| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787434
Identifier: 91787434
GI number: 91787434
Start: 1595244
End: 1596173
Strand: Reverse
Name: 91787434
Synonym: Bpro_1544
Alternate gene names: NA
Gene position: 1596173-1595244 (Counterclockwise)
Preceding gene: 91787437
Following gene: 91787433
Centisome position: 30.69
GC content: 59.03
Gene sequence:
>930_bases ATGCCCGGCGCCTATGCTCATATCGCGGTTGTCAATGACGCCCAGAAGCGCGCCGACTCGGCAGGGTTGCGCGAAGACAC GCTGGTCAGTCTTGGGCTTTACCTGAAGTATGCGGAGTTAGGTGCCGTCAGCCCGGACTACCCCTACCTCACCCTCAAAC AAGGCCAGAAGAAGTGGGCGGACGCCATGCACTACACCCGCAATGCTTCGCTGCTGCGGGTCGGAGTGGCAGCCGTGGCG AAACTACCACCAGATCTTCGGCCTAAAGCCACAGCTTGGCTACTGGGCTTTGCGGCACACATGGTCACTGATATGACCAT CCATCCCGTCGTCGAGCGCCGAGTTGGCCCTTACAAGGGGAACGAGGGTGAGCATCGGCGCTGCGAGATGCACCAGGATG CTTTCATTTTCCCCCGGGTGATGAATGTTGGCGATACCGGCTTGTCTGAACATCTGGCGACAGGCATCGCCGCGTGCCAC GCCGCAGATGACGAAGACGAGATTGACCCCACTGTGGGCCAAGTGTGGCTGGCGATGCTGGCTGCCGTTTATCCGGAAGA TCTGACAGGGGGGCCACCATTGCCGGGTGCTTGGCACTGCGGTTTTCGAGATATTTTGGCGGCAATGGCCGGTGCTAATC ACTTATTTCCCTTTGCGCGCCATGTCAGCGCAGATCTGAATATCGCCTATCCCACGGAAAGTTCAATCGACACGAGCTAC ACCCTGCAGCTGCGAACACCCGAAGGCCCCATGGACTACGAGGCAATCTATGGACGCGCCAGGAGCAATGTCCTTGCGGT CTGGAAAGGCCTCGACGACGCGCTGATTGAGGGCCGATCGGATGCTTTGGACACGCTTGAGGACTGGAACCTCGACACCG GCCGCAGTGTGCAAACAGGAAAGCTCGTTTTTTGGAGGGAACCGGCATGA
Upstream 100 bases:
>100_bases GGGGCATGGTCTGCCAAGTGTAAAGCGGTCATTTTCTGGTCGGTGTGGTGTCACCGGCGGTGACCCACCGTCCGACCTCA GATCTACTTAAGGAGTTCCC
Downstream 100 bases:
>100_bases AAAACATCTACAAGATCATCCCGCTGCTGGCCGTCTGCCTGTTTACCGGTTGCGCGACGCGGCCGAGTGCTCAGGAAATG AATTACCTGGCATCTGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MPGAYAHIAVVNDAQKRADSAGLREDTLVSLGLYLKYAELGAVSPDYPYLTLKQGQKKWADAMHYTRNASLLRVGVAAVA KLPPDLRPKATAWLLGFAAHMVTDMTIHPVVERRVGPYKGNEGEHRRCEMHQDAFIFPRVMNVGDTGLSEHLATGIAACH AADDEDEIDPTVGQVWLAMLAAVYPEDLTGGPPLPGAWHCGFRDILAAMAGANHLFPFARHVSADLNIAYPTESSIDTSY TLQLRTPEGPMDYEAIYGRARSNVLAVWKGLDDALIEGRSDALDTLEDWNLDTGRSVQTGKLVFWREPA
Sequences:
>Translated_309_residues MPGAYAHIAVVNDAQKRADSAGLREDTLVSLGLYLKYAELGAVSPDYPYLTLKQGQKKWADAMHYTRNASLLRVGVAAVA KLPPDLRPKATAWLLGFAAHMVTDMTIHPVVERRVGPYKGNEGEHRRCEMHQDAFIFPRVMNVGDTGLSEHLATGIAACH AADDEDEIDPTVGQVWLAMLAAVYPEDLTGGPPLPGAWHCGFRDILAAMAGANHLFPFARHVSADLNIAYPTESSIDTSY TLQLRTPEGPMDYEAIYGRARSNVLAVWKGLDDALIEGRSDALDTLEDWNLDTGRSVQTGKLVFWREPA >Mature_308_residues PGAYAHIAVVNDAQKRADSAGLREDTLVSLGLYLKYAELGAVSPDYPYLTLKQGQKKWADAMHYTRNASLLRVGVAAVAK LPPDLRPKATAWLLGFAAHMVTDMTIHPVVERRVGPYKGNEGEHRRCEMHQDAFIFPRVMNVGDTGLSEHLATGIAACHA ADDEDEIDPTVGQVWLAMLAAVYPEDLTGGPPLPGAWHCGFRDILAAMAGANHLFPFARHVSADLNIAYPTESSIDTSYT LQLRTPEGPMDYEAIYGRARSNVLAVWKGLDDALIEGRSDALDTLEDWNLDTGRSVQTGKLVFWREPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33824; Mature: 33692
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGAYAHIAVVNDAQKRADSAGLREDTLVSLGLYLKYAELGAVSPDYPYLTLKQGQKKWA CCCCEEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHH DAMHYTRNASLLRVGVAAVAKLPPDLRPKATAWLLGFAAHMVTDMTIHPVVERRVGPYKG HHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC NEGEHRRCEMHQDAFIFPRVMNVGDTGLSEHLATGIAACHAADDEDEIDPTVGQVWLAML CCCCCHHHHHCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH AAVYPEDLTGGPPLPGAWHCGFRDILAAMAGANHLFPFARHVSADLNIAYPTESSIDTSY HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCEEECCCCCCCCCEE TLQLRTPEGPMDYEAIYGRARSNVLAVWKGLDDALIEGRSDALDTLEDWNLDTGRSVQTG EEEEECCCCCCCHHHHHHHHHCCEEEEECCCHHHHHCCCCHHHHHHHHCCCCCCCCEECC KLVFWREPA EEEEEECCC >Mature Secondary Structure PGAYAHIAVVNDAQKRADSAGLREDTLVSLGLYLKYAELGAVSPDYPYLTLKQGQKKWA CCCEEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHH DAMHYTRNASLLRVGVAAVAKLPPDLRPKATAWLLGFAAHMVTDMTIHPVVERRVGPYKG HHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC NEGEHRRCEMHQDAFIFPRVMNVGDTGLSEHLATGIAACHAADDEDEIDPTVGQVWLAML CCCCCHHHHHCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH AAVYPEDLTGGPPLPGAWHCGFRDILAAMAGANHLFPFARHVSADLNIAYPTESSIDTSY HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCEEECCCCCCCCCEE TLQLRTPEGPMDYEAIYGRARSNVLAVWKGLDDALIEGRSDALDTLEDWNLDTGRSVQTG EEEEECCCCCCCHHHHHHHHHCCEEEEECCCHHHHHCCCCHHHHHHHHCCCCCCCCEECC KLVFWREPA EEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA