| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is sseA [H]
Identifier: 91787624
GI number: 91787624
Start: 1801844
End: 1802746
Strand: Reverse
Name: sseA [H]
Synonym: Bpro_1742
Alternate gene names: 91787624
Gene position: 1802746-1801844 (Counterclockwise)
Preceding gene: 91787625
Following gene: 91787623
Centisome position: 34.67
GC content: 67.44
Gene sequence:
>903_bases ATGGACTACACCACCCTGATTTCCGTGGAGCAGCTACAGGGGCTGATGGCCCGGAGCCAACGCCTGCGCGTGTTTGACTG CAGCTTTGACCTGATGCAGCCGCACGCTGGAGAACAGCAATACCTGGAGGCGCACATTCCCGGCGCCGTGTACGCCGACC TGGACAGGGCCCTGACCGCCAGGCACGGGGTGCCGGGCGCCCATGGCGTGATCACGGCCACCGGCGCCGACGCCCCCGCT TCAGGCGGGCGCCATCCGCTGCCCAATCGCGAAAAATTTGCCACCTGGCTGTCCAGCGTCGGCTTGGCCAATGACATGCA GGCCGTCGTCTACGACCGCAACGGCGCCAACTACTGCGGCCGCCTGTGGTGGATGCTCAAATGGGCCGGCCACGACAAGG TGGCGGTACTCAACGGCGGGCTGCAGGCCTGGCAGGCAGCAGGGGGCGCCGTCAACAGCGGCGAAGAACCTGCGCACTTT GCGGCCAGTTTTCTGCTCTCCCCTGCCCGCGCCACGCTCGTCGATGCGCAAACGGTGGCCGAACAGCTCGGACGCTCCGG CCAGACCCTGATAGATGCCCGTGCCGCACCCCGTTTCAGGGGTGAGGTGGAGCCACTGGACCCGGTGGCCGGCCACATTC CCGGCGCGCTGAACCGGCCTTTCAGCCAGAACCTCGGCGCCGACGGAAAATTCAAACCGGCAGCGCAACTGAAGGCCGAA TTTGAAGCCCTGCTGGGCCAGCGCGACCCGGCCACCGTCGTGCACCACTGCGGCAGCGGTGTCAGCGCGGTGCCCAACCT GATCGCGATGGAAATTGCGGGCTTGGGTCGCACCGGCCTGTATGCCGGCAGCTGGAGCGACTGGTGCAGCGACCCGGACC GGCCAGTGGCACAGGGAGCCTGA
Upstream 100 bases:
>100_bases TCATTATTGTCAGCGCGATTGTTGCCACCGTGCTGCGGGCGAATGCGGCGCCCAACGCCCCCGCTGAAGAGCATTGACCT GCAAGTGAAGGAGCATTGAG
Downstream 100 bases:
>100_bases GGGGGCCTGGAAGCGCCGGATGAGTATTTGAAATGTTCAGCCAACCGCGATCGCGGTGCTTTAGCATCGGGTTGAACCGA ACATCGCATGCCAAACACCT
Product: 3-mercaptopyruvate sulfurtransferase
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MDYTTLISVEQLQGLMARSQRLRVFDCSFDLMQPHAGEQQYLEAHIPGAVYADLDRALTARHGVPGAHGVITATGADAPA SGGRHPLPNREKFATWLSSVGLANDMQAVVYDRNGANYCGRLWWMLKWAGHDKVAVLNGGLQAWQAAGGAVNSGEEPAHF AASFLLSPARATLVDAQTVAEQLGRSGQTLIDARAAPRFRGEVEPLDPVAGHIPGALNRPFSQNLGADGKFKPAAQLKAE FEALLGQRDPATVVHHCGSGVSAVPNLIAMEIAGLGRTGLYAGSWSDWCSDPDRPVAQGA
Sequences:
>Translated_300_residues MDYTTLISVEQLQGLMARSQRLRVFDCSFDLMQPHAGEQQYLEAHIPGAVYADLDRALTARHGVPGAHGVITATGADAPA SGGRHPLPNREKFATWLSSVGLANDMQAVVYDRNGANYCGRLWWMLKWAGHDKVAVLNGGLQAWQAAGGAVNSGEEPAHF AASFLLSPARATLVDAQTVAEQLGRSGQTLIDARAAPRFRGEVEPLDPVAGHIPGALNRPFSQNLGADGKFKPAAQLKAE FEALLGQRDPATVVHHCGSGVSAVPNLIAMEIAGLGRTGLYAGSWSDWCSDPDRPVAQGA >Mature_300_residues MDYTTLISVEQLQGLMARSQRLRVFDCSFDLMQPHAGEQQYLEAHIPGAVYADLDRALTARHGVPGAHGVITATGADAPA SGGRHPLPNREKFATWLSSVGLANDMQAVVYDRNGANYCGRLWWMLKWAGHDKVAVLNGGLQAWQAAGGAVNSGEEPAHF AASFLLSPARATLVDAQTVAEQLGRSGQTLIDARAAPRFRGEVEPLDPVAGHIPGALNRPFSQNLGADGKFKPAAQLKAE FEALLGQRDPATVVHHCGSGVSAVPNLIAMEIAGLGRTGLYAGSWSDWCSDPDRPVAQGA
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI17402865, Length=291, Percent_Identity=32.9896907216495, Blast_Score=122, Evalue=3e-28, Organism=Homo sapiens, GI61835204, Length=280, Percent_Identity=31.4285714285714, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI194473681, Length=280, Percent_Identity=31.4285714285714, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI194473668, Length=280, Percent_Identity=31.4285714285714, Blast_Score=108, Evalue=6e-24, Organism=Escherichia coli, GI87082121, Length=263, Percent_Identity=33.8403041825095, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI87081967, Length=277, Percent_Identity=24.9097472924188, Blast_Score=69, Evalue=5e-13, Organism=Caenorhabditis elegans, GI71997283, Length=274, Percent_Identity=28.1021897810219, Blast_Score=97, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17561888, Length=313, Percent_Identity=24.6006389776358, Blast_Score=86, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6324825, Length=267, Percent_Identity=28.4644194756554, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 31822; Mature: 31822
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYTTLISVEQLQGLMARSQRLRVFDCSFDLMQPHAGEQQYLEAHIPGAVYADLDRALTA CCCHHEEEHHHHHHHHHHHCCCEEEECCCHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHH RHGVPGAHGVITATGADAPASGGRHPLPNREKFATWLSSVGLANDMQAVVYDRNGANYCG HCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHH RLWWMLKWAGHDKVAVLNGGLQAWQAAGGAVNSGEEPAHFAASFLLSPARATLVDAQTVA HHHHHEEECCCCEEEEEECCHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH EQLGRSGQTLIDARAAPRFRGEVEPLDPVAGHIPGALNRPFSQNLGADGKFKPAAQLKAE HHHCCCCCEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHH FEALLGQRDPATVVHHCGSGVSAVPNLIAMEIAGLGRTGLYAGSWSDWCSDPDRPVAQGA HHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCC >Mature Secondary Structure MDYTTLISVEQLQGLMARSQRLRVFDCSFDLMQPHAGEQQYLEAHIPGAVYADLDRALTA CCCHHEEEHHHHHHHHHHHCCCEEEECCCHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHH RHGVPGAHGVITATGADAPASGGRHPLPNREKFATWLSSVGLANDMQAVVYDRNGANYCG HCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHH RLWWMLKWAGHDKVAVLNGGLQAWQAAGGAVNSGEEPAHFAASFLLSPARATLVDAQTVA HHHHHEEECCCCEEEEEECCHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH EQLGRSGQTLIDARAAPRFRGEVEPLDPVAGHIPGALNRPFSQNLGADGKFKPAAQLKAE HHHCCCCCEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHH FEALLGQRDPATVVHHCGSGVSAVPNLIAMEIAGLGRTGLYAGSWSDWCSDPDRPVAQGA HHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]