| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is kdgK [H]
Identifier: 91787619
GI number: 91787619
Start: 1794630
End: 1795574
Strand: Reverse
Name: kdgK [H]
Synonym: Bpro_1737
Alternate gene names: 91787619
Gene position: 1795574-1794630 (Counterclockwise)
Preceding gene: 91787620
Following gene: 91787618
Centisome position: 34.53
GC content: 69.1
Gene sequence:
>945_bases ATGACCAGTGCGCTGGACGTTATTACTTTTGGCGAAGCCATGATGCTGCTGGTTGCCGACCGGCCAGGCCCGCTCGAGCA TGCCGAGGCCTTTCACAAGCGCACCGCCGGCGCGGAGACCAATGTGGCCATCGGCCTGGCGCGCCTGGGCCTGAAGGTCG GCTGGGCCAGCCGCCTGGGCACAGACTCCATGGGCCGTTACTTGCTGGCCGCCATGGCCGCCGAAGGCATCGACTGCTCG CACGTGGTCTGCGATGCGACGCAAAAAACCGGCTTCCAGTTCAAGGGCAAGGTCACTGACGGCAGCGACCCGCCGGTGGA ATACCACCGCAAGGGCTCGGCCGCCAGCCACATGGGCGTTGCCGACATTGACGAAGCCTGGCTGCTGTCGGCCCGGCACC TGCACGCCACCGGCGTGTTTCCGGCCATCTCGGCCACCACCCTGCCCGCCGCCCGCAAGACCATGGACCTGATGCGCGCC GCCGGCCGCAGCGTGTCGTTCGACCCCAACCTGCGCCCCACGCTGTGGGCCACGCCCGAACTGATGCGCGACGCCATCAA CGACCTGGCCACGCGCGCCGACTGGGTGCTGCCCGGCATGGAAGAAGGCCGCTTCCTGACCGGCGAAACCACGCCCGAAG GCGTCGCCCGCTTTTACCGCCAGCTCGGTGCGAAGCTGGTCGTGGTCAAGCTCGGTGCAGAAGGGGCTTACTTTGACGGC GAAGCCGGCAGCGGCCGTGTGGCGGGTTTTCCGGTGGCCGAAGTGGTGGACACCGTGGGCGCGGGTGACGGCTTCGCGGT GGGCGTGATCAGCGCGCTGCTCGACGGCCTGGGCGTGCCCGAGGCCGTGAAGCGCGGCGCCTGGATCGGCGCGCGCGCGG TGCAGGTGCTGGGCGACAGCGAAGGCCTGCCGACGCGCGCCGAACTCAACGCCGCAAAGCTTTAA
Upstream 100 bases:
>100_bases TTCACTGAAACCGATTTCACAATCAAGCCCATCTGGCCGCGGCTTTAAGCCTTCAAAGCCGCGGCCCCACGCTTTCATCC AACAGCAGGAGAGCCCCCTC
Downstream 100 bases:
>100_bases ATCATGGGCGCGCCAGCTTCACCACCCGTTCGCAAGAAGATCCTGGTCTTCCGCGAGCTGCCGCCCGACCAGCTGGCGCG CCTGCAGGCAATGCACGAGG
Product: PfkB
Products: NA
Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MTSALDVITFGEAMMLLVADRPGPLEHAEAFHKRTAGAETNVAIGLARLGLKVGWASRLGTDSMGRYLLAAMAAEGIDCS HVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDEAWLLSARHLHATGVFPAISATTLPAARKTMDLMRA AGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTGETTPEGVARFYRQLGAKLVVVKLGAEGAYFDG EAGSGRVAGFPVAEVVDTVGAGDGFAVGVISALLDGLGVPEAVKRGAWIGARAVQVLGDSEGLPTRAELNAAKL
Sequences:
>Translated_314_residues MTSALDVITFGEAMMLLVADRPGPLEHAEAFHKRTAGAETNVAIGLARLGLKVGWASRLGTDSMGRYLLAAMAAEGIDCS HVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDEAWLLSARHLHATGVFPAISATTLPAARKTMDLMRA AGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTGETTPEGVARFYRQLGAKLVVVKLGAEGAYFDG EAGSGRVAGFPVAEVVDTVGAGDGFAVGVISALLDGLGVPEAVKRGAWIGARAVQVLGDSEGLPTRAELNAAKL >Mature_313_residues TSALDVITFGEAMMLLVADRPGPLEHAEAFHKRTAGAETNVAIGLARLGLKVGWASRLGTDSMGRYLLAAMAAEGIDCSH VVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDEAWLLSARHLHATGVFPAISATTLPAARKTMDLMRAA GRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTGETTPEGVARFYRQLGAKLVVVKLGAEGAYFDGE AGSGRVAGFPVAEVVDTVGAGDGFAVGVISALLDGLGVPEAVKRGAWIGARAVQVLGDSEGLPTRAELNAAKL
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI87081971, Length=284, Percent_Identity=27.4647887323944, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI87082281, Length=287, Percent_Identity=29.616724738676, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.45 [H]
Molecular weight: Translated: 32926; Mature: 32795
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSALDVITFGEAMMLLVADRPGPLEHAEAFHKRTAGAETNVAIGLARLGLKVGWASRLG CCCHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC TDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGV CHHHHHHHHHHHHHCCCCCCHHEECCHHHCCCEEEEEECCCCCCCHHHHCCCCCHHCCCC ADIDEAWLLSARHLHATGVFPAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPE CCCCHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCHH LMRDAINDLATRADWVLPGMEEGRFLTGETTPEGVARFYRQLGAKLVVVKLGAEGAYFDG HHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCEEEEEEECCCCCEECC EAGSGRVAGFPVAEVVDTVGAGDGFAVGVISALLDGLGVPEAVKRGAWIGARAVQVLGDS CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHEECCC EGLPTRAELNAAKL CCCCCHHCCCCCCC >Mature Secondary Structure TSALDVITFGEAMMLLVADRPGPLEHAEAFHKRTAGAETNVAIGLARLGLKVGWASRLG CCHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC TDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGV CHHHHHHHHHHHHHCCCCCCHHEECCHHHCCCEEEEEECCCCCCCHHHHCCCCCHHCCCC ADIDEAWLLSARHLHATGVFPAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPE CCCCHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCHH LMRDAINDLATRADWVLPGMEEGRFLTGETTPEGVARFYRQLGAKLVVVKLGAEGAYFDG HHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCEEEEEEECCCCCEECC EAGSGRVAGFPVAEVVDTVGAGDGFAVGVISALLDGLGVPEAVKRGAWIGARAVQVLGDS CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHEECCC EGLPTRAELNAAKL CCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]