Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is bugT [H]

Identifier: 91787604

GI number: 91787604

Start: 1775883

End: 1776899

Strand: Direct

Name: bugT [H]

Synonym: Bpro_1722

Alternate gene names: 91787604

Gene position: 1775883-1776899 (Clockwise)

Preceding gene: 91787603

Following gene: 91787605

Centisome position: 34.15

GC content: 64.6

Gene sequence:

>1017_bases
ATGACATCGACATCGACATCGACATCGACATCGACATCGACATCACGCCGCGCGACGCTGATAACTGCCCTGGCCGCTCT
GGTGACCAGCCTGGTGAGCCCGCTGGCCCTGGCCCAGAGCTGGCCCAGCAAGCCCCTCAAGCTGATCGTGCCGTTCCCGC
CGGGCGGCGCAACCGACACCGTGGCTCGCCTGATTGCGGAGCGCCTGGGGCCACGCCTGGGGCAAGCCGTCATCATCGAG
AACAAACCGGGTGCGGCGACCGTCATCGGTGTGGATGCGGTGGTCAAGTCCATCCCCGACGGCCACACGCTGCTGGTCTC
AGGCACCAGCAGCTTCACCGTCGTGCCGGGCTTGCGCAGCAAGCTGCCCTTCGACGTGCTCAAGGATTTGACCCCGATCG
CGCTGGTTGTCAATGCGCCCCTGGTGCTGGTGACGGCGCCGTCCAAGCCCTACCAGCGCCTGTCTGACGTCATTGCGCAA
GCCAGGGCCAAGCCCAAATCGCTGACCTACTCCACCTATGGGCCCGGGACTGCGCCCCATCTTTCCGCGGAGCTGCTGGC
CCACGCCGCCGGTGTCGAACTGGAGGCCGTGCCCTACAAGGGCAGCGCCGAAGCCCTGATAGGCCTGATGCGCGGTGATA
TTGATGTGGGCGTGGAAACCCTCTCGGCCGCCAGTGCGCAGATCAAGGCCGGCAAGCTGCGCGTGCTGGCGGTGACCAGC
GGCAAGCGCACGAGCTTTTTGCCCGAAACGCCGGGCATGGAGGAGCTGCGCCTGCCGCAGGCCAGTTTTGATGGTTTCTA
TGCCGTCGCCGCACCTGCAGGAACGCCTGTGGCGGTGGTCCAGCGGCTGACGCGGGAAATCAGCGAAATCATGGCCATGC
CGGAGGTGAAGGAAAAATGCGCCCAGTTGTCGCTGGAAGCCGTAGCCCTGGGCCCTGACGCGTTGCGTGCAATCATGAAA
ACCGACATCGCCAGGTTTCGTGAACTGGGGGAGCGGATCAAGATCAGTCTGGATTAA

Upstream 100 bases:

>100_bases
GATCTGGGCGAGCCGGGCCTGCCCTGGCAGCGCAGTGCGCGTGCTCAATGAGCCTCACGGAGCCCCTCGCTTGAGTTTTT
TAACCTGAAAAGAGAACAGC

Downstream 100 bases:

>100_bases
CCATTCCCGGGGTGCGGGGAGGGGGTGTGGGTGCCGGTTTTCTACAATGGACCCATGTTTCCACAAGTCACCCGAGATTC
CCCGCTGCTGCACAACCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MTSTSTSTSTSTSTSRRATLITALAALVTSLVSPLALAQSWPSKPLKLIVPFPPGGATDTVARLIAERLGPRLGQAVIIE
NKPGAATVIGVDAVVKSIPDGHTLLVSGTSSFTVVPGLRSKLPFDVLKDLTPIALVVNAPLVLVTAPSKPYQRLSDVIAQ
ARAKPKSLTYSTYGPGTAPHLSAELLAHAAGVELEAVPYKGSAEALIGLMRGDIDVGVETLSAASAQIKAGKLRVLAVTS
GKRTSFLPETPGMEELRLPQASFDGFYAVAAPAGTPVAVVQRLTREISEIMAMPEVKEKCAQLSLEAVALGPDALRAIMK
TDIARFRELGERIKISLD

Sequences:

>Translated_338_residues
MTSTSTSTSTSTSTSRRATLITALAALVTSLVSPLALAQSWPSKPLKLIVPFPPGGATDTVARLIAERLGPRLGQAVIIE
NKPGAATVIGVDAVVKSIPDGHTLLVSGTSSFTVVPGLRSKLPFDVLKDLTPIALVVNAPLVLVTAPSKPYQRLSDVIAQ
ARAKPKSLTYSTYGPGTAPHLSAELLAHAAGVELEAVPYKGSAEALIGLMRGDIDVGVETLSAASAQIKAGKLRVLAVTS
GKRTSFLPETPGMEELRLPQASFDGFYAVAAPAGTPVAVVQRLTREISEIMAMPEVKEKCAQLSLEAVALGPDALRAIMK
TDIARFRELGERIKISLD
>Mature_337_residues
TSTSTSTSTSTSTSRRATLITALAALVTSLVSPLALAQSWPSKPLKLIVPFPPGGATDTVARLIAERLGPRLGQAVIIEN
KPGAATVIGVDAVVKSIPDGHTLLVSGTSSFTVVPGLRSKLPFDVLKDLTPIALVVNAPLVLVTAPSKPYQRLSDVIAQA
RAKPKSLTYSTYGPGTAPHLSAELLAHAAGVELEAVPYKGSAEALIGLMRGDIDVGVETLSAASAQIKAGKLRVLAVTSG
KRTSFLPETPGMEELRLPQASFDGFYAVAAPAGTPVAVVQRLTREISEIMAMPEVKEKCAQLSLEAVALGPDALRAIMKT
DIARFRELGERIKISLD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 35301; Mature: 35170

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTSTSTSTSTSTSRRATLITALAALVTSLVSPLALAQSWPSKPLKLIVPFPPGGATDT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHH
VARLIAERLGPRLGQAVIIENKPGAATVIGVDAVVKSIPDGHTLLVSGTSSFTVVPGLRS
HHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHHHCCCCCEEEEECCCCEEECCCHHH
KLPFDVLKDLTPIALVVNAPLVLVTAPSKPYQRLSDVIAQARAKPKSLTYSTYGPGTAPH
CCCHHHHHCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCH
LSAELLAHAAGVELEAVPYKGSAEALIGLMRGDIDVGVETLSAASAQIKAGKLRVLAVTS
HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHEECCCEEEEEEEC
GKRTSFLPETPGMEELRLPQASFDGFYAVAAPAGTPVAVVQRLTREISEIMAMPEVKEKC
CCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
AQLSLEAVALGPDALRAIMKTDIARFRELGERIKISLD
HHCCHHHEEECHHHHHHHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure 
TSTSTSTSTSTSTSRRATLITALAALVTSLVSPLALAQSWPSKPLKLIVPFPPGGATDT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHH
VARLIAERLGPRLGQAVIIENKPGAATVIGVDAVVKSIPDGHTLLVSGTSSFTVVPGLRS
HHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHHHCCCCCEEEEECCCCEEECCCHHH
KLPFDVLKDLTPIALVVNAPLVLVTAPSKPYQRLSDVIAQARAKPKSLTYSTYGPGTAPH
CCCHHHHHCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCH
LSAELLAHAAGVELEAVPYKGSAEALIGLMRGDIDVGVETLSAASAQIKAGKLRVLAVTS
HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHEECCCEEEEEEEC
GKRTSFLPETPGMEELRLPQASFDGFYAVAAPAGTPVAVVQRLTREISEIMAMPEVKEKC
CCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
AQLSLEAVALGPDALRAIMKTDIARFRELGERIKISLD
HHCCHHHEEECHHHHHHHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11111902; 12910271; 2873570 [H]