| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is pip [H]
Identifier: 91787487
GI number: 91787487
Start: 1654162
End: 1655151
Strand: Direct
Name: pip [H]
Synonym: Bpro_1603
Alternate gene names: 91787487
Gene position: 1654162-1655151 (Clockwise)
Preceding gene: 91787482
Following gene: 91787488
Centisome position: 31.81
GC content: 68.18
Gene sequence:
>990_bases ATGACCTCCTCGGCCTCTGACCTCCCGACCCGCCCTTCCGGCCGCTCCAGGCCGTTTCTCTACCCGCCCATCGAGCCTTT CCGCACCGGCGTGCTGGAGACGGGTGACGGCCATTCGATTTACTGGGAGCTGTGCGGCAACCCGGCAGGCAAGCCCGCGG TTTTCCTGCACGGCGGGCCTGGCTCCGGCTGCTCCCCCGACCACCGGCGGCTGTTTGACCCCAAGCGCTACTGTGTTTTG CTGTTCGACCAGCGCGGCTGCGGCCGCTCGCGCCCCAGTGCCTCGCTGGACAACAACACCACCTGGCACCTGGTGGCCGA CATCGAGCGGCTGCGCACCCTGCTGGGCGTGGAACGCTGGGTGGTATTTGGCGGTTCCTGGGGCAGCTCACTGGCGCTGG CCTATGCCCAGACGCACCCCGCCCAGGTGTCGGCCCTCATCGTGCGCGGCATTTTTACGCTGCGGCGCGCCGAACTGCTC TGGTACTACCAGGAGGGGGCCTCCTGGCTGTTTCCGGACCTGTGGGAGGCGTTTCTGGCGCCCATCCCGCCGGCTGAGCG AGGCGATCTGATGGCCGCCTACCGCAAGCGGCTGGTGGGGTCCAACCGGGCCGAGCAGCTGGCCTGCGCCCGGGCCTGGA GCCTGTGGGAGGGCCAGACCATCACGCTGCTGCCCGATGAGGCCGCCACCGCCAAACATGCAGCGGATGACTTCGCGCTG GCATTCGCCCGCATCGAAAACCATTACTTCGTGCATGCCGGCTGGCTGGAGGAGGGCCAGCTGATCCGTGACGCCGGCAA GCTGGCTGGCATTCCCGGCGTCATCGTGCAGGGACGCTACGACATGGCCACGCCCGCCAAAACCGCCTGGGACCTGCACC GCGCCTGGCCGGAGGCGGACTTTCACCTGATCGACGATGCCGGGCACGCCTTCAATGAGCCTGGCATCCTGCAGCAGCTG ATGGCCGCGACCGACCGTTTCGCAGCATGA
Upstream 100 bases:
>100_bases GTTGATGGTGGGCCAACACTGGAATAATGCCAGCACGCCCCTGCAGTAGCCCGTAGCTGTTGCGGCCTTTTCCCTGCCCC CATTTTGATGGACGACGCCC
Downstream 100 bases:
>100_bases ACGAGCGCTGGATGAGGCGTCTCGCGTTAGCAGGGGCCGCCGGTCCGGCTTTGCCGGCCGCAGGCGCCGCCCCCTGCAAG GGGGGAGGACCCTACACGCA
Product: prolyl aminopeptidase
Products: NA
Alternate protein names: PIP; Prolyl aminopeptidase; PAP [H]
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MTSSASDLPTRPSGRSRPFLYPPIEPFRTGVLETGDGHSIYWELCGNPAGKPAVFLHGGPGSGCSPDHRRLFDPKRYCVL LFDQRGCGRSRPSASLDNNTTWHLVADIERLRTLLGVERWVVFGGSWGSSLALAYAQTHPAQVSALIVRGIFTLRRAELL WYYQEGASWLFPDLWEAFLAPIPPAERGDLMAAYRKRLVGSNRAEQLACARAWSLWEGQTITLLPDEAATAKHAADDFAL AFARIENHYFVHAGWLEEGQLIRDAGKLAGIPGVIVQGRYDMATPAKTAWDLHRAWPEADFHLIDDAGHAFNEPGILQQL MAATDRFAA
Sequences:
