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The map label for this gene is yiaD [H]

Identifier: 91787475

GI number: 91787475

Start: 1644083

End: 1644766

Strand: Reverse

Name: yiaD [H]

Synonym: Bpro_1591

Alternate gene names: 91787475

Gene position: 1644766-1644083 (Counterclockwise)

Preceding gene: 91787479

Following gene: 91787473

Centisome position: 31.63

GC content: 64.18

Gene sequence:

>684_bases
ATGAACATAAACATGAACATGAACAAACTGGCCATCACAGCCCTGACATCCGCAGCACTCGCCATTGGCGGCCTCTCCGG
TTGCGCCAACATGAGCGAAACCCAGCAGGATACGGCCAAGGGCGCGGGCATTGGCGCCTTGGCCGGCGCGGTGCTGGGCG
CGGCAACCGGTGGCTCAAAAGGAGCTGCCACCGGTGCAGTGCTGGGCGGCGCCGTCGGTGCGGGTGGCGGCTATATCTGG
TCCAAGAAAATGCAGGAACAGAAAGCGGCCATGGAGCGCGCTACCGCCGGCACCGGTGTGGCGGTAAGCCAGACCCCCGA
CAACCGCCTGAAGCTGGACATTCCCAGCGACGTGTCGTTTGACGTGGGCCGCGCCGCCATCAAGCCCAACTTCGCGCCTA
TCCTGAACCAGTTTGCCACCAGCCTGAACCAGAACCAGGTCACCACGGTGACCATCATCGGCCACACCGACAGCACCGGT
TCGGATGCGATCAACAACCCGCTGTCCGTAGACCGCGCCAATGCAGCCCGCGATTACCTGGTGAGCCGCGGCGTGGCCCG
CACCCGCATCGCAACCGATGGCCGCGGTTCACGCGAGCCGGTTGCCGACAACAACACGCAGCAAGGCCGCGACAAGAACC
GCCGTGTCGAGATCTATGTGGCCGAGCAGGTCGCTGGGCGATAA

Upstream 100 bases:

>100_bases
CGCTTGTCTTACAAATCGTCACCTTTCGCTGGGCGTACCATCTGCCTGCCAGCGCTTTGCCGCGCTGCCAAGCCAATCAA
TTTCCATGAGGAGCTTTTCG

Downstream 100 bases:

>100_bases
CAGACACACCCCTGTCGGCGCTCACTTCGTGTAGCGCCTTCTCCTCTTGCAGGGGACGGCGCCTGCGGCCTGGCGTAGCC
AGATCCGCGGCGCCTGCTGG

Product: OmpA/MotB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MNINMNMNKLAITALTSAALAIGGLSGCANMSETQQDTAKGAGIGALAGAVLGAATGGSKGAATGAVLGGAVGAGGGYIW
SKKMQEQKAAMERATAGTGVAVSQTPDNRLKLDIPSDVSFDVGRAAIKPNFAPILNQFATSLNQNQVTTVTIIGHTDSTG
SDAINNPLSVDRANAARDYLVSRGVARTRIATDGRGSREPVADNNTQQGRDKNRRVEIYVAEQVAGR

Sequences:

>Translated_227_residues
MNINMNMNKLAITALTSAALAIGGLSGCANMSETQQDTAKGAGIGALAGAVLGAATGGSKGAATGAVLGGAVGAGGGYIW
SKKMQEQKAAMERATAGTGVAVSQTPDNRLKLDIPSDVSFDVGRAAIKPNFAPILNQFATSLNQNQVTTVTIIGHTDSTG
SDAINNPLSVDRANAARDYLVSRGVARTRIATDGRGSREPVADNNTQQGRDKNRRVEIYVAEQVAGR
>Mature_227_residues
MNINMNMNKLAITALTSAALAIGGLSGCANMSETQQDTAKGAGIGALAGAVLGAATGGSKGAATGAVLGGAVGAGGGYIW
SKKMQEQKAAMERATAGTGVAVSQTPDNRLKLDIPSDVSFDVGRAAIKPNFAPILNQFATSLNQNQVTTVTIIGHTDSTG
SDAINNPLSVDRANAARDYLVSRGVARTRIATDGRGSREPVADNNTQQGRDKNRRVEIYVAEQVAGR

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential). Cell inner membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=211, Percent_Identity=39.3364928909953, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1787191, Length=121, Percent_Identity=33.0578512396694, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 23200; Mature: 23200

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINMNMNKLAITALTSAALAIGGLSGCANMSETQQDTAKGAGIGALAGAVLGAATGGSK
CCCCCCCHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
GAATGAVLGGAVGAGGGYIWSKKMQEQKAAMERATAGTGVAVSQTPDNRLKLDIPSDVSF
CCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCCC
DVGRAAIKPNFAPILNQFATSLNQNQVTTVTIIGHTDSTGSDAINNPLSVDRANAARDYL
CCCCHHCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHCCCCCCCCCHHHHHHHH
VSRGVARTRIATDGRGSREPVADNNTQQGRDKNRRVEIYVAEQVAGR
HHCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MNINMNMNKLAITALTSAALAIGGLSGCANMSETQQDTAKGAGIGALAGAVLGAATGGSK
CCCCCCCHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
GAATGAVLGGAVGAGGGYIWSKKMQEQKAAMERATAGTGVAVSQTPDNRLKLDIPSDVSF
CCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCCC
DVGRAAIKPNFAPILNQFATSLNQNQVTTVTIIGHTDSTGSDAINNPLSVDRANAARDYL
CCCCHHCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHCCCCCCCCCHHHHHHHH
VSRGVARTRIATDGRGSREPVADNNTQQGRDKNRRVEIYVAEQVAGR
HHCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2180922 [H]