| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787489
Identifier: 91787489
GI number: 91787489
Start: 1656872
End: 1657639
Strand: Direct
Name: 91787489
Synonym: Bpro_1605
Alternate gene names: NA
Gene position: 1656872-1657639 (Clockwise)
Preceding gene: 91787488
Following gene: 91787490
Centisome position: 31.86
GC content: 63.15
Gene sequence:
>768_bases ATGCCGTTTTTCAACTTCCGCCGGGGCGGCTCCAACGCTGCTCCCACTGCCGGATCAGCCGTTCAAACGGAAAGCGTGGA GGTGGTGCGCAAGCGCGCCAAACACCGCCTGATCGGCTCGGCCGTGCTGGTGCTGATTGGCGTGGTGGGTTTTCCGCTGC TGTTTGATACCCAGCCGCGGCCGATTGCCGTGGACATTCCGATTGAAATTCCCGCCAAGGGCACGGTCAAACCTCTCGCC GCTCCCGCGCCTTCCGAAAAAGTGGCCGCCACCGCCAGCCTGGCCCCGCAGGAAGAAATCCTGCCATCCAAACAGGCTGC GGGCCCTGTAACGCCGGCGCCTGCAGCTATCAAAAGCGAAGCAAAGCCGGAGTCAAAAGCTGAACCTAAACCTGAACCCA AATCCGAGCCCAAGCCGGAAGTGAAGGCGGAGCCCAAAGCAGCCCCCAAGCCAGCCGCTGCGAGCGACGATGCGGTGCGG GCCAGCGCGTTGCTCAGTGGCTCGTCCGCGCCGGCCGGCAAGGTAGCCGAAGAGGCCGCTGGCCGTGTCGTGGTGCAGGT TGGTGCCTTTGCCGATGTGGCCAAGGCCCGCGAAGCGCGGCTCAAGCTGGAAAAAGCCGGTCTGAAAACCTATACACAGG TCGCCGAAACCAAAGATGGCAAGCGTATTCGTGTCCGCGTCGGGCCGTTTGCCAGCAGGGCAGAGGCTGAAACGGCGGCC AGCAAGATCAAGGCCCTTGATTTGCCGGCCGCCATCCTGACCTTGTAA
Upstream 100 bases:
>100_bases GCTTCTTGATGCCGGATAAACCTGTCTGACCCGGGGCCTGTGATGCCTGGAAATGCAGACCGACAGCCCACGTTAACCGT CAACGGATTCAAGCCACACC
Downstream 100 bases:
>100_bases GCAGCGGGTCGGGACATTCGTGGCGGCTGTTGACTGGATTTTGCTGGCGGTATTGGTCTTCTCGCTGGTGCTGGGCGCCT GGCGCGGGCTGGTTTATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Sporulation Domain Protein; Sporulation ; Sporulation Related Protein; DedD Protein
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MPFFNFRRGGSNAAPTAGSAVQTESVEVVRKRAKHRLIGSAVLVLIGVVGFPLLFDTQPRPIAVDIPIEIPAKGTVKPLA APAPSEKVAATASLAPQEEILPSKQAAGPVTPAPAAIKSEAKPESKAEPKPEPKSEPKPEVKAEPKAAPKPAAASDDAVR ASALLSGSSAPAGKVAEEAAGRVVVQVGAFADVAKAREARLKLEKAGLKTYTQVAETKDGKRIRVRVGPFASRAEAETAA SKIKALDLPAAILTL
Sequences:
>Translated_255_residues MPFFNFRRGGSNAAPTAGSAVQTESVEVVRKRAKHRLIGSAVLVLIGVVGFPLLFDTQPRPIAVDIPIEIPAKGTVKPLA APAPSEKVAATASLAPQEEILPSKQAAGPVTPAPAAIKSEAKPESKAEPKPEPKSEPKPEVKAEPKAAPKPAAASDDAVR ASALLSGSSAPAGKVAEEAAGRVVVQVGAFADVAKAREARLKLEKAGLKTYTQVAETKDGKRIRVRVGPFASRAEAETAA SKIKALDLPAAILTL >Mature_254_residues PFFNFRRGGSNAAPTAGSAVQTESVEVVRKRAKHRLIGSAVLVLIGVVGFPLLFDTQPRPIAVDIPIEIPAKGTVKPLAA PAPSEKVAATASLAPQEEILPSKQAAGPVTPAPAAIKSEAKPESKAEPKPEPKSEPKPEVKAEPKAAPKPAAASDDAVRA SALLSGSSAPAGKVAEEAAGRVVVQVGAFADVAKAREARLKLEKAGLKTYTQVAETKDGKRIRVRVGPFASRAEAETAAS KIKALDLPAAILTL
Specific function: Unknown
COG id: COG3147
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26272; Mature: 26140
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFFNFRRGGSNAAPTAGSAVQTESVEVVRKRAKHRLIGSAVLVLIGVVGFPLLFDTQPR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCC PIAVDIPIEIPAKGTVKPLAAPAPSEKVAATASLAPQEEILPSKQAAGPVTPAPAAIKSE CEEEECCEECCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHCC AKPESKAEPKPEPKSEPKPEVKAEPKAAPKPAAASDDAVRASALLSGSSAPAGKVAEEAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHC GRVVVQVGAFADVAKAREARLKLEKAGLKTYTQVAETKDGKRIRVRVGPFASRAEAETAA CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH SKIKALDLPAAILTL HHHHHHCCCHHHHCC >Mature Secondary Structure PFFNFRRGGSNAAPTAGSAVQTESVEVVRKRAKHRLIGSAVLVLIGVVGFPLLFDTQPR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCC PIAVDIPIEIPAKGTVKPLAAPAPSEKVAATASLAPQEEILPSKQAAGPVTPAPAAIKSE CEEEECCEECCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHCC AKPESKAEPKPEPKSEPKPEVKAEPKAAPKPAAASDDAVRASALLSGSSAPAGKVAEEAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHC GRVVVQVGAFADVAKAREARLKLEKAGLKTYTQVAETKDGKRIRVRVGPFASRAEAETAA CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH SKIKALDLPAAILTL HHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA