Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91787489

Identifier: 91787489

GI number: 91787489

Start: 1656872

End: 1657639

Strand: Direct

Name: 91787489

Synonym: Bpro_1605

Alternate gene names: NA

Gene position: 1656872-1657639 (Clockwise)

Preceding gene: 91787488

Following gene: 91787490

Centisome position: 31.86

GC content: 63.15

Gene sequence:

>768_bases
ATGCCGTTTTTCAACTTCCGCCGGGGCGGCTCCAACGCTGCTCCCACTGCCGGATCAGCCGTTCAAACGGAAAGCGTGGA
GGTGGTGCGCAAGCGCGCCAAACACCGCCTGATCGGCTCGGCCGTGCTGGTGCTGATTGGCGTGGTGGGTTTTCCGCTGC
TGTTTGATACCCAGCCGCGGCCGATTGCCGTGGACATTCCGATTGAAATTCCCGCCAAGGGCACGGTCAAACCTCTCGCC
GCTCCCGCGCCTTCCGAAAAAGTGGCCGCCACCGCCAGCCTGGCCCCGCAGGAAGAAATCCTGCCATCCAAACAGGCTGC
GGGCCCTGTAACGCCGGCGCCTGCAGCTATCAAAAGCGAAGCAAAGCCGGAGTCAAAAGCTGAACCTAAACCTGAACCCA
AATCCGAGCCCAAGCCGGAAGTGAAGGCGGAGCCCAAAGCAGCCCCCAAGCCAGCCGCTGCGAGCGACGATGCGGTGCGG
GCCAGCGCGTTGCTCAGTGGCTCGTCCGCGCCGGCCGGCAAGGTAGCCGAAGAGGCCGCTGGCCGTGTCGTGGTGCAGGT
TGGTGCCTTTGCCGATGTGGCCAAGGCCCGCGAAGCGCGGCTCAAGCTGGAAAAAGCCGGTCTGAAAACCTATACACAGG
TCGCCGAAACCAAAGATGGCAAGCGTATTCGTGTCCGCGTCGGGCCGTTTGCCAGCAGGGCAGAGGCTGAAACGGCGGCC
AGCAAGATCAAGGCCCTTGATTTGCCGGCCGCCATCCTGACCTTGTAA

Upstream 100 bases:

>100_bases
GCTTCTTGATGCCGGATAAACCTGTCTGACCCGGGGCCTGTGATGCCTGGAAATGCAGACCGACAGCCCACGTTAACCGT
CAACGGATTCAAGCCACACC

Downstream 100 bases:

>100_bases
GCAGCGGGTCGGGACATTCGTGGCGGCTGTTGACTGGATTTTGCTGGCGGTATTGGTCTTCTCGCTGGTGCTGGGCGCCT
GGCGCGGGCTGGTTTATGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Sporulation Domain Protein; Sporulation ; Sporulation Related Protein; DedD Protein

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MPFFNFRRGGSNAAPTAGSAVQTESVEVVRKRAKHRLIGSAVLVLIGVVGFPLLFDTQPRPIAVDIPIEIPAKGTVKPLA
APAPSEKVAATASLAPQEEILPSKQAAGPVTPAPAAIKSEAKPESKAEPKPEPKSEPKPEVKAEPKAAPKPAAASDDAVR
ASALLSGSSAPAGKVAEEAAGRVVVQVGAFADVAKAREARLKLEKAGLKTYTQVAETKDGKRIRVRVGPFASRAEAETAA
SKIKALDLPAAILTL

Sequences:

>Translated_255_residues
MPFFNFRRGGSNAAPTAGSAVQTESVEVVRKRAKHRLIGSAVLVLIGVVGFPLLFDTQPRPIAVDIPIEIPAKGTVKPLA
APAPSEKVAATASLAPQEEILPSKQAAGPVTPAPAAIKSEAKPESKAEPKPEPKSEPKPEVKAEPKAAPKPAAASDDAVR
ASALLSGSSAPAGKVAEEAAGRVVVQVGAFADVAKAREARLKLEKAGLKTYTQVAETKDGKRIRVRVGPFASRAEAETAA
SKIKALDLPAAILTL
>Mature_254_residues
PFFNFRRGGSNAAPTAGSAVQTESVEVVRKRAKHRLIGSAVLVLIGVVGFPLLFDTQPRPIAVDIPIEIPAKGTVKPLAA
PAPSEKVAATASLAPQEEILPSKQAAGPVTPAPAAIKSEAKPESKAEPKPEPKSEPKPEVKAEPKAAPKPAAASDDAVRA
SALLSGSSAPAGKVAEEAAGRVVVQVGAFADVAKAREARLKLEKAGLKTYTQVAETKDGKRIRVRVGPFASRAEAETAAS
KIKALDLPAAILTL

Specific function: Unknown

COG id: COG3147

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26272; Mature: 26140

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFFNFRRGGSNAAPTAGSAVQTESVEVVRKRAKHRLIGSAVLVLIGVVGFPLLFDTQPR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCC
PIAVDIPIEIPAKGTVKPLAAPAPSEKVAATASLAPQEEILPSKQAAGPVTPAPAAIKSE
CEEEECCEECCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHCC
AKPESKAEPKPEPKSEPKPEVKAEPKAAPKPAAASDDAVRASALLSGSSAPAGKVAEEAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHC
GRVVVQVGAFADVAKAREARLKLEKAGLKTYTQVAETKDGKRIRVRVGPFASRAEAETAA
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
SKIKALDLPAAILTL
HHHHHHCCCHHHHCC
>Mature Secondary Structure 
PFFNFRRGGSNAAPTAGSAVQTESVEVVRKRAKHRLIGSAVLVLIGVVGFPLLFDTQPR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCC
PIAVDIPIEIPAKGTVKPLAAPAPSEKVAATASLAPQEEILPSKQAAGPVTPAPAAIKSE
CEEEECCEECCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHCC
AKPESKAEPKPEPKSEPKPEVKAEPKAAPKPAAASDDAVRASALLSGSSAPAGKVAEEAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHC
GRVVVQVGAFADVAKAREARLKLEKAGLKTYTQVAETKDGKRIRVRVGPFASRAEAETAA
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
SKIKALDLPAAILTL
HHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA