Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ubiG [H]

Identifier: 91787679

GI number: 91787679

Start: 1860113

End: 1860820

Strand: Direct

Name: ubiG [H]

Synonym: Bpro_1797

Alternate gene names: 91787679

Gene position: 1860113-1860820 (Clockwise)

Preceding gene: 91787678

Following gene: 91787680

Centisome position: 35.77

GC content: 59.75

Gene sequence:

>708_bases
ATGCCTACAAGCCAAAATTTTGACCCCGCCGAACTGGCCAAGTTCTCTGATCTGGCCCATCGCTGGTGGGATACTGAAAG
CGAATTCCGTCCCTTGCACCAGATCAACCCCTTGCGGCTTGACTGGATTGAGGGGCAGGCCCCATTGAAGGGCCAGCGCG
TACTGGACGTGGGCTGTGGCGGCGGCATCCTGGCCGATGCCATGGCCCGCAAAGGCGCCGACGTGCTCGGGATTGATCTG
GCCACCAAAGCGCTCAAGGTCGCCCAGCTTCATGCCCTGGAGGCCCAGACCGAGGGTGTCGAGTACCGCGAAATCAGCGC
CGAAGCACTGGCTGCCGAGCAGCCTGCCAGTTTTGACGTGGTGACCTGCATGGAAATGCTTGAGCATGTGCCGAATCCGG
CTTCCGTTGTGAAGGCCTGCGCCGCCCTGGTCAAACCCGGAGGGCATGTATTTTTTTCGACCATCAACCGTAATGCGAAG
GCCTTTCTGTTTGCCATCGTGGGGGCGGAGTATGTGCTGAACCTGCTGCCGCGTGGAACCCATGAATACGCCAAGCTGAT
CAAGCCCAGCGAACTGGCTGGCTATTGCCGGACCAACGGGCTCACATTGCAGCAGACCAGGGGGATGGAGTACAACCCCT
TGACCCAGCATTACTGGCTCAGCGCCGACACCAGCGTCAACTACCTGCTGGCGACCCAGAAAATCTGA

Upstream 100 bases:

>100_bases
GAAGTTGTTGGTACCCGTGCCAACAAGAAGTAATCCTCTCGGGATCGCTTAAAAACCGCGCTTCGGCGCGGTTTTTTTAT
GCCTCAACGATAATTGCGAC

Downstream 100 bases:

>100_bases
GCAAGGCCGGTGACTACCATGTTTAATAATATTGATGCCGTGCTGTTTGACCTGGACGGTACCCTGATTGATAGCGCACC
CGACCTGGGGGCCGCGGCCG

Product: 3-demethylubiquinone-9 3-methyltransferase

Products: NA

Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MPTSQNFDPAELAKFSDLAHRWWDTESEFRPLHQINPLRLDWIEGQAPLKGQRVLDVGCGGGILADAMARKGADVLGIDL
ATKALKVAQLHALEAQTEGVEYREISAEALAAEQPASFDVVTCMEMLEHVPNPASVVKACAALVKPGGHVFFSTINRNAK
AFLFAIVGAEYVLNLLPRGTHEYAKLIKPSELAGYCRTNGLTLQQTRGMEYNPLTQHYWLSADTSVNYLLATQKI

Sequences:

>Translated_235_residues
MPTSQNFDPAELAKFSDLAHRWWDTESEFRPLHQINPLRLDWIEGQAPLKGQRVLDVGCGGGILADAMARKGADVLGIDL
ATKALKVAQLHALEAQTEGVEYREISAEALAAEQPASFDVVTCMEMLEHVPNPASVVKACAALVKPGGHVFFSTINRNAK
AFLFAIVGAEYVLNLLPRGTHEYAKLIKPSELAGYCRTNGLTLQQTRGMEYNPLTQHYWLSADTSVNYLLATQKI
>Mature_234_residues
PTSQNFDPAELAKFSDLAHRWWDTESEFRPLHQINPLRLDWIEGQAPLKGQRVLDVGCGGGILADAMARKGADVLGIDLA
TKALKVAQLHALEAQTEGVEYREISAEALAAEQPASFDVVTCMEMLEHVPNPASVVKACAALVKPGGHVFFSTINRNAKA
FLFAIVGAEYVLNLLPRGTHEYAKLIKPSELAGYCRTNGLTLQQTRGMEYNPLTQHYWLSADTSVNYLLATQKI

Specific function: Ubiquinone biosynthesis. [C]

COG id: COG2227

COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]

Homologues:

Organism=Homo sapiens, GI118600965, Length=240, Percent_Identity=36.6666666666667, Blast_Score=177, Evalue=1e-44,
Organism=Escherichia coli, GI1788564, Length=233, Percent_Identity=54.9356223175966, Blast_Score=269, Evalue=1e-73,
Organism=Caenorhabditis elegans, GI115533050, Length=234, Percent_Identity=33.3333333333333, Blast_Score=128, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6324476, Length=278, Percent_Identity=32.3741007194245, Blast_Score=125, Evalue=5e-30,
Organism=Drosophila melanogaster, GI281365311, Length=208, Percent_Identity=33.1730769230769, Blast_Score=120, Evalue=6e-28,
Organism=Drosophila melanogaster, GI24585589, Length=208, Percent_Identity=33.1730769230769, Blast_Score=120, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR010233 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: =2.1.1.64 [H]

Molecular weight: Translated: 25806; Mature: 25675

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTSQNFDPAELAKFSDLAHRWWDTESEFRPLHQINPLRLDWIEGQAPLKGQRVLDVGCG
CCCCCCCCHHHHHHHHHHHHHHCCCCHHCCHHHCCCCEEEEEECCCCCCCCCEEEEECCC
GGILADAMARKGADVLGIDLATKALKVAQLHALEAQTEGVEYREISAEALAAEQPASFDV
CHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHH
VTCMEMLEHVPNPASVVKACAALVKPGGHVFFSTINRNAKAFLFAIVGAEYVLNLLPRGT
HHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCH
HEYAKLIKPSELAGYCRTNGLTLQQTRGMEYNPLTQHYWLSADTSVNYLLATQKI
HHHHHHCCCHHHHHHHHCCCEEEHHCCCCCCCCCCCEEEEECCCCCEEEEEECCC
>Mature Secondary Structure 
PTSQNFDPAELAKFSDLAHRWWDTESEFRPLHQINPLRLDWIEGQAPLKGQRVLDVGCG
CCCCCCCHHHHHHHHHHHHHHCCCCHHCCHHHCCCCEEEEEECCCCCCCCCEEEEECCC
GGILADAMARKGADVLGIDLATKALKVAQLHALEAQTEGVEYREISAEALAAEQPASFDV
CHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHH
VTCMEMLEHVPNPASVVKACAALVKPGGHVFFSTINRNAKAFLFAIVGAEYVLNLLPRGT
HHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCH
HEYAKLIKPSELAGYCRTNGLTLQQTRGMEYNPLTQHYWLSADTSVNYLLATQKI
HHHHHHCCCHHHHHHHHCCCEEEHHCCCCCCCCCCCEEEEECCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA