| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787432
Identifier: 91787432
GI number: 91787432
Start: 1593385
End: 1594809
Strand: Reverse
Name: 91787432
Synonym: Bpro_1542
Alternate gene names: NA
Gene position: 1594809-1593385 (Counterclockwise)
Preceding gene: 91787433
Following gene: 91787431
Centisome position: 30.67
GC content: 59.3
Gene sequence:
>1425_bases ATGCCTAAAAACATCATCATCTTCTCGGACGGCACCGGCCAAGCTGGCGGATTGAAGCCAGACCAGAATCTGAGCAACAT ATACAAACTGTTCCGCGCCGCCCGTCCCGGGCCGGAAAGCCCAATCAATCCGGCTGAGCAAATCGCGTTTTATGACGCGG GTCTGGGTACGGAGACTGATGAAGGAAAGATTCCTTTCAGGCCGGTGCAGAAGTTTCGCAAAATCTGGAGTGCCGCCACA GGCACGGGTATCAGCCGCAACATCGCTGACTGCTACGAGGCGATCCTCAAGCATTACGAGCCGGGCGACCGGGTTTTTCT CTTCGGTTTTAGCCGTGGCGCCTATACCGCCAGGTGCGTTGGTGGCGTCATGTCGCTGTGCGGAGTGCCCACCCACGCCG CCGACGGCAGTCCTCTGCCGCGCTTTGGTAAAGGCCTTCGCCGAATTGCCGATGAAGCCGTCTCGCAGGTGTACGAGCAT GGTTCGGGCAGCAATAAGCCTGAACGTAAGGAAGAGCGGCTGGAGAAGGCTCGACGCTTTCGGGAGAAATACGGCAGCCA GAATGATGCCGGCCAATCGAACGTGGTGCCGTACTTTATCGGTGTCTTCGACACAGTGGCGGCGCTGGGCGCTCCCGGAC CGCGTCGCCTCCTGATGGGCTTGAGTCTCGTGGCGTTTGTCGGTCTGACGACCGCAGCGGCCGCAGGAATTGTCTCGCTC ATGCCTTGGTTTAGCTTCTGGCCTGCATTCTCGGCGTTCACCGCCGCCATCGCTCTCGCGTTGTTGGCTGGATACGTGAA CACCAGCGTCAAGACCATTCGCGACTTTCCCAAGAAGGGCAACTTCAGCTGGCACATAGCCGCTTGGCGGTTCCGCTTCT ATGACAACTCGCTCAACACACGCGTACGCTATGCCCGTCATGCGCTGGCTATTGACGAGACGCGCAAGGATTTCGCTCGT GTACCGTGGGCCACGCTCGGGGAATGGCCTGCGCGGCCGGGCGAGCCGGAGTGGCTACAGCAAGTCTGGTTTGCAGGTAA CCATTCGGACATTGGCGGCAGCTACGCAGAAGATGAATCGCGTCTGTCGGATATCACCTTGCAATGGATGGCTGAACAAG CAACCGGTCTGCCGCACCCGCTGCAGATTGACAAGGCCAAGCTGCACATGTTTCCGGACGCCGGCGGCATGCAGCATTGC GAGGTCATAAGCATGAACGAGGCTCACGCGTGGGCTGGCCGCTTCCTTGATGAAGAAGCACGTGAAATCAATGTCCAGGC GGTACTGCATCCGACTGTGATGACACGTCTGGCGCTGCCCGGCGTCCTTCACTACGGCCTGCGCCGTGAATACCGCCCGG GCAATCTGGCCGGACACACCAAGTTGGGCCAGTTCTTCAATAAGAAGCCCGAAGCTTCGGCTTGA
Upstream 100 bases:
>100_bases CCAACACCGCTGGAACAGCGGAGGCGTTGACCGCTGCGAGTTCACAGTCGACGTCAAAAAAGTCTGCGCACGGTAACTTG ATCAAAAAGCGGAAAAGAAA
Downstream 100 bases:
>100_bases GGCCGTCGGTCAACGGAATTGCGAAAGGTAGTCACTATGCACCGCGATACTCTTCCTCTGCCGTTGAAGCGGCAACTCTC CCGCGTTTCATCTCCGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MPKNIIIFSDGTGQAGGLKPDQNLSNIYKLFRAARPGPESPINPAEQIAFYDAGLGTETDEGKIPFRPVQKFRKIWSAAT GTGISRNIADCYEAILKHYEPGDRVFLFGFSRGAYTARCVGGVMSLCGVPTHAADGSPLPRFGKGLRRIADEAVSQVYEH GSGSNKPERKEERLEKARRFREKYGSQNDAGQSNVVPYFIGVFDTVAALGAPGPRRLLMGLSLVAFVGLTTAAAAGIVSL MPWFSFWPAFSAFTAAIALALLAGYVNTSVKTIRDFPKKGNFSWHIAAWRFRFYDNSLNTRVRYARHALAIDETRKDFAR VPWATLGEWPARPGEPEWLQQVWFAGNHSDIGGSYAEDESRLSDITLQWMAEQATGLPHPLQIDKAKLHMFPDAGGMQHC EVISMNEAHAWAGRFLDEEAREINVQAVLHPTVMTRLALPGVLHYGLRREYRPGNLAGHTKLGQFFNKKPEASA
Sequences:
>Translated_474_residues MPKNIIIFSDGTGQAGGLKPDQNLSNIYKLFRAARPGPESPINPAEQIAFYDAGLGTETDEGKIPFRPVQKFRKIWSAAT GTGISRNIADCYEAILKHYEPGDRVFLFGFSRGAYTARCVGGVMSLCGVPTHAADGSPLPRFGKGLRRIADEAVSQVYEH GSGSNKPERKEERLEKARRFREKYGSQNDAGQSNVVPYFIGVFDTVAALGAPGPRRLLMGLSLVAFVGLTTAAAAGIVSL MPWFSFWPAFSAFTAAIALALLAGYVNTSVKTIRDFPKKGNFSWHIAAWRFRFYDNSLNTRVRYARHALAIDETRKDFAR VPWATLGEWPARPGEPEWLQQVWFAGNHSDIGGSYAEDESRLSDITLQWMAEQATGLPHPLQIDKAKLHMFPDAGGMQHC EVISMNEAHAWAGRFLDEEAREINVQAVLHPTVMTRLALPGVLHYGLRREYRPGNLAGHTKLGQFFNKKPEASA >Mature_473_residues PKNIIIFSDGTGQAGGLKPDQNLSNIYKLFRAARPGPESPINPAEQIAFYDAGLGTETDEGKIPFRPVQKFRKIWSAATG TGISRNIADCYEAILKHYEPGDRVFLFGFSRGAYTARCVGGVMSLCGVPTHAADGSPLPRFGKGLRRIADEAVSQVYEHG SGSNKPERKEERLEKARRFREKYGSQNDAGQSNVVPYFIGVFDTVAALGAPGPRRLLMGLSLVAFVGLTTAAAAGIVSLM PWFSFWPAFSAFTAAIALALLAGYVNTSVKTIRDFPKKGNFSWHIAAWRFRFYDNSLNTRVRYARHALAIDETRKDFARV PWATLGEWPARPGEPEWLQQVWFAGNHSDIGGSYAEDESRLSDITLQWMAEQATGLPHPLQIDKAKLHMFPDAGGMQHCE VISMNEAHAWAGRFLDEEAREINVQAVLHPTVMTRLALPGVLHYGLRREYRPGNLAGHTKLGQFFNKKPEASA
Specific function: Unknown
COG id: COG3673
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6320812, Length=211, Percent_Identity=27.4881516587678, Blast_Score=86, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52370; Mature: 52239
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKNIIIFSDGTGQAGGLKPDQNLSNIYKLFRAARPGPESPINPAEQIAFYDAGLGTETD CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHEEHCCCCCCCCC EGKIPFRPVQKFRKIWSAATGTGISRNIADCYEAILKHYEPGDRVFLFGFSRGAYTARCV CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHH GGVMSLCGVPTHAADGSPLPRFGKGLRRIADEAVSQVYEHGSGSNKPERKEERLEKARRF HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH REKYGSQNDAGQSNVVPYFIGVFDTVAALGAPGPRRLLMGLSLVAFVGLTTAAAAGIVSL HHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MPWFSFWPAFSAFTAAIALALLAGYVNTSVKTIRDFPKKGNFSWHIAAWRFRFYDNSLNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCHHH RVRYARHALAIDETRKDFARVPWATLGEWPARPGEPEWLQQVWFAGNHSDIGGSYAEDES HHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHH RLSDITLQWMAEQATGLPHPLQIDKAKLHMFPDAGGMQHCEVISMNEAHAWAGRFLDEEA HHHHHHHHHHHHHHCCCCCCCEECCHHEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHH REINVQAVLHPTVMTRLALPGVLHYGLRREYRPGNLAGHTKLGQFFNKKPEASA HHCCHHEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure PKNIIIFSDGTGQAGGLKPDQNLSNIYKLFRAARPGPESPINPAEQIAFYDAGLGTETD CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHEEHCCCCCCCCC EGKIPFRPVQKFRKIWSAATGTGISRNIADCYEAILKHYEPGDRVFLFGFSRGAYTARCV CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHH GGVMSLCGVPTHAADGSPLPRFGKGLRRIADEAVSQVYEHGSGSNKPERKEERLEKARRF HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH REKYGSQNDAGQSNVVPYFIGVFDTVAALGAPGPRRLLMGLSLVAFVGLTTAAAAGIVSL HHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MPWFSFWPAFSAFTAAIALALLAGYVNTSVKTIRDFPKKGNFSWHIAAWRFRFYDNSLNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCHHH RVRYARHALAIDETRKDFARVPWATLGEWPARPGEPEWLQQVWFAGNHSDIGGSYAEDES HHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHH RLSDITLQWMAEQATGLPHPLQIDKAKLHMFPDAGGMQHCEVISMNEAHAWAGRFLDEEA HHHHHHHHHHHHHHCCCCCCCEECCHHEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHH REINVQAVLHPTVMTRLALPGVLHYGLRREYRPGNLAGHTKLGQFFNKKPEASA HHCCHHEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA