| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is bugT [H]
Identifier: 91787604
GI number: 91787604
Start: 1775883
End: 1776899
Strand: Direct
Name: bugT [H]
Synonym: Bpro_1722
Alternate gene names: 91787604
Gene position: 1775883-1776899 (Clockwise)
Preceding gene: 91787603
Following gene: 91787605
Centisome position: 34.15
GC content: 64.6
Gene sequence:
>1017_bases ATGACATCGACATCGACATCGACATCGACATCGACATCGACATCACGCCGCGCGACGCTGATAACTGCCCTGGCCGCTCT GGTGACCAGCCTGGTGAGCCCGCTGGCCCTGGCCCAGAGCTGGCCCAGCAAGCCCCTCAAGCTGATCGTGCCGTTCCCGC CGGGCGGCGCAACCGACACCGTGGCTCGCCTGATTGCGGAGCGCCTGGGGCCACGCCTGGGGCAAGCCGTCATCATCGAG AACAAACCGGGTGCGGCGACCGTCATCGGTGTGGATGCGGTGGTCAAGTCCATCCCCGACGGCCACACGCTGCTGGTCTC AGGCACCAGCAGCTTCACCGTCGTGCCGGGCTTGCGCAGCAAGCTGCCCTTCGACGTGCTCAAGGATTTGACCCCGATCG CGCTGGTTGTCAATGCGCCCCTGGTGCTGGTGACGGCGCCGTCCAAGCCCTACCAGCGCCTGTCTGACGTCATTGCGCAA GCCAGGGCCAAGCCCAAATCGCTGACCTACTCCACCTATGGGCCCGGGACTGCGCCCCATCTTTCCGCGGAGCTGCTGGC CCACGCCGCCGGTGTCGAACTGGAGGCCGTGCCCTACAAGGGCAGCGCCGAAGCCCTGATAGGCCTGATGCGCGGTGATA TTGATGTGGGCGTGGAAACCCTCTCGGCCGCCAGTGCGCAGATCAAGGCCGGCAAGCTGCGCGTGCTGGCGGTGACCAGC GGCAAGCGCACGAGCTTTTTGCCCGAAACGCCGGGCATGGAGGAGCTGCGCCTGCCGCAGGCCAGTTTTGATGGTTTCTA TGCCGTCGCCGCACCTGCAGGAACGCCTGTGGCGGTGGTCCAGCGGCTGACGCGGGAAATCAGCGAAATCATGGCCATGC CGGAGGTGAAGGAAAAATGCGCCCAGTTGTCGCTGGAAGCCGTAGCCCTGGGCCCTGACGCGTTGCGTGCAATCATGAAA ACCGACATCGCCAGGTTTCGTGAACTGGGGGAGCGGATCAAGATCAGTCTGGATTAA
Upstream 100 bases:
>100_bases GATCTGGGCGAGCCGGGCCTGCCCTGGCAGCGCAGTGCGCGTGCTCAATGAGCCTCACGGAGCCCCTCGCTTGAGTTTTT TAACCTGAAAAGAGAACAGC
Downstream 100 bases:
>100_bases CCATTCCCGGGGTGCGGGGAGGGGGTGTGGGTGCCGGTTTTCTACAATGGACCCATGTTTCCACAAGTCACCCGAGATTC CCCGCTGCTGCACAACCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MTSTSTSTSTSTSTSRRATLITALAALVTSLVSPLALAQSWPSKPLKLIVPFPPGGATDTVARLIAERLGPRLGQAVIIE NKPGAATVIGVDAVVKSIPDGHTLLVSGTSSFTVVPGLRSKLPFDVLKDLTPIALVVNAPLVLVTAPSKPYQRLSDVIAQ ARAKPKSLTYSTYGPGTAPHLSAELLAHAAGVELEAVPYKGSAEALIGLMRGDIDVGVETLSAASAQIKAGKLRVLAVTS GKRTSFLPETPGMEELRLPQASFDGFYAVAAPAGTPVAVVQRLTREISEIMAMPEVKEKCAQLSLEAVALGPDALRAIMK TDIARFRELGERIKISLD
Sequences:
>Translated_338_residues MTSTSTSTSTSTSTSRRATLITALAALVTSLVSPLALAQSWPSKPLKLIVPFPPGGATDTVARLIAERLGPRLGQAVIIE NKPGAATVIGVDAVVKSIPDGHTLLVSGTSSFTVVPGLRSKLPFDVLKDLTPIALVVNAPLVLVTAPSKPYQRLSDVIAQ ARAKPKSLTYSTYGPGTAPHLSAELLAHAAGVELEAVPYKGSAEALIGLMRGDIDVGVETLSAASAQIKAGKLRVLAVTS GKRTSFLPETPGMEELRLPQASFDGFYAVAAPAGTPVAVVQRLTREISEIMAMPEVKEKCAQLSLEAVALGPDALRAIMK TDIARFRELGERIKISLD >Mature_337_residues TSTSTSTSTSTSTSRRATLITALAALVTSLVSPLALAQSWPSKPLKLIVPFPPGGATDTVARLIAERLGPRLGQAVIIEN KPGAATVIGVDAVVKSIPDGHTLLVSGTSSFTVVPGLRSKLPFDVLKDLTPIALVVNAPLVLVTAPSKPYQRLSDVIAQA RAKPKSLTYSTYGPGTAPHLSAELLAHAAGVELEAVPYKGSAEALIGLMRGDIDVGVETLSAASAQIKAGKLRVLAVTSG KRTSFLPETPGMEELRLPQASFDGFYAVAAPAGTPVAVVQRLTREISEIMAMPEVKEKCAQLSLEAVALGPDALRAIMKT DIARFRELGERIKISLD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35301; Mature: 35170
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTSTSTSTSTSTSRRATLITALAALVTSLVSPLALAQSWPSKPLKLIVPFPPGGATDT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHH VARLIAERLGPRLGQAVIIENKPGAATVIGVDAVVKSIPDGHTLLVSGTSSFTVVPGLRS HHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHHHCCCCCEEEEECCCCEEECCCHHH KLPFDVLKDLTPIALVVNAPLVLVTAPSKPYQRLSDVIAQARAKPKSLTYSTYGPGTAPH CCCHHHHHCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCH LSAELLAHAAGVELEAVPYKGSAEALIGLMRGDIDVGVETLSAASAQIKAGKLRVLAVTS HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHEECCCEEEEEEEC GKRTSFLPETPGMEELRLPQASFDGFYAVAAPAGTPVAVVQRLTREISEIMAMPEVKEKC CCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHH AQLSLEAVALGPDALRAIMKTDIARFRELGERIKISLD HHCCHHHEEECHHHHHHHHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure TSTSTSTSTSTSTSRRATLITALAALVTSLVSPLALAQSWPSKPLKLIVPFPPGGATDT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHH VARLIAERLGPRLGQAVIIENKPGAATVIGVDAVVKSIPDGHTLLVSGTSSFTVVPGLRS HHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHHHCCCCCEEEEECCCCEEECCCHHH KLPFDVLKDLTPIALVVNAPLVLVTAPSKPYQRLSDVIAQARAKPKSLTYSTYGPGTAPH CCCHHHHHCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCH LSAELLAHAAGVELEAVPYKGSAEALIGLMRGDIDVGVETLSAASAQIKAGKLRVLAVTS HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHEECCCEEEEEEEC GKRTSFLPETPGMEELRLPQASFDGFYAVAAPAGTPVAVVQRLTREISEIMAMPEVKEKC CCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHH AQLSLEAVALGPDALRAIMKTDIARFRELGERIKISLD HHCCHHHEEECHHHHHHHHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11111902; 12910271; 2873570 [H]