| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787625
Identifier: 91787625
GI number: 91787625
Start: 1802770
End: 1803681
Strand: Reverse
Name: 91787625
Synonym: Bpro_1743
Alternate gene names: NA
Gene position: 1803681-1802770 (Counterclockwise)
Preceding gene: 91787626
Following gene: 91787624
Centisome position: 34.68
GC content: 62.17
Gene sequence:
>912_bases ATGCAAGCCGTCTGGATGATCGCCTCCTCGTTCCTGTTTGCCACGATGGGGGTTTGCGTCAAGTACGCCTCCCAACACTT CAACAGCGCCGAGCTGGTGTTTTACCGCGGCGTGCTGGGCATTTTCTTCATGGCCGCCTATGCCCGCGCTACCGGCACCT CCCTGCGCACCAGCGTGCCCGCCATGCATGCGTGGCGAAGCGTCGTCGGCGTGGTGGCACTGTCGGCCTGGTTTTATGCG ATTGCACACCTGCCGCTGGCCACCGCGATGACGCTCAACTACATGAGCAGCGTCTGGATTGCCGCATTTTTGGTGGGCGG CTCGCTCATGCTCGGTCGCCCCAACAAGCGGGGAACCAGCCAGGGCCCGCTGGTACTGGCGATTCTGGCCAGCTTCGCCG GCGTGGTCATGCTGCTGCGCCCCGCCATGGACCAGAACCAGACCTTTGCCGGCATTATTGGGCTGCTGTCCGGGCTGGGC GCTGCATTTGCCTACATGCAGGTCATGGCAATTTCGCGCATGGGTGAACCCGAAACGCGGACAGTGTTCTACTTTGCCGT AGGTACCGCCGTGGCCGGCGCCCTGGGCATGCTGGTCATGGGAATTTCGCCCTGGCACTGGCAACATGCGCTCTGGCTGC CGCCGCTGGGGATTCTGGCTTCTCTCGGCCAACTGGCCATGACCAAGGCGTATTCGATGTCTTCCACCTCCGATGGCCAT GGCGGAACCCTGATGGTCGCCAACCTGCAGTACTCTGGCATTGTGTTTGCGGCGCTCTACAGCCTGATCCTGTTTGGTGA CAATATTCCCCTGATGGGTTGGGCCGGCATGGCGCTCATTATTGTCAGCGCGATTGTTGCCACCGTGCTGCGGGCGAATG CGGCGCCCAACGCCCCCGCTGAAGAGCATTGA
Upstream 100 bases:
>100_bases GGGCATGCCCCTCGCTATGCATTTGATGGCTGCCAACCCGGACCCGTACCGGGTTACGGCCTTTTTTTACGCCTGAAAAA TCTGCGGACGACCACACACG
Downstream 100 bases:
>100_bases CCTGCAAGTGAAGGAGCATTGAGATGGACTACACCACCCTGATTTCCGTGGAGCAGCTACAGGGGCTGATGGCCCGGAGC CAACGCCTGCGCGTGTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MQAVWMIASSFLFATMGVCVKYASQHFNSAELVFYRGVLGIFFMAAYARATGTSLRTSVPAMHAWRSVVGVVALSAWFYA IAHLPLATAMTLNYMSSVWIAAFLVGGSLMLGRPNKRGTSQGPLVLAILASFAGVVMLLRPAMDQNQTFAGIIGLLSGLG AAFAYMQVMAISRMGEPETRTVFYFAVGTAVAGALGMLVMGISPWHWQHALWLPPLGILASLGQLAMTKAYSMSSTSDGH GGTLMVANLQYSGIVFAALYSLILFGDNIPLMGWAGMALIIVSAIVATVLRANAAPNAPAEEH
Sequences:
>Translated_303_residues MQAVWMIASSFLFATMGVCVKYASQHFNSAELVFYRGVLGIFFMAAYARATGTSLRTSVPAMHAWRSVVGVVALSAWFYA IAHLPLATAMTLNYMSSVWIAAFLVGGSLMLGRPNKRGTSQGPLVLAILASFAGVVMLLRPAMDQNQTFAGIIGLLSGLG AAFAYMQVMAISRMGEPETRTVFYFAVGTAVAGALGMLVMGISPWHWQHALWLPPLGILASLGQLAMTKAYSMSSTSDGH GGTLMVANLQYSGIVFAALYSLILFGDNIPLMGWAGMALIIVSAIVATVLRANAAPNAPAEEH >Mature_303_residues MQAVWMIASSFLFATMGVCVKYASQHFNSAELVFYRGVLGIFFMAAYARATGTSLRTSVPAMHAWRSVVGVVALSAWFYA IAHLPLATAMTLNYMSSVWIAAFLVGGSLMLGRPNKRGTSQGPLVLAILASFAGVVMLLRPAMDQNQTFAGIIGLLSGLG AAFAYMQVMAISRMGEPETRTVFYFAVGTAVAGALGMLVMGISPWHWQHALWLPPLGILASLGQLAMTKAYSMSSTSDGH GGTLMVANLQYSGIVFAALYSLILFGDNIPLMGWAGMALIIVSAIVATVLRANAAPNAPAEEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32125; Mature: 32125
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAVWMIASSFLFATMGVCVKYASQHFNSAELVFYRGVLGIFFMAAYARATGTSLRTSVP CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCH AMHAWRSVVGVVALSAWFYAIAHLPLATAMTLNYMSSVWIAAFLVGGSLMLGRPNKRGTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC QGPLVLAILASFAGVVMLLRPAMDQNQTFAGIIGLLSGLGAAFAYMQVMAISRMGEPETR CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH TVFYFAVGTAVAGALGMLVMGISPWHWQHALWLPPLGILASLGQLAMTKAYSMSSTSDGH EEEEEHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCC GGTLMVANLQYSGIVFAALYSLILFGDNIPLMGWAGMALIIVSAIVATVLRANAAPNAPA CCEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EEH CCC >Mature Secondary Structure MQAVWMIASSFLFATMGVCVKYASQHFNSAELVFYRGVLGIFFMAAYARATGTSLRTSVP CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCH AMHAWRSVVGVVALSAWFYAIAHLPLATAMTLNYMSSVWIAAFLVGGSLMLGRPNKRGTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC QGPLVLAILASFAGVVMLLRPAMDQNQTFAGIIGLLSGLGAAFAYMQVMAISRMGEPETR CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH TVFYFAVGTAVAGALGMLVMGISPWHWQHALWLPPLGILASLGQLAMTKAYSMSSTSDGH EEEEEHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCC GGTLMVANLQYSGIVFAALYSLILFGDNIPLMGWAGMALIIVSAIVATVLRANAAPNAPA CCEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EEH CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]