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The map label for this gene is ompA [H]

Identifier: 91787678

GI number: 91787678

Start: 1859401

End: 1860045

Strand: Direct

Name: ompA [H]

Synonym: Bpro_1796

Alternate gene names: 91787678

Gene position: 1859401-1860045 (Clockwise)

Preceding gene: 91787664

Following gene: 91787679

Centisome position: 35.76

GC content: 56.12

Gene sequence:

>645_bases
ATGAAGAAACTCAACAAAGTGGCAATGTTGTTTGCTTCCGCAGCGCTTGTTACCGCCGCTGGTGCACAAACTATCGACAA
CTGGAAAAACGGCAACAATGAGTTGGTCTGGAAAAACGGCACCAATGAACTGTGCTGGCGCGATGCCAACTGGACGCCTG
CTACTGCGGCTCCTGGCTGTGATGGTGCGATCGTTGCTCCTCCTGCTCCCGCTCCTGCCGCCGCCCCCGCGCCTGCCCCT
CGCGCAGCTGCCCCGGCGCCTGCCCCAGTTGCTCCTCCTGCCGCTACCAAAGTTACTTACGCCGCTGACGCATTCTTTGA
TTTCGACAAGTCCGTCATCAAGCCAGAAGGCAAAGCCAAGCTGGATGACCTGATCGGCAAGATCAAGGACATCAACCTGG
AAGTGATCATTGCTGTGGGTCATACCGACTCCGTCGGCAGCGATACTTACAACCAGAAGCTGTCGGTTCGTCGTTCGGAA
GCCGTCAAGGCTTACCTGGTGTCCAAGGGCATTGAGAAAAACCGCGTTTACACCGAAGGCAAAGGCGAGAAACAGCCCGT
TGCTGACAACAAGACCGCCGAAGGCCGCGCGAAAAATCGTCGCGTGGAAATCGAAGTTGTTGGTACCCGTGCCAACAAGA
AGTAA

Upstream 100 bases:

>100_bases
TAGCTGTGGCACAATCGTTGTAACGCTTTGAGTGATGGTCACTCACGGCGTGTAAATCACTAATCGCAGCAAGTCTGCGG
CTTTTCTCTAGAGGAGAACC

Downstream 100 bases:

>100_bases
TCCTCTCGGGATCGCTTAAAAACCGCGCTTCGGCGCGGTTTTTTTATGCCTCAACGATAATTGCGACATGCCTACAAGCC
AAAATTTTGACCCCGCCGAA

Product: OmpA/MotB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKKLNKVAMLFASAALVTAAGAQTIDNWKNGNNELVWKNGTNELCWRDANWTPATAAPGCDGAIVAPPAPAPAAAPAPAP
RAAAPAPAPVAPPAATKVTYAADAFFDFDKSVIKPEGKAKLDDLIGKIKDINLEVIIAVGHTDSVGSDTYNQKLSVRRSE
AVKAYLVSKGIEKNRVYTEGKGEKQPVADNKTAEGRAKNRRVEIEVVGTRANKK

Sequences:

>Translated_214_residues
MKKLNKVAMLFASAALVTAAGAQTIDNWKNGNNELVWKNGTNELCWRDANWTPATAAPGCDGAIVAPPAPAPAAAPAPAP
RAAAPAPAPVAPPAATKVTYAADAFFDFDKSVIKPEGKAKLDDLIGKIKDINLEVIIAVGHTDSVGSDTYNQKLSVRRSE
AVKAYLVSKGIEKNRVYTEGKGEKQPVADNKTAEGRAKNRRVEIEVVGTRANKK
>Mature_214_residues
MKKLNKVAMLFASAALVTAAGAQTIDNWKNGNNELVWKNGTNELCWRDANWTPATAAPGCDGAIVAPPAPAPAAAPAPAP
RAAAPAPAPVAPPAATKVTYAADAFFDFDKSVIKPEGKAKLDDLIGKIKDINLEVIIAVGHTDSVGSDTYNQKLSVRRSE
AVKAYLVSKGIEKNRVYTEGKGEKQPVADNKTAEGRAKNRRVEIEVVGTRANKK

Specific function: Structural protein that may protect the integrity of the bacterium [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=150, Percent_Identity=36.6666666666667, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI48994946, Length=101, Percent_Identity=36.6336633663366, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1788957, Length=95, Percent_Identity=36.8421052631579, Blast_Score=71, Evalue=5e-14,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 22614; Mature: 22614

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLNKVAMLFASAALVTAAGAQTIDNWKNGNNELVWKNGTNELCWRDANWTPATAAPGC
CCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCC
DGAIVAPPAPAPAAAPAPAPRAAAPAPAPVAPPAATKVTYAADAFFDFDKSVIKPEGKAK
CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHCCHHHCCCCCCHH
LDDLIGKIKDINLEVIIAVGHTDSVGSDTYNQKLSVRRSEAVKAYLVSKGIEKNRVYTEG
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECC
KGEKQPVADNKTAEGRAKNRRVEIEVVGTRANKK
CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC
>Mature Secondary Structure
MKKLNKVAMLFASAALVTAAGAQTIDNWKNGNNELVWKNGTNELCWRDANWTPATAAPGC
CCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCC
DGAIVAPPAPAPAAAPAPAPRAAAPAPAPVAPPAATKVTYAADAFFDFDKSVIKPEGKAK
CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHCCHHHCCCCCCHH
LDDLIGKIKDINLEVIIAVGHTDSVGSDTYNQKLSVRRSEAVKAYLVSKGIEKNRVYTEG
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECC
KGEKQPVADNKTAEGRAKNRRVEIEVVGTRANKK
CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1447140 [H]