| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787473
Identifier: 91787473
GI number: 91787473
Start: 1641098
End: 1642129
Strand: Reverse
Name: 91787473
Synonym: Bpro_1589
Alternate gene names: NA
Gene position: 1642129-1641098 (Counterclockwise)
Preceding gene: 91787475
Following gene: 91787472
Centisome position: 31.58
GC content: 65.5
Gene sequence:
>1032_bases ATGTACAAAGAAAAACGTTCTTCCCGCAGCGAGTTTGTCCCTATACGCGGGCTCAGCTACCACGTCCAGGTCTGGCCGGC CGCAGCTGGCCCCGCCTCCGCCTCCACCCGCCCGCCCCTGGTGCTGGTGCATGGCTGGATGGACGTCGCGGCCTCCTGGC AGTTCATGGTCGATGCCTTGTCAGACGCGTTTGCGCAGGGCCGCACGATTATTGCGCCTGACTGGCGCGGCTTTGGCCTG ACTTGCAGCGCCGAGCAGCGCCACGTGGGGGACGCCCAATTTTCCGCCGGGCCGCCCCAAGGAAAATTAGCCCCCTCGGG GGGAAGCGCATTACACGAAGTGAAAAGCGTGGGGGCCGCTGACACCTATTGGTTCGCCGACTACCTGGCCGACCTGGACT TCCTGCTGGACCACTATGCGGCCGGCCAGGCGGTGGACCTGGTGGGGCACAGCATGGGCGGCAATGTAGCCATGCTCTAC GCCGGCGTGCGGCCGGCACGCATTCGCAAGCTCGTCAACCTCGAAGGGTTTGGCCTGCCGGCCAGCAAACCCAGCCAGGC CCCCGCGCGCTATGCGAAATGGATGGACGAGCTCAAAAGCCTGCACCGGGGCGAACTCGACCTGAAGGCCTACAACGACG TGGACGGCGTGGCGCGCCGGCTCATGAGGACCAACCCCCGGCTCTCGTCCGACAAGGCCCACTGGCTGGCCAACCATTGG GCCCGCCCCGACGCCAGCGGCAAATGGCGAATTCTGGGCGATGCCGCGCACAAGATCACCAGCGCGCACCTGTACCGGCT GGACGAAGCGCTGGAGATCTACCGGCAGATCAGCGCGCCCACGCTGTCCGTTGAGGCGTCTGACGACTCCCTGGCGACCT GGTGGAAGGGCTCCTACACCCTGGCGCAATACCACGAAAGGCTCAAGCAGATACCCCAAGCGCAGGTCGCCGTGGTTCAG GATGCGGGCCACATGCTGCACCATGACCAGCCCGAGCAGCTGGCCAGGCGGATCGAGGATTTCCTGGGTTAA
Upstream 100 bases:
>100_bases TGGCTGCGTAGTGGTCTGCCGCCGGGCCCGACGGCCCTCCCGCGGGCTTGTCCCTGTTTTGACTGCGTTTCAACTCGGGC CTCCTTATGATGAGGACCCA
Downstream 100 bases:
>100_bases GGGCCGCACGGTTCAGTCAAGGGCCCGTAAGCTCCCTCCCCTTCCGGGGGAGGGTTGGGGTGGGGGCCAGCGGCGACCAG GTCAACACGGCGGCCCGACG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase; Alpha/Beta Hydrolase; Hydrolase Protein; Alpha/Beta Fold Family Hydrolase; Esterase; Hydrolase Or Acytransferase; Hydrolase Or Acetyltransferase; Alpha/Beta Superfamily Hydrolase/Acyltransferase
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MYKEKRSSRSEFVPIRGLSYHVQVWPAAAGPASASTRPPLVLVHGWMDVAASWQFMVDALSDAFAQGRTIIAPDWRGFGL TCSAEQRHVGDAQFSAGPPQGKLAPSGGSALHEVKSVGAADTYWFADYLADLDFLLDHYAAGQAVDLVGHSMGGNVAMLY AGVRPARIRKLVNLEGFGLPASKPSQAPARYAKWMDELKSLHRGELDLKAYNDVDGVARRLMRTNPRLSSDKAHWLANHW ARPDASGKWRILGDAAHKITSAHLYRLDEALEIYRQISAPTLSVEASDDSLATWWKGSYTLAQYHERLKQIPQAQVAVVQ DAGHMLHHDQPEQLARRIEDFLG
Sequences:
>Translated_343_residues MYKEKRSSRSEFVPIRGLSYHVQVWPAAAGPASASTRPPLVLVHGWMDVAASWQFMVDALSDAFAQGRTIIAPDWRGFGL TCSAEQRHVGDAQFSAGPPQGKLAPSGGSALHEVKSVGAADTYWFADYLADLDFLLDHYAAGQAVDLVGHSMGGNVAMLY AGVRPARIRKLVNLEGFGLPASKPSQAPARYAKWMDELKSLHRGELDLKAYNDVDGVARRLMRTNPRLSSDKAHWLANHW ARPDASGKWRILGDAAHKITSAHLYRLDEALEIYRQISAPTLSVEASDDSLATWWKGSYTLAQYHERLKQIPQAQVAVVQ DAGHMLHHDQPEQLARRIEDFLG >Mature_343_residues MYKEKRSSRSEFVPIRGLSYHVQVWPAAAGPASASTRPPLVLVHGWMDVAASWQFMVDALSDAFAQGRTIIAPDWRGFGL TCSAEQRHVGDAQFSAGPPQGKLAPSGGSALHEVKSVGAADTYWFADYLADLDFLLDHYAAGQAVDLVGHSMGGNVAMLY AGVRPARIRKLVNLEGFGLPASKPSQAPARYAKWMDELKSLHRGELDLKAYNDVDGVARRLMRTNPRLSSDKAHWLANHW ARPDASGKWRILGDAAHKITSAHLYRLDEALEIYRQISAPTLSVEASDDSLATWWKGSYTLAQYHERLKQIPQAQVAVVQ DAGHMLHHDQPEQLARRIEDFLG
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37885; Mature: 37885
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKEKRSSRSEFVPIRGLSYHVQVWPAAAGPASASTRPPLVLVHGWMDVAASWQFMVDAL CCCCHHCCCCCEEEECCCEEEEEEEECCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHH SDAFAQGRTIIAPDWRGFGLTCSAEQRHVGDAQFSAGPPQGKLAPSGGSALHEVKSVGAA HHHHHCCCEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC DTYWFADYLADLDFLLDHYAAGQAVDLVGHSMGGNVAMLYAGVRPARIRKLVNLEGFGLP HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCCC ASKPSQAPARYAKWMDELKSLHRGELDLKAYNDVDGVARRLMRTNPRLSSDKAHWLANHW CCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHC ARPDASGKWRILGDAAHKITSAHLYRLDEALEIYRQISAPTLSVEASDDSLATWWKGSYT CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEHHCCCCCH LAQYHERLKQIPQAQVAVVQDAGHMLHHDQPEQLARRIEDFLG HHHHHHHHHHCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MYKEKRSSRSEFVPIRGLSYHVQVWPAAAGPASASTRPPLVLVHGWMDVAASWQFMVDAL CCCCHHCCCCCEEEECCCEEEEEEEECCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHH SDAFAQGRTIIAPDWRGFGLTCSAEQRHVGDAQFSAGPPQGKLAPSGGSALHEVKSVGAA HHHHHCCCEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC DTYWFADYLADLDFLLDHYAAGQAVDLVGHSMGGNVAMLYAGVRPARIRKLVNLEGFGLP HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCCC ASKPSQAPARYAKWMDELKSLHRGELDLKAYNDVDGVARRLMRTNPRLSSDKAHWLANHW CCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHC ARPDASGKWRILGDAAHKITSAHLYRLDEALEIYRQISAPTLSVEASDDSLATWWKGSYT CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEHHCCCCCH LAQYHERLKQIPQAQVAVVQDAGHMLHHDQPEQLARRIEDFLG HHHHHHHHHHCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA