Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787365

Identifier: 91787365

GI number: 91787365

Start: 1523353

End: 1524504

Strand: Direct

Name: 91787365

Synonym: Bpro_1471

Alternate gene names: NA

Gene position: 1523353-1524504 (Clockwise)

Preceding gene: 91787363

Following gene: 91787367

Centisome position: 29.29

GC content: 63.89

Gene sequence:

>1152_bases
ATGTTTGGATTGAAGCAATACAAAGTCAAGAAAAACGAGCGCGGCCTGCTGCTGCGCAACGGCGATTTCGAACGCGTACT
GCAGCCCGGGAAACACTGGGCGTACGCCGGCGCTGACCAGGTTCGGGTGGAAACCTTTGCGATGGAGCAAGCGGCTTTCA
CACACAGCCTGGCGGATTACTTCATGGCCAAGGAGCCGGCTGTCGTTGCCCAGGAGTTTGTGCTGGCCGCGCTGTCGGAT
TCGCAGGCAGGCCTGCGTTACGAGAACGGCTTGCTGGTGGAAGTACTGGCGCCCGCCACCCGCAAGCTCTACTGGAAGGG
CCTGAACGAGGTTCGTGTCGACGTGGTCGATATCGACCAGGGCGTAGCGAACAGCGAAAAGCTGCCCGCCGGCCTGGTGG
CGACGCTGGGCCAGACGCAGCTGCGCCAGCGACCGGTGAAGGGGCTGGACGGCGTGCTGCTGGTGCAGGTGCCGGACTTC
CATGCCGGCGTGCTGACGCTGGACGGCAAGGTGACCGGGCTGCTCGGCGCCGGCGCGTATGGCTTCTGGCGCTACGGCCG
CAAGGTCGAAGTCGAATGCATCGACCTGCGCTCGCAGGCGCTGGAGGTCAGCGGGCAGGAAATCCTCACCCGCGACAAGG
TGAGCCTGCGGCTGAACCTGTCGGCCACCTGGCGTTATGAAGATGTGCTGAAGGCGTTTGCCCAGTGGGGCAAGCCGTCG
GAGCAGATCTACCGCGAACTGCAGCTGGGTCTGCGCGCGGCCGTAGGGACCCGCACGCTCGACGAGCTGCTGGAGAACAA
GGCCGCCCTGGACGACGTCATTGCCGAGCACACCCGTGTCCGGCTGGCGGGCGCTGGCCTGAAGCTGGAAAGCCTGGGCG
TGAAAGACATCATCTTGCCCGGCGAGATGAAGACCATCCTGGCGCAGGTGGTGGAAGCCGAGAAGTCTGCCCAGGCCAAC
GCGATTCGCCGGCGCGAAGAAACCGCGGCAACGCGCTCGCTGCTCAACACGGCGAAGATCATGGAGGACAACCCGATTGT
CCTGCGCATGAAGGAACTGGAGACGCTGGAGCGTGTGGCGGAACGGATCGACAAGATATCGGTGTTCGGAGGACTGGAGC
AAGTGCTCAACGGGCTGGTGAAGCTGCGTTGA

Upstream 100 bases:

>100_bases
CCTGAAAGTGCCTGCACCCCAAGTCCGCAGCTGTTGCCGATGCGGACCATGTTTTTGTTGAATGAAAAAAGAATAACGGA
AAAGAAAACGGAGAAGAAAA

Downstream 100 bases:

>100_bases
GTGTTGAAAAGATAGGAAAAGGGCGCGCTGGCACGGATGGGAGCGCCACGCCAAAAATGTTGAAATTATCGGCAGGCCGG
GTAGTACCGGGCAGGGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MFGLKQYKVKKNERGLLLRNGDFERVLQPGKHWAYAGADQVRVETFAMEQAAFTHSLADYFMAKEPAVVAQEFVLAALSD
SQAGLRYENGLLVEVLAPATRKLYWKGLNEVRVDVVDIDQGVANSEKLPAGLVATLGQTQLRQRPVKGLDGVLLVQVPDF
HAGVLTLDGKVTGLLGAGAYGFWRYGRKVEVECIDLRSQALEVSGQEILTRDKVSLRLNLSATWRYEDVLKAFAQWGKPS
EQIYRELQLGLRAAVGTRTLDELLENKAALDDVIAEHTRVRLAGAGLKLESLGVKDIILPGEMKTILAQVVEAEKSAQAN
AIRRREETAATRSLLNTAKIMEDNPIVLRMKELETLERVAERIDKISVFGGLEQVLNGLVKLR

Sequences:

>Translated_383_residues
MFGLKQYKVKKNERGLLLRNGDFERVLQPGKHWAYAGADQVRVETFAMEQAAFTHSLADYFMAKEPAVVAQEFVLAALSD
SQAGLRYENGLLVEVLAPATRKLYWKGLNEVRVDVVDIDQGVANSEKLPAGLVATLGQTQLRQRPVKGLDGVLLVQVPDF
HAGVLTLDGKVTGLLGAGAYGFWRYGRKVEVECIDLRSQALEVSGQEILTRDKVSLRLNLSATWRYEDVLKAFAQWGKPS
EQIYRELQLGLRAAVGTRTLDELLENKAALDDVIAEHTRVRLAGAGLKLESLGVKDIILPGEMKTILAQVVEAEKSAQAN
AIRRREETAATRSLLNTAKIMEDNPIVLRMKELETLERVAERIDKISVFGGLEQVLNGLVKLR
>Mature_383_residues
MFGLKQYKVKKNERGLLLRNGDFERVLQPGKHWAYAGADQVRVETFAMEQAAFTHSLADYFMAKEPAVVAQEFVLAALSD
SQAGLRYENGLLVEVLAPATRKLYWKGLNEVRVDVVDIDQGVANSEKLPAGLVATLGQTQLRQRPVKGLDGVLLVQVPDF
HAGVLTLDGKVTGLLGAGAYGFWRYGRKVEVECIDLRSQALEVSGQEILTRDKVSLRLNLSATWRYEDVLKAFAQWGKPS
EQIYRELQLGLRAAVGTRTLDELLENKAALDDVIAEHTRVRLAGAGLKLESLGVKDIILPGEMKTILAQVVEAEKSAQAN
AIRRREETAATRSLLNTAKIMEDNPIVLRMKELETLERVAERIDKISVFGGLEQVLNGLVKLR

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17569497, Length=173, Percent_Identity=27.7456647398844, Blast_Score=71, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI32566490, Length=202, Percent_Identity=29.7029702970297, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17570161, Length=191, Percent_Identity=28.2722513089005, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI193210507, Length=195, Percent_Identity=28.7179487179487, Blast_Score=65, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI193209764, Length=194, Percent_Identity=26.2886597938144, Blast_Score=64, Evalue=1e-10,
Organism=Drosophila melanogaster, GI28573263, Length=188, Percent_Identity=28.7234042553192, Blast_Score=78, Evalue=8e-15,
Organism=Drosophila melanogaster, GI21356845, Length=202, Percent_Identity=26.2376237623762, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45556022, Length=180, Percent_Identity=28.3333333333333, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281361631, Length=171, Percent_Identity=26.9005847953216, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI281361633, Length=171, Percent_Identity=26.9005847953216, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI281365664, Length=176, Percent_Identity=26.1363636363636, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI62484448, Length=176, Percent_Identity=26.1363636363636, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24657857, Length=180, Percent_Identity=27.2222222222222, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 42444; Mature: 42444

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGLKQYKVKKNERGLLLRNGDFERVLQPGKHWAYAGADQVRVETFAMEQAAFTHSLADY
CCCCCCCEECCCCCCEEEECCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
FMAKEPAVVAQEFVLAALSDSQAGLRYENGLLVEVLAPATRKLYWKGLNEVRVDVVDIDQ
HHCCCCHHHHHHHHHHHHCCCCCCCEECCCEEEEECCHHHHHHHHCCCCCEEEEEEECCC
GVANSEKLPAGLVATLGQTQLRQRPVKGLDGVLLVQVPDFHAGVLTLDGKVTGLLGAGAY
CCCCCCCCCHHHHHHCCHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCEEEEEECCCCH
GFWRYGRKVEVECIDLRSQALEVSGQEILTRDKVSLRLNLSATWRYEDVLKAFAQWGKPS
HHHHCCCEEEEEEECCHHHHHHCCCHHHHCCCCEEEEEEEEEECCHHHHHHHHHHCCCCH
EQIYRELQLGLRAAVGTRTLDELLENKAALDDVIAEHTRVRLAGAGLKLESLGVKDIILP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEECCCCCEEECC
GEMKTILAQVVEAEKSAQANAIRRREETAATRSLLNTAKIMEDNPIVLRMKELETLERVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHH
ERIDKISVFGGLEQVLNGLVKLR
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFGLKQYKVKKNERGLLLRNGDFERVLQPGKHWAYAGADQVRVETFAMEQAAFTHSLADY
CCCCCCCEECCCCCCEEEECCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
FMAKEPAVVAQEFVLAALSDSQAGLRYENGLLVEVLAPATRKLYWKGLNEVRVDVVDIDQ
HHCCCCHHHHHHHHHHHHCCCCCCCEECCCEEEEECCHHHHHHHHCCCCCEEEEEEECCC
GVANSEKLPAGLVATLGQTQLRQRPVKGLDGVLLVQVPDFHAGVLTLDGKVTGLLGAGAY
CCCCCCCCCHHHHHHCCHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCEEEEEECCCCH
GFWRYGRKVEVECIDLRSQALEVSGQEILTRDKVSLRLNLSATWRYEDVLKAFAQWGKPS
HHHHCCCEEEEEEECCHHHHHHCCCHHHHCCCCEEEEEEEEEECCHHHHHHHHHHCCCCH
EQIYRELQLGLRAAVGTRTLDELLENKAALDDVIAEHTRVRLAGAGLKLESLGVKDIILP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEECCCCCEEECC
GEMKTILAQVVEAEKSAQANAIRRREETAATRSLLNTAKIMEDNPIVLRMKELETLERVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHH
ERIDKISVFGGLEQVLNGLVKLR
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]