| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787664
Identifier: 91787664
GI number: 91787664
Start: 1843472
End: 1844017
Strand: Direct
Name: 91787664
Synonym: Bpro_1782
Alternate gene names: NA
Gene position: 1843472-1844017 (Clockwise)
Preceding gene: 91787663
Following gene: 91787678
Centisome position: 35.45
GC content: 58.42
Gene sequence:
>546_bases ATGACGATGGTGTTTTCTGATCATTACCGTTTTTTGGCCCACTACAACCGCTGGATGAACCAGCGCCTGTATGACGCTTG CGAGGCGCTGACCGATGATGAGCGAAAGCTTGAGCGCGGTGCTTTTTTTGGCTCAATTCACGGGACGCTGAACCACCTGA TCGTTGGCGACCAGATCTGGCTACGCCGACTTGCCCAGTGTGGCCTGGACAACGACATCAGGTTGGCCAGCCTGAATGCC AAGGTGCTGGATCTGCCCGCCGGCAGTCGGCTGAACACCGTGGTGTTCGACGACTGGAAGGAGCTGCGTGCCAAGCGCAA GCAGCTCGATGCCGCCATCGAGAACTGGGTGGTGGAGATGCCCGATGTTTTCCTGCAGCTCACCATGCGCTATGGCAACA GCAGTGGCGTTGAGCGCACGCATCCGGTCTGGCAGGCGATGACACACTTTTTTAACCATCAGACGCATCACCGTGGGCAG GTCAGCACGCTGCTCATACAGGCCGGTGTCGATGTTGGCGTGACCGACCTGATTGCGCTCGCCTAG
Upstream 100 bases:
>100_bases GCCTTAAACACATTTCCCCTGGTTCTTGTGTTTTAAGTAAAAAGCGCACAAAGTCATTGTCAAATAAGCACATGCAGCTA TCCACGCAGGAGCAAATGGC
Downstream 100 bases:
>100_bases GCATCATTGTCGCCAAACACTGACAAGGGGCGGAGAGAGTAAAAAGGCATTAAAAAACCCGCCAGGGGGCGGGTTTTTTG GGTCGGTGGACTTTGAAGGT
Product: DinB
Products: NA
Alternate protein names: DinB Family; Dinb Family Protein; Damage Inducible Protein
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MTMVFSDHYRFLAHYNRWMNQRLYDACEALTDDERKLERGAFFGSIHGTLNHLIVGDQIWLRRLAQCGLDNDIRLASLNA KVLDLPAGSRLNTVVFDDWKELRAKRKQLDAAIENWVVEMPDVFLQLTMRYGNSSGVERTHPVWQAMTHFFNHQTHHRGQ VSTLLIQAGVDVGVTDLIALA
Sequences:
>Translated_181_residues MTMVFSDHYRFLAHYNRWMNQRLYDACEALTDDERKLERGAFFGSIHGTLNHLIVGDQIWLRRLAQCGLDNDIRLASLNA KVLDLPAGSRLNTVVFDDWKELRAKRKQLDAAIENWVVEMPDVFLQLTMRYGNSSGVERTHPVWQAMTHFFNHQTHHRGQ VSTLLIQAGVDVGVTDLIALA >Mature_180_residues TMVFSDHYRFLAHYNRWMNQRLYDACEALTDDERKLERGAFFGSIHGTLNHLIVGDQIWLRRLAQCGLDNDIRLASLNAK VLDLPAGSRLNTVVFDDWKELRAKRKQLDAAIENWVVEMPDVFLQLTMRYGNSSGVERTHPVWQAMTHFFNHQTHHRGQV STLLIQAGVDVGVTDLIALA
Specific function: Unknown
COG id: COG2318
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20805; Mature: 20674
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMVFSDHYRFLAHYNRWMNQRLYDACEALTDDERKLERGAFFGSIHGTLNHLIVGDQIW CCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCHHH LRRLAQCGLDNDIRLASLNAKVLDLPAGSRLNTVVFDDWKELRAKRKQLDAAIENWVVEM HHHHHHCCCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH PDVFLQLTMRYGNSSGVERTHPVWQAMTHFFNHQTHHRGQVSTLLIQAGVDVGVTDLIAL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHC A C >Mature Secondary Structure TMVFSDHYRFLAHYNRWMNQRLYDACEALTDDERKLERGAFFGSIHGTLNHLIVGDQIW CEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCHHH LRRLAQCGLDNDIRLASLNAKVLDLPAGSRLNTVVFDDWKELRAKRKQLDAAIENWVVEM HHHHHHCCCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH PDVFLQLTMRYGNSSGVERTHPVWQAMTHFFNHQTHHRGQVSTLLIQAGVDVGVTDLIAL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA