Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787479

Identifier: 91787479

GI number: 91787479

Start: 1647506

End: 1648168

Strand: Reverse

Name: 91787479

Synonym: Bpro_1595

Alternate gene names: NA

Gene position: 1648168-1647506 (Counterclockwise)

Preceding gene: 91787480

Following gene: 91787475

Centisome position: 31.69

GC content: 63.8

Gene sequence:

>663_bases
TTGCCCTCCTCGCGTATTTCCGTTGTAGCAGGGTTGCTGACGGCGTTCACACTGCTGCACGGCGCGGCTTATGCCCAGTC
GGTGGCGCTGGCCGGCATGATGGGCAGCAAGGCCCTGCTGGTGGTTGATGGCAGCACGCCAAAGTCTGTGGCGGCGGGTG
AGACCCACCAGGGGGTCAAGGTCATTTCCACCTCAGGCGACCAGGCCGTCATTGAGCAATCCGGCAAACGCCACACCCTG
CGGGTGGGTGACGCACCGGTGAGCACGGGCGGCAGCGGCGCCTCGGCGGGCCGGGGCACCCGCATCATCCTGACGGAAAG
CGGAGGCGGCCACTTCATGACCGCCGGGCAGATCAATGGCCGCGCCGTGCAATTCATGGTTGATACCGGTGCCACCAGTA
TTGCGATGAGCGTCGCCGATGCCGACCGTGCGGGCATCAACTACAAGAACGGGCAGCCGGTGCGCATCTCCACCGCCAAC
GGCAACACGCAGGGCTTTCGCATCCAGCTCAACTCGGTACGCATCGGCGACGTGGAGGTGTACGACGTGGCGGCTGTGGT
AACACCCGAACCCATGCCCTTCCTGCTGTTGGGCAACAGTTTTCTGACGCGCTTTCAGATGAGGCGGGAAAACAACCAGA
TGACGCTGGACAAGCGGTACTAG

Upstream 100 bases:

>100_bases
ATTAAACATGGCCCCCACGCTTGTCGCTTTGCGTACTGCGCTGCCCCTTTCACAAGAAAAGGGGGCTGTGCTTGCTTGGG
GCGGCCCGGCGCGGCGCACT

Downstream 100 bases:

>100_bases
ACCTGTCCACACACAACCCGCCGGCATTCACGCACCGGCGCAGTTGCGGTGCTATCGCGCCGTCTTGCCCGAGGAGCCCA
GCTTGGACTCGGTGCCCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MPSSRISVVAGLLTAFTLLHGAAYAQSVALAGMMGSKALLVVDGSTPKSVAAGETHQGVKVISTSGDQAVIEQSGKRHTL
RVGDAPVSTGGSGASAGRGTRIILTESGGGHFMTAGQINGRAVQFMVDTGATSIAMSVADADRAGINYKNGQPVRISTAN
GNTQGFRIQLNSVRIGDVEVYDVAAVVTPEPMPFLLLGNSFLTRFQMRRENNQMTLDKRY

Sequences:

>Translated_220_residues
MPSSRISVVAGLLTAFTLLHGAAYAQSVALAGMMGSKALLVVDGSTPKSVAAGETHQGVKVISTSGDQAVIEQSGKRHTL
RVGDAPVSTGGSGASAGRGTRIILTESGGGHFMTAGQINGRAVQFMVDTGATSIAMSVADADRAGINYKNGQPVRISTAN
GNTQGFRIQLNSVRIGDVEVYDVAAVVTPEPMPFLLLGNSFLTRFQMRRENNQMTLDKRY
>Mature_219_residues
PSSRISVVAGLLTAFTLLHGAAYAQSVALAGMMGSKALLVVDGSTPKSVAAGETHQGVKVISTSGDQAVIEQSGKRHTLR
VGDAPVSTGGSGASAGRGTRIILTESGGGHFMTAGQINGRAVQFMVDTGATSIAMSVADADRAGINYKNGQPVRISTANG
NTQGFRIQLNSVRIGDVEVYDVAAVVTPEPMPFLLLGNSFLTRFQMRRENNQMTLDKRY

Specific function: Unknown

COG id: COG3577

COG function: function code R; Predicted aspartyl protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22956; Mature: 22825

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSSRISVVAGLLTAFTLLHGAAYAQSVALAGMMGSKALLVVDGSTPKSVAAGETHQGVK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCCCCCCCEE
VISTSGDQAVIEQSGKRHTLRVGDAPVSTGGSGASAGRGTRIILTESGGGHFMTAGQING
EEECCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCC
RAVQFMVDTGATSIAMSVADADRAGINYKNGQPVRISTANGNTQGFRIQLNSVRIGDVEV
EEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCEEECCEEE
YDVAAVVTPEPMPFLLLGNSFLTRFQMRRENNQMTLDKRY
EEEEEEECCCCCEEEEECCHHHHHHHHHHCCCCEEEECCC
>Mature Secondary Structure 
PSSRISVVAGLLTAFTLLHGAAYAQSVALAGMMGSKALLVVDGSTPKSVAAGETHQGVK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCCCCCCCEE
VISTSGDQAVIEQSGKRHTLRVGDAPVSTGGSGASAGRGTRIILTESGGGHFMTAGQING
EEECCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCC
RAVQFMVDTGATSIAMSVADADRAGINYKNGQPVRISTANGNTQGFRIQLNSVRIGDVEV
EEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCEEECCEEE
YDVAAVVTPEPMPFLLLGNSFLTRFQMRRENNQMTLDKRY
EEEEEEECCCCCEEEEECCHHHHHHHHHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA