Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yufQ [H]

Identifier: 91787379

GI number: 91787379

Start: 1539879

End: 1540799

Strand: Direct

Name: yufQ [H]

Synonym: Bpro_1485

Alternate gene names: 91787379

Gene position: 1539879-1540799 (Clockwise)

Preceding gene: 91787378

Following gene: 91787380

Centisome position: 29.61

GC content: 65.15

Gene sequence:

>921_bases
ATGGAATCCTATGCACTGCTGTTTGCCGCCACGCTCAGCGCGGGCACGGTTCTGGCCATTGCCGGGCTGGGCCTGCTGAT
CAACGAAAAGGCCGGCATCGTCAACCTGGGTGCCGAAGGCATGCTCTTGTGCGCGGCGATTGCCGGCTTTGCCACTGTGG
TGCACACCGGCAATACCTGGCTGGGTTTTGCCGCGGGCATGGCGGCCGGGGCCGTGCTGGCGGCCATCTTTGGCGTGCTG
GTGATCTGGCTCAATACCAACCAGTACGCCACCGGGCTGGCGCTCAGTCTTTTCGGCGTGGGCTTTTCGGCTTTTGCCGG
CATCCCCTATGTGCAGGCCAAGTTGCCCGAGCGCACACCGCTGGAGCTTCCGGTGCTCAGCGACCTTCCGTTGCTGGGGC
CGGCGCTGTTTCGCCAGCACCCCCTGGTCTACCTGACCATTGCGCTGGCGTTTGGCTTGATCTGGTTTCTCTACCGTACA
CGCGCCGGCCTGGTGCTCAGGGCGGTGGGCGAATCGCCCGAGTCGGCCCATGCGCTGGGCTACCCGGTGCGGCGCATCCG
CCTGGCGGCGGTGGTTGCGGGCGGTGCCCTGTGCGGCCTCGCCGGGGCCTACATTTCCACGGTCTACACCCCGTTGTGGG
TTGAAGGCATGGTGGCCGGCCGGGGCTGGATCGCGCTGGCGCTGACCACCTTTGCCACCTGGCGCCCGGCCCGGGTTTTG
CTTGGGGCTTACCTGTTTGGCGGTGTGACCATGCTGCAGTTCCACCTGCAGGGCGCGGGGGTGAATGTTCCCAGCCAGTT
CCTGAGCATGTTGCCTTACCTGGCTACCATCGTGGTGCTGGCGCTGATTTCACGCAATCCCCAGTGGATACGCGTGAACA
TGCCGGGCTCCATTGGCAAACCGTTTTACCCTGGGTCCTGA

Upstream 100 bases:

>100_bases
CGGCTGACACGCTGATCGCCTACCGCATCAAATTCGTCAGGGCTGCGCGCCAGGCGCCCATCCCCGCCATCCCGCAAACA
ACCCCCCGGGAGGCGCACTG

Downstream 100 bases:

>100_bases
TTTTTCGGACTCATTTCCGGGCTCATAATGGCCTTTTTTTGCAAACCCGTCGCTACAGGAGACGACATGACTGACCTGAA
AAAACGTTCCTTGCTCCAAC

Product: inner-membrane translocator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MESYALLFAATLSAGTVLAIAGLGLLINEKAGIVNLGAEGMLLCAAIAGFATVVHTGNTWLGFAAGMAAGAVLAAIFGVL
VIWLNTNQYATGLALSLFGVGFSAFAGIPYVQAKLPERTPLELPVLSDLPLLGPALFRQHPLVYLTIALAFGLIWFLYRT
RAGLVLRAVGESPESAHALGYPVRRIRLAAVVAGGALCGLAGAYISTVYTPLWVEGMVAGRGWIALALTTFATWRPARVL
LGAYLFGGVTMLQFHLQGAGVNVPSQFLSMLPYLATIVVLALISRNPQWIRVNMPGSIGKPFYPGS

Sequences:

>Translated_306_residues
MESYALLFAATLSAGTVLAIAGLGLLINEKAGIVNLGAEGMLLCAAIAGFATVVHTGNTWLGFAAGMAAGAVLAAIFGVL
VIWLNTNQYATGLALSLFGVGFSAFAGIPYVQAKLPERTPLELPVLSDLPLLGPALFRQHPLVYLTIALAFGLIWFLYRT
RAGLVLRAVGESPESAHALGYPVRRIRLAAVVAGGALCGLAGAYISTVYTPLWVEGMVAGRGWIALALTTFATWRPARVL
LGAYLFGGVTMLQFHLQGAGVNVPSQFLSMLPYLATIVVLALISRNPQWIRVNMPGSIGKPFYPGS
>Mature_306_residues
MESYALLFAATLSAGTVLAIAGLGLLINEKAGIVNLGAEGMLLCAAIAGFATVVHTGNTWLGFAAGMAAGAVLAAIFGVL
VIWLNTNQYATGLALSLFGVGFSAFAGIPYVQAKLPERTPLELPVLSDLPLLGPALFRQHPLVYLTIALAFGLIWFLYRT
RAGLVLRAVGESPESAHALGYPVRRIRLAAVVAGGALCGLAGAYISTVYTPLWVEGMVAGRGWIALALTTFATWRPARVL
LGAYLFGGVTMLQFHLQGAGVNVPSQFLSMLPYLATIVVLALISRNPQWIRVNMPGSIGKPFYPGS

Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG1079

COG function: function code R; Uncharacterized ABC-type transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 32129; Mature: 32129

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESYALLFAATLSAGTVLAIAGLGLLINEKAGIVNLGAEGMLLCAAIAGFATVVHTGNTW
CCCHHHHHHHHHCCCHHHHHHHCCCEEECCCCEEEECCCHHHHHHHHHHHHHHHCCCCCH
LGFAAGMAAGAVLAAIFGVLVIWLNTNQYATGLALSLFGVGFSAFAGIPYVQAKLPERTP
HHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCHHHHCCCCHHHHCCCCCCC
LELPVLSDLPLLGPALFRQHPLVYLTIALAFGLIWFLYRTRAGLVLRAVGESPESAHALG
CCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHC
YPVRRIRLAAVVAGGALCGLAGAYISTVYTPLWVEGMVAGRGWIALALTTFATWRPARVL
CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCHHHHH
LGAYLFGGVTMLQFHLQGAGVNVPSQFLSMLPYLATIVVLALISRNPQWIRVNMPGSIGK
HHHHHHHHHHEEHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
PFYPGS
CCCCCC
>Mature Secondary Structure
MESYALLFAATLSAGTVLAIAGLGLLINEKAGIVNLGAEGMLLCAAIAGFATVVHTGNTW
CCCHHHHHHHHHCCCHHHHHHHCCCEEECCCCEEEECCCHHHHHHHHHHHHHHHCCCCCH
LGFAAGMAAGAVLAAIFGVLVIWLNTNQYATGLALSLFGVGFSAFAGIPYVQAKLPERTP
HHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCHHHHCCCCHHHHCCCCCCC
LELPVLSDLPLLGPALFRQHPLVYLTIALAFGLIWFLYRTRAGLVLRAVGESPESAHALG
CCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHC
YPVRRIRLAAVVAGGALCGLAGAYISTVYTPLWVEGMVAGRGWIALALTTFATWRPARVL
CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCHHHHH
LGAYLFGGVTMLQFHLQGAGVNVPSQFLSMLPYLATIVVLALISRNPQWIRVNMPGSIGK
HHHHHHHHHHEEHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
PFYPGS
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]