| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787433
Identifier: 91787433
GI number: 91787433
Start: 1594834
End: 1595247
Strand: Reverse
Name: 91787433
Synonym: Bpro_1543
Alternate gene names: NA
Gene position: 1595247-1594834 (Counterclockwise)
Preceding gene: 91787434
Following gene: 91787432
Centisome position: 30.68
GC content: 60.87
Gene sequence:
>414_bases ATGAAAAACATCTACAAGATCATCCCGCTGCTGGCCGTCTGCCTGTTTACCGGTTGCGCGACGCGGCCGAGTGCTCAGGA AATGAATTACCTGGCATCTGCTCTGACGAAGGTCTCCGCTGCGGTGGACGCCACCGTCCGCCATCGCCGTCCGGCCGACG GATTGCCAGAGGCTGAGTTGCTGCAACTCTCAACAGCCCATGACCCAGCGCTGATGAAGTCTTTCGACGGTCTGACGGTG CGCGTGCTGCGCGATGGCCGTGACTCGGCTGTCTTGGTGTGTGAGGCACGGGGCGGTAAGGCCTTGCTGGAGGACGCAGG TTGCACCGCAAAGCTGGACCAACACCGCTGGAACAGCGGAGGCGTTGACCGCTGCGAGTTCACAGTCGACGTCAAAAAAG TCTGCGCACGGTAA
Upstream 100 bases:
>100_bases TTGAGGGCCGATCGGATGCTTTGGACACGCTTGAGGACTGGAACCTCGACACCGGCCGCAGTGTGCAAACAGGAAAGCTC GTTTTTTGGAGGGAACCGGC
Downstream 100 bases:
>100_bases CTTGATCAAAAAGCGGAAAAGAAAATGCCTAAAAACATCATCATCTTCTCGGACGGCACCGGCCAAGCTGGCGGATTGAA GCCAGACCAGAATCTGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MKNIYKIIPLLAVCLFTGCATRPSAQEMNYLASALTKVSAAVDATVRHRRPADGLPEAELLQLSTAHDPALMKSFDGLTV RVLRDGRDSAVLVCEARGGKALLEDAGCTAKLDQHRWNSGGVDRCEFTVDVKKVCAR
Sequences:
>Translated_137_residues MKNIYKIIPLLAVCLFTGCATRPSAQEMNYLASALTKVSAAVDATVRHRRPADGLPEAELLQLSTAHDPALMKSFDGLTV RVLRDGRDSAVLVCEARGGKALLEDAGCTAKLDQHRWNSGGVDRCEFTVDVKKVCAR >Mature_137_residues MKNIYKIIPLLAVCLFTGCATRPSAQEMNYLASALTKVSAAVDATVRHRRPADGLPEAELLQLSTAHDPALMKSFDGLTV RVLRDGRDSAVLVCEARGGKALLEDAGCTAKLDQHRWNSGGVDRCEFTVDVKKVCAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14828; Mature: 14828
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIYKIIPLLAVCLFTGCATRPSAQEMNYLASALTKVSAAVDATVRHRRPADGLPEAEL CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LQLSTAHDPALMKSFDGLTVRVLRDGRDSAVLVCEARGGKALLEDAGCTAKLDQHRWNSG HEECCCCCHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCEEHHCCCCCCCHHHCCCCCC GVDRCEFTVDVKKVCAR CCCEEEEEEEHHHHHCC >Mature Secondary Structure MKNIYKIIPLLAVCLFTGCATRPSAQEMNYLASALTKVSAAVDATVRHRRPADGLPEAEL CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LQLSTAHDPALMKSFDGLTVRVLRDGRDSAVLVCEARGGKALLEDAGCTAKLDQHRWNSG HEECCCCCHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCEEHHCCCCCCCHHHCCCCCC GVDRCEFTVDVKKVCAR CCCEEEEEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA