| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is cvpA [H]
Identifier: 91787490
GI number: 91787490
Start: 1657659
End: 1658144
Strand: Direct
Name: cvpA [H]
Synonym: Bpro_1606
Alternate gene names: 91787490
Gene position: 1657659-1658144 (Clockwise)
Preceding gene: 91787489
Following gene: 91787491
Centisome position: 31.88
GC content: 61.32
Gene sequence:
>486_bases GTGGCGGCTGTTGACTGGATTTTGCTGGCGGTATTGGTCTTCTCGCTGGTGCTGGGCGCCTGGCGCGGGCTGGTTTATGA GGTTTTGTCGGTACTGGGGTGGGTGGTGGCGTTTTTTGCGGCGCAATGGTTTGCGCCCGAGGTGGCCGCCCGGTTGCCCA TCCAGTCCGCCTCGAATCCGGTGCGCTATGCGGCTGCGTTTGTGCTGGTATTCATTGTTGCGGTGTTTGCGGCCGGTTTG CTGGCTTTTTTGCTGAAGAAGCTGGTCGAAGCCGTTGGCTTGCGGCCGGTGGACCGCGTGATGGGCGCGGGATTTGGCCT GCTGCGCGGACTGATCCTGCTGCTGGCCGCCACGGTGGTGATTGACATGACGGGGCTCAAGACCACTGAATGGTGGCGGG AGTCCAGAGGCGCGGCCATGCTGACGGCCACGCTCAAAGGTTTGCAGCCGGTTCTGCCGGAGAAGTTTGCGAAGTATTTG AAATAG
Upstream 100 bases:
>100_bases TTTGCCAGCAGGGCAGAGGCTGAAACGGCGGCCAGCAAGATCAAGGCCCTTGATTTGCCGGCCGCCATCCTGACCTTGTA AGCAGCGGGTCGGGACATTC
Downstream 100 bases:
>100_bases AAGTATGACCCCCACGCTTTTCACTTCGTGTGAGGTGCGGCCCCCAAAACGGGCGCATTTTCCCCGGGGCGGTCCAGCGG AAAATTTATGAATGGAAATA
Product: colicin V production protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MAAVDWILLAVLVFSLVLGAWRGLVYEVLSVLGWVVAFFAAQWFAPEVAARLPIQSASNPVRYAAAFVLVFIVAVFAAGL LAFLLKKLVEAVGLRPVDRVMGAGFGLLRGLILLLAATVVIDMTGLKTTEWWRESRGAAMLTATLKGLQPVLPEKFAKYL K
Sequences:
>Translated_161_residues MAAVDWILLAVLVFSLVLGAWRGLVYEVLSVLGWVVAFFAAQWFAPEVAARLPIQSASNPVRYAAAFVLVFIVAVFAAGL LAFLLKKLVEAVGLRPVDRVMGAGFGLLRGLILLLAATVVIDMTGLKTTEWWRESRGAAMLTATLKGLQPVLPEKFAKYL K >Mature_160_residues AAVDWILLAVLVFSLVLGAWRGLVYEVLSVLGWVVAFFAAQWFAPEVAARLPIQSASNPVRYAAAFVLVFIVAVFAAGLL AFLLKKLVEAVGLRPVDRVMGAGFGLLRGLILLLAATVVIDMTGLKTTEWWRESRGAAMLTATLKGLQPVLPEKFAKYLK
Specific function: Required For Colicin V Production From Plasmid Incfi Colv3-K30. [C]
COG id: COG1286
COG function: function code R; Uncharacterized membrane protein, required for colicin V production
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli CvpA [H]
Homologues:
Organism=Escherichia coli, GI1788652, Length=137, Percent_Identity=32.1167883211679, Blast_Score=70, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003825 [H]
Pfam domain/function: PF02674 Colicin_V [H]
EC number: NA
Molecular weight: Translated: 17459; Mature: 17328
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVDWILLAVLVFSLVLGAWRGLVYEVLSVLGWVVAFFAAQWFAPEVAARLPIQSASNP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCH VRYAAAFVLVFIVAVFAAGLLAFLLKKLVEAVGLRPVDRVMGAGFGLLRGLILLLAATVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHH IDMTGLKTTEWWRESRGAAMLTATLKGLQPVLPEKFAKYLK HHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCC >Mature Secondary Structure AAVDWILLAVLVFSLVLGAWRGLVYEVLSVLGWVVAFFAAQWFAPEVAARLPIQSASNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCH VRYAAAFVLVFIVAVFAAGLLAFLLKKLVEAVGLRPVDRVMGAGFGLLRGLILLLAATVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHH IDMTGLKTTEWWRESRGAAMLTATLKGLQPVLPEKFAKYLK HHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]