| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787363
Identifier: 91787363
GI number: 91787363
Start: 1520384
End: 1520989
Strand: Direct
Name: 91787363
Synonym: Bpro_1469
Alternate gene names: NA
Gene position: 1520384-1520989 (Clockwise)
Preceding gene: 91787358
Following gene: 91787365
Centisome position: 29.24
GC content: 67.82
Gene sequence:
>606_bases ATGCCACGCTCCGCCCGAACCCCTGCCGCCGCGCCGGAGGCCGACCGGGTGCAGCTCGGCCTCAGGCTGCGCGAACACCG CAAGGCACGGCGGCTGACGCTCAAGGACCTGTCCGGCCGTTCGGGCGTGGCGCTCTCCACGCTGTCCAAAATGGAGCTGG GCCAGATGTCGGTCAGCTACGAAAAGCTGGCCGCCGTGGCGCGGGCGCTGTCGCTGGATGTGGGGCAGCTGCTGGATGCG CGGGCCGCAGCGCCGGCCGGTGCGGTAACGCCCGTCGTGGTGTGGTCCGAAGCTGACGGGGCACCGGCCTACAGTTCGGG CAATTACGACTACCGCATGCTCGCGACCGGCTTCCCGGGCAAGCGAATGACGCCGCTGCACGGCCGCATCCTGGCGCGCG AGCGGGGCCAGTTTCCTGATTTCATTCGCCACCAGGGGCAGGAATTCGTGACAGTGCTGTCCGGCCGGGTGCGCATCGAG TTCGAGACCGGCGACATCATCGAAGTCGGCCGTCATGAGTCGGCGTATTTCGACAGCGGTGTGGGCCACATCTACCTCTC GCTGGGCCGCGCTGATGCGCAGGTGTTGGTGGTGATGAGTGAATAG
Upstream 100 bases:
>100_bases ATAACAATGTCATATTCTCGCATTTGAGAATTCTCACATGCGAGAATCGTGCCTGTCCAGTGCCATTCATCCATTTTCTG TGTAACCAAGGGAAAACACC
Downstream 100 bases:
>100_bases CGGACGGTCCGACCCTTGTTGCCATGCGTTGCGCTCCTGCAGAGGCATCAGGCTGACAGCTTCTCCCAGGTCAGGTCAAA CTTCAGCAAGTACTTGCGCA
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family; Transcriptional Regulator HTH_3 Family; Helix-Turn-Helix Family; Helix-Turn-Helix Domain-Containing Protein; XRE Family-Like Protein; Transcriptional Regulator Protein; Transcriptional Regulator Xre Family; Transcriptional Regulator XRE Family With Cupin Sensor; Cupin 2 Conserved Barrel Domain Protein; HTH_3family Transcriptional Regulator
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MPRSARTPAAAPEADRVQLGLRLREHRKARRLTLKDLSGRSGVALSTLSKMELGQMSVSYEKLAAVARALSLDVGQLLDA RAAAPAGAVTPVVVWSEADGAPAYSSGNYDYRMLATGFPGKRMTPLHGRILARERGQFPDFIRHQGQEFVTVLSGRVRIE FETGDIIEVGRHESAYFDSGVGHIYLSLGRADAQVLVVMSE
Sequences:
>Translated_201_residues MPRSARTPAAAPEADRVQLGLRLREHRKARRLTLKDLSGRSGVALSTLSKMELGQMSVSYEKLAAVARALSLDVGQLLDA RAAAPAGAVTPVVVWSEADGAPAYSSGNYDYRMLATGFPGKRMTPLHGRILARERGQFPDFIRHQGQEFVTVLSGRVRIE FETGDIIEVGRHESAYFDSGVGHIYLSLGRADAQVLVVMSE >Mature_200_residues PRSARTPAAAPEADRVQLGLRLREHRKARRLTLKDLSGRSGVALSTLSKMELGQMSVSYEKLAAVARALSLDVGQLLDAR AAAPAGAVTPVVVWSEADGAPAYSSGNYDYRMLATGFPGKRMTPLHGRILARERGQFPDFIRHQGQEFVTVLSGRVRIEF ETGDIIEVGRHESAYFDSGVGHIYLSLGRADAQVLVVMSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21849; Mature: 21718
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSARTPAAAPEADRVQLGLRLREHRKARRLTLKDLSGRSGVALSTLSKMELGQMSVSY CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHCCCCCCEEHHHHHHHHHHHHHHHH EKLAAVARALSLDVGQLLDARAAAPAGAVTPVVVWSEADGAPAYSSGNYDYRMLATGFPG HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCC KRMTPLHGRILARERGQFPDFIRHQGQEFVTVLSGRVRIEFETGDIIEVGRHESAYFDSG CCCCCHHHHHEEHHCCCCCHHHHHCCHHEEEEECCEEEEEECCCCEEEECCCCCHHHCCC VGHIYLSLGRADAQVLVVMSE CCEEEEEECCCCEEEEEEEEC >Mature Secondary Structure PRSARTPAAAPEADRVQLGLRLREHRKARRLTLKDLSGRSGVALSTLSKMELGQMSVSY CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHCCCCCCEEHHHHHHHHHHHHHHHH EKLAAVARALSLDVGQLLDARAAAPAGAVTPVVVWSEADGAPAYSSGNYDYRMLATGFPG HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCC KRMTPLHGRILARERGQFPDFIRHQGQEFVTVLSGRVRIEFETGDIIEVGRHESAYFDSG CCCCCHHHHHEEHHCCCCCHHHHHCCHHEEEEECCEEEEEECCCCEEEECCCCCHHHCCC VGHIYLSLGRADAQVLVVMSE CCEEEEEECCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA