| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ubiG [H]
Identifier: 91787679
GI number: 91787679
Start: 1860113
End: 1860820
Strand: Direct
Name: ubiG [H]
Synonym: Bpro_1797
Alternate gene names: 91787679
Gene position: 1860113-1860820 (Clockwise)
Preceding gene: 91787678
Following gene: 91787680
Centisome position: 35.77
GC content: 59.75
Gene sequence:
>708_bases ATGCCTACAAGCCAAAATTTTGACCCCGCCGAACTGGCCAAGTTCTCTGATCTGGCCCATCGCTGGTGGGATACTGAAAG CGAATTCCGTCCCTTGCACCAGATCAACCCCTTGCGGCTTGACTGGATTGAGGGGCAGGCCCCATTGAAGGGCCAGCGCG TACTGGACGTGGGCTGTGGCGGCGGCATCCTGGCCGATGCCATGGCCCGCAAAGGCGCCGACGTGCTCGGGATTGATCTG GCCACCAAAGCGCTCAAGGTCGCCCAGCTTCATGCCCTGGAGGCCCAGACCGAGGGTGTCGAGTACCGCGAAATCAGCGC CGAAGCACTGGCTGCCGAGCAGCCTGCCAGTTTTGACGTGGTGACCTGCATGGAAATGCTTGAGCATGTGCCGAATCCGG CTTCCGTTGTGAAGGCCTGCGCCGCCCTGGTCAAACCCGGAGGGCATGTATTTTTTTCGACCATCAACCGTAATGCGAAG GCCTTTCTGTTTGCCATCGTGGGGGCGGAGTATGTGCTGAACCTGCTGCCGCGTGGAACCCATGAATACGCCAAGCTGAT CAAGCCCAGCGAACTGGCTGGCTATTGCCGGACCAACGGGCTCACATTGCAGCAGACCAGGGGGATGGAGTACAACCCCT TGACCCAGCATTACTGGCTCAGCGCCGACACCAGCGTCAACTACCTGCTGGCGACCCAGAAAATCTGA
Upstream 100 bases:
>100_bases GAAGTTGTTGGTACCCGTGCCAACAAGAAGTAATCCTCTCGGGATCGCTTAAAAACCGCGCTTCGGCGCGGTTTTTTTAT GCCTCAACGATAATTGCGAC
Downstream 100 bases:
>100_bases GCAAGGCCGGTGACTACCATGTTTAATAATATTGATGCCGTGCTGTTTGACCTGGACGGTACCCTGATTGATAGCGCACC CGACCTGGGGGCCGCGGCCG
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MPTSQNFDPAELAKFSDLAHRWWDTESEFRPLHQINPLRLDWIEGQAPLKGQRVLDVGCGGGILADAMARKGADVLGIDL ATKALKVAQLHALEAQTEGVEYREISAEALAAEQPASFDVVTCMEMLEHVPNPASVVKACAALVKPGGHVFFSTINRNAK AFLFAIVGAEYVLNLLPRGTHEYAKLIKPSELAGYCRTNGLTLQQTRGMEYNPLTQHYWLSADTSVNYLLATQKI
Sequences:
>Translated_235_residues MPTSQNFDPAELAKFSDLAHRWWDTESEFRPLHQINPLRLDWIEGQAPLKGQRVLDVGCGGGILADAMARKGADVLGIDL ATKALKVAQLHALEAQTEGVEYREISAEALAAEQPASFDVVTCMEMLEHVPNPASVVKACAALVKPGGHVFFSTINRNAK AFLFAIVGAEYVLNLLPRGTHEYAKLIKPSELAGYCRTNGLTLQQTRGMEYNPLTQHYWLSADTSVNYLLATQKI >Mature_234_residues PTSQNFDPAELAKFSDLAHRWWDTESEFRPLHQINPLRLDWIEGQAPLKGQRVLDVGCGGGILADAMARKGADVLGIDLA TKALKVAQLHALEAQTEGVEYREISAEALAAEQPASFDVVTCMEMLEHVPNPASVVKACAALVKPGGHVFFSTINRNAKA FLFAIVGAEYVLNLLPRGTHEYAKLIKPSELAGYCRTNGLTLQQTRGMEYNPLTQHYWLSADTSVNYLLATQKI
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
Organism=Homo sapiens, GI118600965, Length=240, Percent_Identity=36.6666666666667, Blast_Score=177, Evalue=1e-44, Organism=Escherichia coli, GI1788564, Length=233, Percent_Identity=54.9356223175966, Blast_Score=269, Evalue=1e-73, Organism=Caenorhabditis elegans, GI115533050, Length=234, Percent_Identity=33.3333333333333, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6324476, Length=278, Percent_Identity=32.3741007194245, Blast_Score=125, Evalue=5e-30, Organism=Drosophila melanogaster, GI281365311, Length=208, Percent_Identity=33.1730769230769, Blast_Score=120, Evalue=6e-28, Organism=Drosophila melanogaster, GI24585589, Length=208, Percent_Identity=33.1730769230769, Blast_Score=120, Evalue=6e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 25806; Mature: 25675
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSQNFDPAELAKFSDLAHRWWDTESEFRPLHQINPLRLDWIEGQAPLKGQRVLDVGCG CCCCCCCCHHHHHHHHHHHHHHCCCCHHCCHHHCCCCEEEEEECCCCCCCCCEEEEECCC GGILADAMARKGADVLGIDLATKALKVAQLHALEAQTEGVEYREISAEALAAEQPASFDV CHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHH VTCMEMLEHVPNPASVVKACAALVKPGGHVFFSTINRNAKAFLFAIVGAEYVLNLLPRGT HHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCH HEYAKLIKPSELAGYCRTNGLTLQQTRGMEYNPLTQHYWLSADTSVNYLLATQKI HHHHHHCCCHHHHHHHHCCCEEEHHCCCCCCCCCCCEEEEECCCCCEEEEEECCC >Mature Secondary Structure PTSQNFDPAELAKFSDLAHRWWDTESEFRPLHQINPLRLDWIEGQAPLKGQRVLDVGCG CCCCCCCHHHHHHHHHHHHHHCCCCHHCCHHHCCCCEEEEEECCCCCCCCCEEEEECCC GGILADAMARKGADVLGIDLATKALKVAQLHALEAQTEGVEYREISAEALAAEQPASFDV CHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHH VTCMEMLEHVPNPASVVKACAALVKPGGHVFFSTINRNAKAFLFAIVGAEYVLNLLPRGT HHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCH HEYAKLIKPSELAGYCRTNGLTLQQTRGMEYNPLTQHYWLSADTSVNYLLATQKI HHHHHHCCCHHHHHHHHCCCEEEHHCCCCCCCCCCCEEEEECCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA