Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787648

Identifier: 91787648

GI number: 91787648

Start: 1825677

End: 1826693

Strand: Direct

Name: 91787648

Synonym: Bpro_1766

Alternate gene names: NA

Gene position: 1825677-1826693 (Clockwise)

Preceding gene: 91787646

Following gene: 91787649

Centisome position: 35.11

GC content: 68.34

Gene sequence:

>1017_bases
ATGCAAGTTGACCCACGTTCCAACCCAAATTCGCGACGCGAGTTTCTTCGCGCAGGCTCGGCCACAGTCGCCGCCTTGCT
GATCCTGGGCGCCGGCGAAAGCGCCCGTGCGCAGCCAGCGATCGAGACGTTGCATATTCTCAGCGGCTCTGCCGCAGGGA
GCACACCCGACATTGTGGCGCGCCACGTCGCCGAGCAGTTGAGCGGCCGCTACGCCAAAACCGCCATCGTCGACAACCGT
CCCGGCGCCGCAGGGCGGATCGCCATGAACGCCTTGAAGCTGGCCCCCACGGACGGGTCGACCGTCTGCCTGGCAGCCGG
TTCGATCGCCACGGTCAATCCCCACATTTACGCCAATCTGGGGTACGACCCGGCGGTCGATCTGCAGCCGGTTTCGCTGG
CGGCCGAGATGCCCTTGGCGTTGGCCGTCGGCCCCGCGGTGCCCGACAGCGTGGTCAACGTGCGCGACTTCATCGAATGG
ATGCGGCGCAACCCGACGCTTGCCAACGTCGGATCGCCGGGCGTGGGAAGCTTGCCGCACCTTCTCGAGGCCGTTCTCTT
TCGTCAGGCCGATGTGGCTTGGCGGCATGTCGGCTATTCGGGCGGTGCGCCCACCGTGGTCGCCCTGCTGGGGGGACAGA
TTGCGGCGCTGGTCCTGCCCGAGGCGGTCTTGGGCCAGCACCGGGCGGCCGGAAAGTTGCGTGTCCTGGCCACGTCGGGG
GCGCAGCGCAGCCGCTACATGCCCGACGTACCCAACCTCGTCGAGCAGGGGTATCGCGAGCTGGTGGTGAGCGAGTGGTT
CGCGTTCTTCATGGCCGCCCGAGTGCCGGCGGCCATGATCGACGCCACCTCGCAAGCGATCCGCCTGGCCATAGCGCGGC
CGGAACTGGCGGGCGCCTTCGCGGAGTTGGGCATGGTCGCGGCGTCGAGCACACCGGCAGAGCTGGCGGCTCGCATCGCG
GCGGAACGACGCTATTGGGAGCCGATCATCCGCGCCACCGGCATTCGGGCCGAGTGA

Upstream 100 bases:

>100_bases
GCACGGTCGGCATCGACATGCCGCATCATGCATCTTCCCCCAACTCGGCCGATGTGCGCAAATCGGGCTCATCGAATGCA
TCACCAACCGGGGAGATCAC

Downstream 100 bases:

>100_bases
TCTGGAGCGACCGTGGCACATGACGCTACCGATCCGGCGACCACGCTCCACCGCCTGGTGACCGGCTATCAGGTGTCGCA
AGCGATTCACGTCGCGGCAA

Product: twin-arginine translocation pathway signal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MQVDPRSNPNSRREFLRAGSATVAALLILGAGESARAQPAIETLHILSGSAAGSTPDIVARHVAEQLSGRYAKTAIVDNR
PGAAGRIAMNALKLAPTDGSTVCLAAGSIATVNPHIYANLGYDPAVDLQPVSLAAEMPLALAVGPAVPDSVVNVRDFIEW
MRRNPTLANVGSPGVGSLPHLLEAVLFRQADVAWRHVGYSGGAPTVVALLGGQIAALVLPEAVLGQHRAAGKLRVLATSG
AQRSRYMPDVPNLVEQGYRELVVSEWFAFFMAARVPAAMIDATSQAIRLAIARPELAGAFAELGMVAASSTPAELAARIA
AERRYWEPIIRATGIRAE

Sequences:

>Translated_338_residues
MQVDPRSNPNSRREFLRAGSATVAALLILGAGESARAQPAIETLHILSGSAAGSTPDIVARHVAEQLSGRYAKTAIVDNR
PGAAGRIAMNALKLAPTDGSTVCLAAGSIATVNPHIYANLGYDPAVDLQPVSLAAEMPLALAVGPAVPDSVVNVRDFIEW
MRRNPTLANVGSPGVGSLPHLLEAVLFRQADVAWRHVGYSGGAPTVVALLGGQIAALVLPEAVLGQHRAAGKLRVLATSG
AQRSRYMPDVPNLVEQGYRELVVSEWFAFFMAARVPAAMIDATSQAIRLAIARPELAGAFAELGMVAASSTPAELAARIA
AERRYWEPIIRATGIRAE
>Mature_338_residues
MQVDPRSNPNSRREFLRAGSATVAALLILGAGESARAQPAIETLHILSGSAAGSTPDIVARHVAEQLSGRYAKTAIVDNR
PGAAGRIAMNALKLAPTDGSTVCLAAGSIATVNPHIYANLGYDPAVDLQPVSLAAEMPLALAVGPAVPDSVVNVRDFIEW
MRRNPTLANVGSPGVGSLPHLLEAVLFRQADVAWRHVGYSGGAPTVVALLGGQIAALVLPEAVLGQHRAAGKLRVLATSG
AQRSRYMPDVPNLVEQGYRELVVSEWFAFFMAARVPAAMIDATSQAIRLAIARPELAGAFAELGMVAASSTPAELAARIA
AERRYWEPIIRATGIRAE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 35423; Mature: 35423

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVDPRSNPNSRREFLRAGSATVAALLILGAGESARAQPAIETLHILSGSAAGSTPDIVA
CCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHH
RHVAEQLSGRYAKTAIVDNRPGAAGRIAMNALKLAPTDGSTVCLAAGSIATVNPHIYANL
HHHHHHHCCCHHHEEEECCCCCCCHHHHHHHEEECCCCCCEEEEECCCEEEECCEEEEEC
GYDPAVDLQPVSLAAEMPLALAVGPAVPDSVVNVRDFIEWMRRNPTLANVGSPGVGSLPH
CCCCCCCCCHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHH
LLEAVLFRQADVAWRHVGYSGGAPTVVALLGGQIAALVLPEAVLGQHRAAGKLRVLATSG
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEECC
AQRSRYMPDVPNLVEQGYRELVVSEWFAFFMAARVPAAMIDATSQAIRLAIARPELAGAF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCHHHHHH
AELGMVAASSTPAELAARIAAERRYWEPIIRATGIRAE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQVDPRSNPNSRREFLRAGSATVAALLILGAGESARAQPAIETLHILSGSAAGSTPDIVA
CCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHH
RHVAEQLSGRYAKTAIVDNRPGAAGRIAMNALKLAPTDGSTVCLAAGSIATVNPHIYANL
HHHHHHHCCCHHHEEEECCCCCCCHHHHHHHEEECCCCCCEEEEECCCEEEECCEEEEEC
GYDPAVDLQPVSLAAEMPLALAVGPAVPDSVVNVRDFIEWMRRNPTLANVGSPGVGSLPH
CCCCCCCCCHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHH
LLEAVLFRQADVAWRHVGYSGGAPTVVALLGGQIAALVLPEAVLGQHRAAGKLRVLATSG
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEECC
AQRSRYMPDVPNLVEQGYRELVVSEWFAFFMAARVPAAMIDATSQAIRLAIARPELAGAF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCHHHHHH
AELGMVAASSTPAELAARIAAERRYWEPIIRATGIRAE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12910271; 9524276 [H]