| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yufQ [H]
Identifier: 91787379
GI number: 91787379
Start: 1539879
End: 1540799
Strand: Direct
Name: yufQ [H]
Synonym: Bpro_1485
Alternate gene names: 91787379
Gene position: 1539879-1540799 (Clockwise)
Preceding gene: 91787378
Following gene: 91787380
Centisome position: 29.61
GC content: 65.15
Gene sequence:
>921_bases ATGGAATCCTATGCACTGCTGTTTGCCGCCACGCTCAGCGCGGGCACGGTTCTGGCCATTGCCGGGCTGGGCCTGCTGAT CAACGAAAAGGCCGGCATCGTCAACCTGGGTGCCGAAGGCATGCTCTTGTGCGCGGCGATTGCCGGCTTTGCCACTGTGG TGCACACCGGCAATACCTGGCTGGGTTTTGCCGCGGGCATGGCGGCCGGGGCCGTGCTGGCGGCCATCTTTGGCGTGCTG GTGATCTGGCTCAATACCAACCAGTACGCCACCGGGCTGGCGCTCAGTCTTTTCGGCGTGGGCTTTTCGGCTTTTGCCGG CATCCCCTATGTGCAGGCCAAGTTGCCCGAGCGCACACCGCTGGAGCTTCCGGTGCTCAGCGACCTTCCGTTGCTGGGGC CGGCGCTGTTTCGCCAGCACCCCCTGGTCTACCTGACCATTGCGCTGGCGTTTGGCTTGATCTGGTTTCTCTACCGTACA CGCGCCGGCCTGGTGCTCAGGGCGGTGGGCGAATCGCCCGAGTCGGCCCATGCGCTGGGCTACCCGGTGCGGCGCATCCG CCTGGCGGCGGTGGTTGCGGGCGGTGCCCTGTGCGGCCTCGCCGGGGCCTACATTTCCACGGTCTACACCCCGTTGTGGG TTGAAGGCATGGTGGCCGGCCGGGGCTGGATCGCGCTGGCGCTGACCACCTTTGCCACCTGGCGCCCGGCCCGGGTTTTG CTTGGGGCTTACCTGTTTGGCGGTGTGACCATGCTGCAGTTCCACCTGCAGGGCGCGGGGGTGAATGTTCCCAGCCAGTT CCTGAGCATGTTGCCTTACCTGGCTACCATCGTGGTGCTGGCGCTGATTTCACGCAATCCCCAGTGGATACGCGTGAACA TGCCGGGCTCCATTGGCAAACCGTTTTACCCTGGGTCCTGA
Upstream 100 bases:
>100_bases CGGCTGACACGCTGATCGCCTACCGCATCAAATTCGTCAGGGCTGCGCGCCAGGCGCCCATCCCCGCCATCCCGCAAACA ACCCCCCGGGAGGCGCACTG
Downstream 100 bases:
>100_bases TTTTTCGGACTCATTTCCGGGCTCATAATGGCCTTTTTTTGCAAACCCGTCGCTACAGGAGACGACATGACTGACCTGAA AAAACGTTCCTTGCTCCAAC
Product: inner-membrane translocator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MESYALLFAATLSAGTVLAIAGLGLLINEKAGIVNLGAEGMLLCAAIAGFATVVHTGNTWLGFAAGMAAGAVLAAIFGVL VIWLNTNQYATGLALSLFGVGFSAFAGIPYVQAKLPERTPLELPVLSDLPLLGPALFRQHPLVYLTIALAFGLIWFLYRT RAGLVLRAVGESPESAHALGYPVRRIRLAAVVAGGALCGLAGAYISTVYTPLWVEGMVAGRGWIALALTTFATWRPARVL LGAYLFGGVTMLQFHLQGAGVNVPSQFLSMLPYLATIVVLALISRNPQWIRVNMPGSIGKPFYPGS
Sequences:
>Translated_306_residues MESYALLFAATLSAGTVLAIAGLGLLINEKAGIVNLGAEGMLLCAAIAGFATVVHTGNTWLGFAAGMAAGAVLAAIFGVL VIWLNTNQYATGLALSLFGVGFSAFAGIPYVQAKLPERTPLELPVLSDLPLLGPALFRQHPLVYLTIALAFGLIWFLYRT RAGLVLRAVGESPESAHALGYPVRRIRLAAVVAGGALCGLAGAYISTVYTPLWVEGMVAGRGWIALALTTFATWRPARVL LGAYLFGGVTMLQFHLQGAGVNVPSQFLSMLPYLATIVVLALISRNPQWIRVNMPGSIGKPFYPGS >Mature_306_residues MESYALLFAATLSAGTVLAIAGLGLLINEKAGIVNLGAEGMLLCAAIAGFATVVHTGNTWLGFAAGMAAGAVLAAIFGVL VIWLNTNQYATGLALSLFGVGFSAFAGIPYVQAKLPERTPLELPVLSDLPLLGPALFRQHPLVYLTIALAFGLIWFLYRT RAGLVLRAVGESPESAHALGYPVRRIRLAAVVAGGALCGLAGAYISTVYTPLWVEGMVAGRGWIALALTTFATWRPARVL LGAYLFGGVTMLQFHLQGAGVNVPSQFLSMLPYLATIVVLALISRNPQWIRVNMPGSIGKPFYPGS
Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]
COG id: COG1079
COG function: function code R; Uncharacterized ABC-type transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 32129; Mature: 32129
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESYALLFAATLSAGTVLAIAGLGLLINEKAGIVNLGAEGMLLCAAIAGFATVVHTGNTW CCCHHHHHHHHHCCCHHHHHHHCCCEEECCCCEEEECCCHHHHHHHHHHHHHHHCCCCCH LGFAAGMAAGAVLAAIFGVLVIWLNTNQYATGLALSLFGVGFSAFAGIPYVQAKLPERTP HHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCHHHHCCCCHHHHCCCCCCC LELPVLSDLPLLGPALFRQHPLVYLTIALAFGLIWFLYRTRAGLVLRAVGESPESAHALG CCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHC YPVRRIRLAAVVAGGALCGLAGAYISTVYTPLWVEGMVAGRGWIALALTTFATWRPARVL CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCHHHHH LGAYLFGGVTMLQFHLQGAGVNVPSQFLSMLPYLATIVVLALISRNPQWIRVNMPGSIGK HHHHHHHHHHEEHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC PFYPGS CCCCCC >Mature Secondary Structure MESYALLFAATLSAGTVLAIAGLGLLINEKAGIVNLGAEGMLLCAAIAGFATVVHTGNTW CCCHHHHHHHHHCCCHHHHHHHCCCEEECCCCEEEECCCHHHHHHHHHHHHHHHCCCCCH LGFAAGMAAGAVLAAIFGVLVIWLNTNQYATGLALSLFGVGFSAFAGIPYVQAKLPERTP HHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCHHHHCCCCHHHHCCCCCCC LELPVLSDLPLLGPALFRQHPLVYLTIALAFGLIWFLYRTRAGLVLRAVGESPESAHALG CCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHC YPVRRIRLAAVVAGGALCGLAGAYISTVYTPLWVEGMVAGRGWIALALTTFATWRPARVL CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCHHHHH LGAYLFGGVTMLQFHLQGAGVNVPSQFLSMLPYLATIVVLALISRNPQWIRVNMPGSIGK HHHHHHHHHHEEHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC PFYPGS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]