCCGTCACCGGAGACAAGCGCTCCGCACTGGCGCCCGAGCTGCCGACCGTG
GCCGAGGCGGGCCTTCCTGGTTTTTCATCCGTGACCTGGTTTGGGCTGTATGCACCGCGCGGCATGAAGGCTGATCTGGT
GGTGCGTGTGCATGAGGCCTTCGCTAAGGCGGCCCACGCGCCCGAGGTGGTGGAAAGCCTGGCCAAACTCGGTGTTGAAC
CCGCCCCACCGGGCACGCCCGCACAGTTCGCCGAGATGGTGTCTGCCGACAGCCAGCGCTGGGCGCGCATCATTCGCGAA
CGCAAGATCACCCTTGAATGA

Upstream 100 bases:

>100_bases
TGCAAATTCTCTTATTGTGGTAATGCTGAAGTCTTCCTAAGATGCTGTCGGACCTGACTTTCCTGGCATCGCTCGCCCCA
CCATTCAAGGAAAATTTCAC

Downstream 100 bases:

>100_bases
AATACACACCCATGCCCATTCCATCCGCCATGGACTTCACGAATCCCTATGCCTCGGCACGTTCTGCCGTGCTGGGGCGC
AACGTTGTCAGTACCTCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MRYLSNCLRMLGVVALIAASAAAQAQTWPERPVRLVVPFPAGGATDLVARVIAQRVSKDIGQQIVVDNKAGAGGTIGSAE
AAKATADAYTLLLTTSSTHAISPHLMPKLPYDAIKDFTPIAHLADAASVLLVTPSLPVKTVPELIAYAKKHPGQLNYASS
GNGTIVHLTTEAFKAQAGIFITHVPYKGTALAIPDVIAGSVPVLIDSIPSGMPHVKSGRLRALAVTGDKRSALAPELPTV
AEAGLPGFSSVTWFGLYAPRGMKADLVVRVHEAFAKAAHAPEVVESLAKLGVEPAPPGTPAQFAEMVSADSQRWARIIRE
RKITLE

Sequences:

>Translated_326_residues
MRYLSNCLRMLGVVALIAASAAAQAQTWPERPVRLVVPFPAGGATDLVARVIAQRVSKDIGQQIVVDNKAGAGGTIGSAE
AAKATADAYTLLLTTSSTHAISPHLMPKLPYDAIKDFTPIAHLADAASVLLVTPSLPVKTVPELIAYAKKHPGQLNYASS
GNGTIVHLTTEAFKAQAGIFITHVPYKGTALAIPDVIAGSVPVLIDSIPSGMPHVKSGRLRALAVTGDKRSALAPELPTV
AEAGLPGFSSVTWFGLYAPRGMKADLVVRVHEAFAKAAHAPEVVESLAKLGVEPAPPGTPAQFAEMVSADSQRWARIIRE
RKITLE
>Mature_326_residues
MRYLSNCLRMLGVVALIAASAAAQAQTWPERPVRLVVPFPAGGATDLVARVIAQRVSKDIGQQIVVDNKAGAGGTIGSAE
AAKATADAYTLLLTTSSTHAISPHLMPKLPYDAIKDFTPIAHLADAASVLLVTPSLPVKTVPELIAYAKKHPGQLNYASS
GNGTIVHLTTEAFKAQAGIFITHVPYKGTALAIPDVIAGSVPVLIDSIPSGMPHVKSGRLRALAVTGDKRSALAPELPTV
AEAGLPGFSSVTWFGLYAPRGMKADLVVRVHEAFAKAAHAPEVVESLAKLGVEPAPPGTPAQFAEMVSADSQRWARIIRE
RKITLE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34159; Mature: 34159

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLSNCLRMLGVVALIAASAAAQAQTWPERPVRLVVPFPAGGATDLVARVIAQRVSKDI
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
GQQIVVDNKAGAGGTIGSAEAAKATADAYTLLLTTSSTHAISPHLMPKLPYDAIKDFTPI
CCEEEEECCCCCCCCCCCCHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHCCHH
AHLADAASVLLVTPSLPVKTVPELIAYAKKHPGQLNYASSGNGTIVHLTTEAFKAQAGIF
HHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEHHHHHCCCCEE
ITHVPYKGTALAIPDVIAGSVPVLIDSIPSGMPHVKSGRLRALAVTGDKRSALAPELPTV
EEECCCCCCEEECCHHHCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHH
AEAGLPGFSSVTWFGLYAPRGMKADLVVRVHEAFAKAAHAPEVVESLAKLGVEPAPPGTP
HHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCH
AQFAEMVSADSQRWARIIRERKITLE
HHHHHHHCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRYLSNCLRMLGVVALIAASAAAQAQTWPERPVRLVVPFPAGGATDLVARVIAQRVSKDI
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
GQQIVVDNKAGAGGTIGSAEAAKATADAYTLLLTTSSTHAISPHLMPKLPYDAIKDFTPI
CCEEEEECCCCCCCCCCCCHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHCCHH
AHLADAASVLLVTPSLPVKTVPELIAYAKKHPGQLNYASSGNGTIVHLTTEAFKAQAGIF
HHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEHHHHHCCCCEE
ITHVPYKGTALAIPDVIAGSVPVLIDSIPSGMPHVKSGRLRALAVTGDKRSALAPELPTV
EEECCCCCCEEECCHHHCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHH
AEAGLPGFSSVTWFGLYAPRGMKADLVVRVHEAFAKAAHAPEVVESLAKLGVEPAPPGTP
HHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCH
AQFAEMVSADSQRWARIIRERKITLE
HHHHHHHCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]