>Translated_329_residues MTSSASDLPTRPSGRSRPFLYPPIEPFRTGVLETGDGHSIYWELCGNPAGKPAVFLHGGPGSGCSPDHRRLFDPKRYCVL LFDQRGCGRSRPSASLDNNTTWHLVADIERLRTLLGVERWVVFGGSWGSSLALAYAQTHPAQVSALIVRGIFTLRRAELL WYYQEGASWLFPDLWEAFLAPIPPAERGDLMAAYRKRLVGSNRAEQLACARAWSLWEGQTITLLPDEAATAKHAADDFAL AFARIENHYFVHAGWLEEGQLIRDAGKLAGIPGVIVQGRYDMATPAKTAWDLHRAWPEADFHLIDDAGHAFNEPGILQQL MAATDRFAA >Mature_328_residues TSSASDLPTRPSGRSRPFLYPPIEPFRTGVLETGDGHSIYWELCGNPAGKPAVFLHGGPGSGCSPDHRRLFDPKRYCVLL FDQRGCGRSRPSASLDNNTTWHLVADIERLRTLLGVERWVVFGGSWGSSLALAYAQTHPAQVSALIVRGIFTLRRAELLW YYQEGASWLFPDLWEAFLAPIPPAERGDLMAAYRKRLVGSNRAEQLACARAWSLWEGQTITLLPDEAATAKHAADDFALA FARIENHYFVHAGWLEEGQLIRDAGKLAGIPGVIVQGRYDMATPAKTAWDLHRAWPEADFHLIDDAGHAFNEPGILQQLM AATDRFAA
Specific function: Specifically catalyzes the removal of N-terminal proline residues from peptides [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR005944 - InterPro: IPR002410 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.4.11.5 [H]
Molecular weight: Translated: 36421; Mature: 36289
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSASDLPTRPSGRSRPFLYPPIEPFRTGVLETGDGHSIYWELCGNPAGKPAVFLHGGP CCCCCCCCCCCCCCCCCCEECCCCCHHHCCCEECCCCCEEEEEECCCCCCCCEEEEECCC GSGCSPDHRRLFDPKRYCVLLFDQRGCGRSRPSASLDNNTTWHLVADIERLRTLLGVERW CCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCEE VVFGGSWGSSLALAYAQTHPAQVSALIVRGIFTLRRAELLWYYQEGASWLFPDLWEAFLA EEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHC PIPPAERGDLMAAYRKRLVGSNRAEQLACARAWSLWEGQTITLLPDEAATAKHAADDFAL CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHH AFARIENHYFVHAGWLEEGQLIRDAGKLAGIPGVIVQGRYDMATPAKTAWDLHRAWPEAD HHHHHCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCC FHLIDDAGHAFNEPGILQQLMAATDRFAA EEEEECCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TSSASDLPTRPSGRSRPFLYPPIEPFRTGVLETGDGHSIYWELCGNPAGKPAVFLHGGP CCCCCCCCCCCCCCCCCEECCCCCHHHCCCEECCCCCEEEEEECCCCCCCCEEEEECCC GSGCSPDHRRLFDPKRYCVLLFDQRGCGRSRPSASLDNNTTWHLVADIERLRTLLGVERW CCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCEE VVFGGSWGSSLALAYAQTHPAQVSALIVRGIFTLRRAELLWYYQEGASWLFPDLWEAFLA EEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHC PIPPAERGDLMAAYRKRLVGSNRAEQLACARAWSLWEGQTITLLPDEAATAKHAADDFAL CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHH AFARIENHYFVHAGWLEEGQLIRDAGKLAGIPGVIVQGRYDMATPAKTAWDLHRAWPEAD HHHHHCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCC FHLIDDAGHAFNEPGILQQLMAATDRFAA EEEEECCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9348090; 11011150; 10467172 [H]