| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787365
Identifier: 91787365
GI number: 91787365
Start: 1523353
End: 1524504
Strand: Direct
Name: 91787365
Synonym: Bpro_1471
Alternate gene names: NA
Gene position: 1523353-1524504 (Clockwise)
Preceding gene: 91787363
Following gene: 91787367
Centisome position: 29.29
GC content: 63.89
Gene sequence:
>1152_bases ATGTTTGGATTGAAGCAATACAAAGTCAAGAAAAACGAGCGCGGCCTGCTGCTGCGCAACGGCGATTTCGAACGCGTACT GCAGCCCGGGAAACACTGGGCGTACGCCGGCGCTGACCAGGTTCGGGTGGAAACCTTTGCGATGGAGCAAGCGGCTTTCA CACACAGCCTGGCGGATTACTTCATGGCCAAGGAGCCGGCTGTCGTTGCCCAGGAGTTTGTGCTGGCCGCGCTGTCGGAT TCGCAGGCAGGCCTGCGTTACGAGAACGGCTTGCTGGTGGAAGTACTGGCGCCCGCCACCCGCAAGCTCTACTGGAAGGG CCTGAACGAGGTTCGTGTCGACGTGGTCGATATCGACCAGGGCGTAGCGAACAGCGAAAAGCTGCCCGCCGGCCTGGTGG CGACGCTGGGCCAGACGCAGCTGCGCCAGCGACCGGTGAAGGGGCTGGACGGCGTGCTGCTGGTGCAGGTGCCGGACTTC CATGCCGGCGTGCTGACGCTGGACGGCAAGGTGACCGGGCTGCTCGGCGCCGGCGCGTATGGCTTCTGGCGCTACGGCCG CAAGGTCGAAGTCGAATGCATCGACCTGCGCTCGCAGGCGCTGGAGGTCAGCGGGCAGGAAATCCTCACCCGCGACAAGG TGAGCCTGCGGCTGAACCTGTCGGCCACCTGGCGTTATGAAGATGTGCTGAAGGCGTTTGCCCAGTGGGGCAAGCCGTCG GAGCAGATCTACCGCGAACTGCAGCTGGGTCTGCGCGCGGCCGTAGGGACCCGCACGCTCGACGAGCTGCTGGAGAACAA GGCCGCCCTGGACGACGTCATTGCCGAGCACACCCGTGTCCGGCTGGCGGGCGCTGGCCTGAAGCTGGAAAGCCTGGGCG TGAAAGACATCATCTTGCCCGGCGAGATGAAGACCATCCTGGCGCAGGTGGTGGAAGCCGAGAAGTCTGCCCAGGCCAAC GCGATTCGCCGGCGCGAAGAAACCGCGGCAACGCGCTCGCTGCTCAACACGGCGAAGATCATGGAGGACAACCCGATTGT CCTGCGCATGAAGGAACTGGAGACGCTGGAGCGTGTGGCGGAACGGATCGACAAGATATCGGTGTTCGGAGGACTGGAGC AAGTGCTCAACGGGCTGGTGAAGCTGCGTTGA
Upstream 100 bases:
>100_bases CCTGAAAGTGCCTGCACCCCAAGTCCGCAGCTGTTGCCGATGCGGACCATGTTTTTGTTGAATGAAAAAAGAATAACGGA AAAGAAAACGGAGAAGAAAA
Downstream 100 bases:
>100_bases GTGTTGAAAAGATAGGAAAAGGGCGCGCTGGCACGGATGGGAGCGCCACGCCAAAAATGTTGAAATTATCGGCAGGCCGG GTAGTACCGGGCAGGGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MFGLKQYKVKKNERGLLLRNGDFERVLQPGKHWAYAGADQVRVETFAMEQAAFTHSLADYFMAKEPAVVAQEFVLAALSD SQAGLRYENGLLVEVLAPATRKLYWKGLNEVRVDVVDIDQGVANSEKLPAGLVATLGQTQLRQRPVKGLDGVLLVQVPDF HAGVLTLDGKVTGLLGAGAYGFWRYGRKVEVECIDLRSQALEVSGQEILTRDKVSLRLNLSATWRYEDVLKAFAQWGKPS EQIYRELQLGLRAAVGTRTLDELLENKAALDDVIAEHTRVRLAGAGLKLESLGVKDIILPGEMKTILAQVVEAEKSAQAN AIRRREETAATRSLLNTAKIMEDNPIVLRMKELETLERVAERIDKISVFGGLEQVLNGLVKLR
Sequences:
>Translated_383_residues MFGLKQYKVKKNERGLLLRNGDFERVLQPGKHWAYAGADQVRVETFAMEQAAFTHSLADYFMAKEPAVVAQEFVLAALSD SQAGLRYENGLLVEVLAPATRKLYWKGLNEVRVDVVDIDQGVANSEKLPAGLVATLGQTQLRQRPVKGLDGVLLVQVPDF HAGVLTLDGKVTGLLGAGAYGFWRYGRKVEVECIDLRSQALEVSGQEILTRDKVSLRLNLSATWRYEDVLKAFAQWGKPS EQIYRELQLGLRAAVGTRTLDELLENKAALDDVIAEHTRVRLAGAGLKLESLGVKDIILPGEMKTILAQVVEAEKSAQAN AIRRREETAATRSLLNTAKIMEDNPIVLRMKELETLERVAERIDKISVFGGLEQVLNGLVKLR >Mature_383_residues MFGLKQYKVKKNERGLLLRNGDFERVLQPGKHWAYAGADQVRVETFAMEQAAFTHSLADYFMAKEPAVVAQEFVLAALSD SQAGLRYENGLLVEVLAPATRKLYWKGLNEVRVDVVDIDQGVANSEKLPAGLVATLGQTQLRQRPVKGLDGVLLVQVPDF HAGVLTLDGKVTGLLGAGAYGFWRYGRKVEVECIDLRSQALEVSGQEILTRDKVSLRLNLSATWRYEDVLKAFAQWGKPS EQIYRELQLGLRAAVGTRTLDELLENKAALDDVIAEHTRVRLAGAGLKLESLGVKDIILPGEMKTILAQVVEAEKSAQAN AIRRREETAATRSLLNTAKIMEDNPIVLRMKELETLERVAERIDKISVFGGLEQVLNGLVKLR
Specific function: Unknown
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family [H]
Homologues:
Organism=Caenorhabditis elegans, GI17569497, Length=173, Percent_Identity=27.7456647398844, Blast_Score=71, Evalue=9e-13, Organism=Caenorhabditis elegans, GI32566490, Length=202, Percent_Identity=29.7029702970297, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17570161, Length=191, Percent_Identity=28.2722513089005, Blast_Score=65, Evalue=7e-11, Organism=Caenorhabditis elegans, GI193210507, Length=195, Percent_Identity=28.7179487179487, Blast_Score=65, Evalue=8e-11, Organism=Caenorhabditis elegans, GI193209764, Length=194, Percent_Identity=26.2886597938144, Blast_Score=64, Evalue=1e-10, Organism=Drosophila melanogaster, GI28573263, Length=188, Percent_Identity=28.7234042553192, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI21356845, Length=202, Percent_Identity=26.2376237623762, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI45556022, Length=180, Percent_Identity=28.3333333333333, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI281361631, Length=171, Percent_Identity=26.9005847953216, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI281361633, Length=171, Percent_Identity=26.9005847953216, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI281365664, Length=176, Percent_Identity=26.1363636363636, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI62484448, Length=176, Percent_Identity=26.1363636363636, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI24657857, Length=180, Percent_Identity=27.2222222222222, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR018080 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 42444; Mature: 42444
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGLKQYKVKKNERGLLLRNGDFERVLQPGKHWAYAGADQVRVETFAMEQAAFTHSLADY CCCCCCCEECCCCCCEEEECCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH FMAKEPAVVAQEFVLAALSDSQAGLRYENGLLVEVLAPATRKLYWKGLNEVRVDVVDIDQ HHCCCCHHHHHHHHHHHHCCCCCCCEECCCEEEEECCHHHHHHHHCCCCCEEEEEEECCC GVANSEKLPAGLVATLGQTQLRQRPVKGLDGVLLVQVPDFHAGVLTLDGKVTGLLGAGAY CCCCCCCCCHHHHHHCCHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCEEEEEECCCCH GFWRYGRKVEVECIDLRSQALEVSGQEILTRDKVSLRLNLSATWRYEDVLKAFAQWGKPS HHHHCCCEEEEEEECCHHHHHHCCCHHHHCCCCEEEEEEEEEECCHHHHHHHHHHCCCCH EQIYRELQLGLRAAVGTRTLDELLENKAALDDVIAEHTRVRLAGAGLKLESLGVKDIILP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEECCCCCEEECC GEMKTILAQVVEAEKSAQANAIRRREETAATRSLLNTAKIMEDNPIVLRMKELETLERVA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHH ERIDKISVFGGLEQVLNGLVKLR HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFGLKQYKVKKNERGLLLRNGDFERVLQPGKHWAYAGADQVRVETFAMEQAAFTHSLADY CCCCCCCEECCCCCCEEEECCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH FMAKEPAVVAQEFVLAALSDSQAGLRYENGLLVEVLAPATRKLYWKGLNEVRVDVVDIDQ HHCCCCHHHHHHHHHHHHCCCCCCCEECCCEEEEECCHHHHHHHHCCCCCEEEEEEECCC GVANSEKLPAGLVATLGQTQLRQRPVKGLDGVLLVQVPDFHAGVLTLDGKVTGLLGAGAY CCCCCCCCCHHHHHHCCHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCEEEEEECCCCH GFWRYGRKVEVECIDLRSQALEVSGQEILTRDKVSLRLNLSATWRYEDVLKAFAQWGKPS HHHHCCCEEEEEEECCHHHHHHCCCHHHHCCCCEEEEEEEEEECCHHHHHHHHHHCCCCH EQIYRELQLGLRAAVGTRTLDELLENKAALDDVIAEHTRVRLAGAGLKLESLGVKDIILP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEECCCCCEEECC GEMKTILAQVVEAEKSAQANAIRRREETAATRSLLNTAKIMEDNPIVLRMKELETLERVA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHH ERIDKISVFGGLEQVLNGLVKLR HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]