Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787603

Identifier: 91787603

GI number: 91787603

Start: 1774427

End: 1775833

Strand: Direct

Name: 91787603

Synonym: Bpro_1721

Alternate gene names: NA

Gene position: 1774427-1775833 (Clockwise)

Preceding gene: 91787598

Following gene: 91787604

Centisome position: 34.12

GC content: 68.8

Gene sequence:

>1407_bases
ATGACGCGCGACCAATTACTCGAATCTGCCTCCGCCTGGTTTGACGCCGGGCATTTCCAGCGTGACCTGGCCCGCCGCGT
GGCCTGGCGCACCGAGAGCGACGGCGGGCAGCCCGGCCCAGCCCTGGGCGACTACTTGCGCGATGACATCGTGCCATCCC
TGATCCGGCTGGGCTTTGACTGCGAGGTGCAGGCCAACCCGGTGGCTACCGGTGGGCCGCTGCTGGTGGCGCGCCGCGTC
GAGGGCCAGGACCTGCCTACCGTGCTGACCTACGGGCATGGCGACGTGGTCAACGGCCAGGACAAGCACTGGCGTGAAGG
CCTGAGCCCGTGGCAATTGACCGTGGAGGGCGACCGCTGGTACGGCCGCGGCACGGCAGACAACAAGGGCCAGCACACCA
TCAACTTCGCGGCGCTGGAGCACACCCTGGGCGCGCGTGGCGGCCGGCTGGGCTACAACGTGACGGTGCTGCTGGAAATG
GGCGAGGAGGCGGGCAGTCCGGGCCTGCGTGAGCTGTGCGAGCGCGAACGCGAGCTGCTGCGCGCCGATTTGCTGATCGC
CTGCGACGGGCCGCGCGTGCAGGCGCAGCAGCCCACCCTGTTCCTGGGCTCACGCGGGCTGGTCAATTTCTCGCTGCGCC
TGCAAAGCCGCGAGCGCGCCTACCACTCGGGCAACTGGGGTGGCGTGTTGACCAACCCCGGCATCGTGCTGGCGCATGCC
ATCGCATCCATGGTCGATGAACGGGGGCGTATCCAGGTCGATGGTTTGCGCCCACCGGCACTGGCGGACAACATCCGGCG
CGCGCTGCGCGACGTGCAGGTCGGCGGCGGCACAGACGATCCGCAGATCAATCCCGCCTGGGGTGAGCCCGGCCTGACGG
CGGCTGAACGCCTGGTTGGCTGGAACACGCTGGAAGTGCTGGCGCTGGGAGCTGGCTCGGCCGAGCGTCCGGTCAATGCG
ATTCCACCTCAGGCGGTGGCGCACTGCCAGCTGCGCTTTGTGCCGGGTACGCCGTGGCAGCAGTTGCAGAGCATCGTGCG
CGCCCATCTGGACGCGCACGGCTTTGACGCCGTGGAAGTGAGCGTTACCGCCGACTCGCCCGCCACGCGCCTGGATCTGG
ACAACCCCTGGGTCGGCTGGGCCATGCAGTCCATGGCGATGAGCAGCGGCAAGCCCGTCACCCTGTTGCCCAATCTGGCC
GGCTCGTTGCCCAACGACGTGTTTGCCGATGTGCTGGGCCTGCCCACGCTATGGGTGCCGCATTCCTATCCGGCCTGTGC
CCAGCACGCGCCCAACGAACACCTGCTGGCGTCCGTCGCCAGCGAAGGCCTGCGCATCATGGCTGGACTGTACTGGGATC
TGGGCGAGCCGGGCCTGCCCTGGCAGCGCAGTGCGCGTGCTCAATGA

Upstream 100 bases:

>100_bases
CGTGCATTGCCGCCAACGCAAGGCTGAGTTGCTTATTCTCAAATTGTGAAAGCTTTTTGAGTTTATTAGACTTTTGGCAA
TGCTCCAAGGATGCCAAAAC

Downstream 100 bases:

>100_bases
GCCTCACGGAGCCCCTCGCTTGAGTTTTTTAACCTGAAAAGAGAACAGCATGACATCGACATCGACATCGACATCGACAT
CGACATCGACATCACGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidase; M20/M25/M40 Family Peptidase; Peptidase Family; Succinyl-Diaminopimelate Desuccinylase; Beta-Ala-His Dipeptidase; Peptidase Dimerisation Domain Protein; Peptidase Dimerisation Domain-Containing Protein; ArgE/DapE/Acy1 Family Protein; Deacylase; Peptidase Dimerization Domain Protein; N-Acyl-L-Amino Acid Amidohydrolase; Succinyl-Diaminopimelate Desuccinylase Protein; Peptidase Or Deacetlylase Family Protein; Desuccinylase Deacetylase Or Peptidase; Zinc Metallopeptidase; Acetylornithine Deacetylase ArgE; N-Succinyl-Diaminopimelate Deacylase; ArgE/DapE/Acy1 Family Peptidase; Nonspecific Dipeptidase; Acetylornithine Deacetylase

Number of amino acids: Translated: 468; Mature: 467

Protein sequence:

>468_residues
MTRDQLLESASAWFDAGHFQRDLARRVAWRTESDGGQPGPALGDYLRDDIVPSLIRLGFDCEVQANPVATGGPLLVARRV
EGQDLPTVLTYGHGDVVNGQDKHWREGLSPWQLTVEGDRWYGRGTADNKGQHTINFAALEHTLGARGGRLGYNVTVLLEM
GEEAGSPGLRELCERERELLRADLLIACDGPRVQAQQPTLFLGSRGLVNFSLRLQSRERAYHSGNWGGVLTNPGIVLAHA
IASMVDERGRIQVDGLRPPALADNIRRALRDVQVGGGTDDPQINPAWGEPGLTAAERLVGWNTLEVLALGAGSAERPVNA
IPPQAVAHCQLRFVPGTPWQQLQSIVRAHLDAHGFDAVEVSVTADSPATRLDLDNPWVGWAMQSMAMSSGKPVTLLPNLA
GSLPNDVFADVLGLPTLWVPHSYPACAQHAPNEHLLASVASEGLRIMAGLYWDLGEPGLPWQRSARAQ

Sequences:

>Translated_468_residues
MTRDQLLESASAWFDAGHFQRDLARRVAWRTESDGGQPGPALGDYLRDDIVPSLIRLGFDCEVQANPVATGGPLLVARRV
EGQDLPTVLTYGHGDVVNGQDKHWREGLSPWQLTVEGDRWYGRGTADNKGQHTINFAALEHTLGARGGRLGYNVTVLLEM
GEEAGSPGLRELCERERELLRADLLIACDGPRVQAQQPTLFLGSRGLVNFSLRLQSRERAYHSGNWGGVLTNPGIVLAHA
IASMVDERGRIQVDGLRPPALADNIRRALRDVQVGGGTDDPQINPAWGEPGLTAAERLVGWNTLEVLALGAGSAERPVNA
IPPQAVAHCQLRFVPGTPWQQLQSIVRAHLDAHGFDAVEVSVTADSPATRLDLDNPWVGWAMQSMAMSSGKPVTLLPNLA
GSLPNDVFADVLGLPTLWVPHSYPACAQHAPNEHLLASVASEGLRIMAGLYWDLGEPGLPWQRSARAQ
>Mature_467_residues
TRDQLLESASAWFDAGHFQRDLARRVAWRTESDGGQPGPALGDYLRDDIVPSLIRLGFDCEVQANPVATGGPLLVARRVE
GQDLPTVLTYGHGDVVNGQDKHWREGLSPWQLTVEGDRWYGRGTADNKGQHTINFAALEHTLGARGGRLGYNVTVLLEMG
EEAGSPGLRELCERERELLRADLLIACDGPRVQAQQPTLFLGSRGLVNFSLRLQSRERAYHSGNWGGVLTNPGIVLAHAI
ASMVDERGRIQVDGLRPPALADNIRRALRDVQVGGGTDDPQINPAWGEPGLTAAERLVGWNTLEVLALGAGSAERPVNAI
PPQAVAHCQLRFVPGTPWQQLQSIVRAHLDAHGFDAVEVSVTADSPATRLDLDNPWVGWAMQSMAMSSGKPVTLLPNLAG
SLPNDVFADVLGLPTLWVPHSYPACAQHAPNEHLLASVASEGLRIMAGLYWDLGEPGLPWQRSARAQ

Specific function: Unknown

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21071039, Length=405, Percent_Identity=22.4691358024691, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI271398239, Length=405, Percent_Identity=23.4567901234568, Blast_Score=75, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17563146, Length=298, Percent_Identity=25.8389261744966, Blast_Score=81, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6321159, Length=424, Percent_Identity=25, Blast_Score=97, Evalue=8e-21,
Organism=Saccharomyces cerevisiae, GI6319758, Length=392, Percent_Identity=23.2142857142857, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24585880, Length=173, Percent_Identity=31.2138728323699, Blast_Score=73, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50684; Mature: 50553

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRDQLLESASAWFDAGHFQRDLARRVAWRTESDGGQPGPALGDYLRDDIVPSLIRLGFD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
CEVQANPVATGGPLLVARRVEGQDLPTVLTYGHGDVVNGQDKHWREGLSPWQLTVEGDRW
CEEECCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHCCCCCEEEEEECCCE
YGRGTADNKGQHTINFAALEHTLGARGGRLGYNVTVLLEMGEEAGSPGLRELCERERELL
ECCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHH
RADLLIACDGPRVQAQQPTLFLGSRGLVNFSLRLQSRERAYHSGNWGGVLTNPGIVLAHA
HHCEEEEECCCCCCCCCCEEEECCCCEEEEEEEECHHHHHHHCCCCCCEECCCHHHHHHH
IASMVDERGRIQVDGLRPPALADNIRRALRDVQVGGGTDDPQINPAWGEPGLTAAERLVG
HHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHC
WNTLEVLALGAGSAERPVNAIPPQAVAHCQLRFVPGTPWQQLQSIVRAHLDAHGFDAVEV
CCEEEEEEECCCCCCCCCCCCCCHHEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEE
SVTADSPATRLDLDNPWVGWAMQSMAMSSGKPVTLLPNLAGSLPNDVFADVLGLPTLWVP
EEECCCCCCEECCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHCCCEEECC
HSYPACAQHAPNEHLLASVASEGLRIMAGLYWDLGEPGLPWQRSARAQ
CCCCHHHHCCCCHHHHHHHHHCCHHEEHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRDQLLESASAWFDAGHFQRDLARRVAWRTESDGGQPGPALGDYLRDDIVPSLIRLGFD
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
CEVQANPVATGGPLLVARRVEGQDLPTVLTYGHGDVVNGQDKHWREGLSPWQLTVEGDRW
CEEECCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHCCCCCEEEEEECCCE
YGRGTADNKGQHTINFAALEHTLGARGGRLGYNVTVLLEMGEEAGSPGLRELCERERELL
ECCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHH
RADLLIACDGPRVQAQQPTLFLGSRGLVNFSLRLQSRERAYHSGNWGGVLTNPGIVLAHA
HHCEEEEECCCCCCCCCCEEEECCCCEEEEEEEECHHHHHHHCCCCCCEECCCHHHHHHH
IASMVDERGRIQVDGLRPPALADNIRRALRDVQVGGGTDDPQINPAWGEPGLTAAERLVG
HHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHC
WNTLEVLALGAGSAERPVNAIPPQAVAHCQLRFVPGTPWQQLQSIVRAHLDAHGFDAVEV
CCEEEEEEECCCCCCCCCCCCCCHHEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEE
SVTADSPATRLDLDNPWVGWAMQSMAMSSGKPVTLLPNLAGSLPNDVFADVLGLPTLWVP
EEECCCCCCEECCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHCCCEEECC
HSYPACAQHAPNEHLLASVASEGLRIMAGLYWDLGEPGLPWQRSARAQ
CCCCHHHHCCCCHHHHHHHHHCCHHEEHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA