| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787479
Identifier: 91787479
GI number: 91787479
Start: 1647506
End: 1648168
Strand: Reverse
Name: 91787479
Synonym: Bpro_1595
Alternate gene names: NA
Gene position: 1648168-1647506 (Counterclockwise)
Preceding gene: 91787480
Following gene: 91787475
Centisome position: 31.69
GC content: 63.8
Gene sequence:
>663_bases TTGCCCTCCTCGCGTATTTCCGTTGTAGCAGGGTTGCTGACGGCGTTCACACTGCTGCACGGCGCGGCTTATGCCCAGTC GGTGGCGCTGGCCGGCATGATGGGCAGCAAGGCCCTGCTGGTGGTTGATGGCAGCACGCCAAAGTCTGTGGCGGCGGGTG AGACCCACCAGGGGGTCAAGGTCATTTCCACCTCAGGCGACCAGGCCGTCATTGAGCAATCCGGCAAACGCCACACCCTG CGGGTGGGTGACGCACCGGTGAGCACGGGCGGCAGCGGCGCCTCGGCGGGCCGGGGCACCCGCATCATCCTGACGGAAAG CGGAGGCGGCCACTTCATGACCGCCGGGCAGATCAATGGCCGCGCCGTGCAATTCATGGTTGATACCGGTGCCACCAGTA TTGCGATGAGCGTCGCCGATGCCGACCGTGCGGGCATCAACTACAAGAACGGGCAGCCGGTGCGCATCTCCACCGCCAAC GGCAACACGCAGGGCTTTCGCATCCAGCTCAACTCGGTACGCATCGGCGACGTGGAGGTGTACGACGTGGCGGCTGTGGT AACACCCGAACCCATGCCCTTCCTGCTGTTGGGCAACAGTTTTCTGACGCGCTTTCAGATGAGGCGGGAAAACAACCAGA TGACGCTGGACAAGCGGTACTAG
Upstream 100 bases:
>100_bases ATTAAACATGGCCCCCACGCTTGTCGCTTTGCGTACTGCGCTGCCCCTTTCACAAGAAAAGGGGGCTGTGCTTGCTTGGG GCGGCCCGGCGCGGCGCACT
Downstream 100 bases:
>100_bases ACCTGTCCACACACAACCCGCCGGCATTCACGCACCGGCGCAGTTGCGGTGCTATCGCGCCGTCTTGCCCGAGGAGCCCA GCTTGGACTCGGTGCCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MPSSRISVVAGLLTAFTLLHGAAYAQSVALAGMMGSKALLVVDGSTPKSVAAGETHQGVKVISTSGDQAVIEQSGKRHTL RVGDAPVSTGGSGASAGRGTRIILTESGGGHFMTAGQINGRAVQFMVDTGATSIAMSVADADRAGINYKNGQPVRISTAN GNTQGFRIQLNSVRIGDVEVYDVAAVVTPEPMPFLLLGNSFLTRFQMRRENNQMTLDKRY
Sequences:
>Translated_220_residues MPSSRISVVAGLLTAFTLLHGAAYAQSVALAGMMGSKALLVVDGSTPKSVAAGETHQGVKVISTSGDQAVIEQSGKRHTL RVGDAPVSTGGSGASAGRGTRIILTESGGGHFMTAGQINGRAVQFMVDTGATSIAMSVADADRAGINYKNGQPVRISTAN GNTQGFRIQLNSVRIGDVEVYDVAAVVTPEPMPFLLLGNSFLTRFQMRRENNQMTLDKRY >Mature_219_residues PSSRISVVAGLLTAFTLLHGAAYAQSVALAGMMGSKALLVVDGSTPKSVAAGETHQGVKVISTSGDQAVIEQSGKRHTLR VGDAPVSTGGSGASAGRGTRIILTESGGGHFMTAGQINGRAVQFMVDTGATSIAMSVADADRAGINYKNGQPVRISTANG NTQGFRIQLNSVRIGDVEVYDVAAVVTPEPMPFLLLGNSFLTRFQMRRENNQMTLDKRY
Specific function: Unknown
COG id: COG3577
COG function: function code R; Predicted aspartyl protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22956; Mature: 22825
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSRISVVAGLLTAFTLLHGAAYAQSVALAGMMGSKALLVVDGSTPKSVAAGETHQGVK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCCCCCCCEE VISTSGDQAVIEQSGKRHTLRVGDAPVSTGGSGASAGRGTRIILTESGGGHFMTAGQING EEECCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCC RAVQFMVDTGATSIAMSVADADRAGINYKNGQPVRISTANGNTQGFRIQLNSVRIGDVEV EEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCEEECCEEE YDVAAVVTPEPMPFLLLGNSFLTRFQMRRENNQMTLDKRY EEEEEEECCCCCEEEEECCHHHHHHHHHHCCCCEEEECCC >Mature Secondary Structure PSSRISVVAGLLTAFTLLHGAAYAQSVALAGMMGSKALLVVDGSTPKSVAAGETHQGVK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCCCCCCCEE VISTSGDQAVIEQSGKRHTLRVGDAPVSTGGSGASAGRGTRIILTESGGGHFMTAGQING EEECCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCC RAVQFMVDTGATSIAMSVADADRAGINYKNGQPVRISTANGNTQGFRIQLNSVRIGDVEV EEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCEEECCEEE YDVAAVVTPEPMPFLLLGNSFLTRFQMRRENNQMTLDKRY EEEEEEECCCCCEEEEECCHHHHHHHHHHCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA