Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yiaN [C]

Identifier: 91787351

GI number: 91787351

Start: 1507121

End: 1508380

Strand: Direct

Name: yiaN [C]

Synonym: Bpro_1457

Alternate gene names: 91787351

Gene position: 1507121-1508380 (Clockwise)

Preceding gene: 91787350

Following gene: 91787352

Centisome position: 28.98

GC content: 64.29

Gene sequence:

>1260_bases
ATGAGCGCGCTCATCCTCCTGGTGTTCCTGGGCGCTGCCACGGCAGCGGTACCGATTGCACATGCGCTGCTGATGGCCTC
GGTGGCAGCCGCCACGGTCTCGGAGCGCATCCCGCTGGATCTGGTCGTGCAGCAGATGGTGGCGCAGGTCCAGAGCTTCC
CGCTGATTGCCATTCCCTTCTTCATGCTCACCGGAACCCTGATGATGGGCGGCAAGCTCGGTGAATCCCTGATCGGCGTG
CTGTCCACGCTGATTGGCCGCTTTCACGGCGGGCCGGGCCAGGTGGGCGTGCTGTCGTCCACCATTTTTGGCGGTGTCTC
CGGCTCGGCGGTCGCCGACGCGTCCGCCATCGGTTCGCTGCTGCTTCCCTGGCAGAAGCGGCTGGGCTATCCGCCCGCAT
TCTCCGCCGCCACGCTGGCCGCGGCCGCAACGATTGACATCCTGATTCCGCCATCGATTCCGATGATCCTGTTCGCGCTG
ACGTCCAATGCGTCGATCGCGGCGCTATTCGTCGCCGGCATTTTGCCGGGGCTGATGATGTGTGCCGGTTTCATGGGAGT
CTGCTGGTGTGTTGGCAAGCGCCGCAATTTTCCGCGAGAGACGCGCCCGATCGACTGGCCGGTATTTCGCAAGCAGCTGG
CCTACGCTTCGCCCGCGCTGGTGCTGCCGGTGCTGATCGTGATCTTCCTGCGCTTCGGTATTGCCACGCCCACCGAGGTC
AGTGTCCTGTCCACCGCCTACTCGGGCCTGATTTCCGCGCTGATTTACCGCGATCTGAGCATCAGGCGCCTGCACTCGGC
CATCGTGGAGGCGGGTCTGGCCACGGGCGTGGTGCTGCTGGTGATCATGGCTTCGGCGTCGGTCGGGTGGTTGCTGACCT
TCGACCACATGCCCGACGGCGTGGTGCACTGGGCCCAGGCTCACCTGCACGCCGACTGGGCCGTGATCCTGCTGATGAAC
GGCCTCATGCTGGTTGCCGGCATGTTCATCGACCTGCCGGCTGCGGTGCTGCTGCTCACGCCGGTGTTCGTGCCTCTGGC
CAACAGCATCGGCATGGACCTGGTGCAGCTCGGCATCATGATGACGGTGAACCTTGCCATCGGGCTGTACACGCCCCCGG
TGGGGACGACGCTGTTCATCACCAGTTCGGTCGCCAGGGTCAAGGTGGGGGAAACCGTGCGCGAGCTGATCCCCTTCTAT
TGTGTGGCGTTCATCATCCTGCTGATTGTTTCGTACGTTCCGGCGTCGATCCTGCGTTGA

Upstream 100 bases:

>100_bases
TCATGCTGGCCGTGCTGGCCCTGCAGTCCGCATGGCAGGTCTGGACGCAGGGTGTCGAGGCGGCCGGCGCTGCTGGCCAG
ACTCACCTGGTGAGCAGCAC

Downstream 100 bases:

>100_bases
GGTCCCGTCAATGAACCCGATCCCCTACCGCAAGGAACGCATTGTTTCCATTTCGGGCGCCCCCTACGACGGGCATCCGG
TGCCGGCCATGCTGGCCAGC

Product: TRAP dicarboxylate transporter subunit DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MSALILLVFLGAATAAVPIAHALLMASVAAATVSERIPLDLVVQQMVAQVQSFPLIAIPFFMLTGTLMMGGKLGESLIGV
LSTLIGRFHGGPGQVGVLSSTIFGGVSGSAVADASAIGSLLLPWQKRLGYPPAFSAATLAAAATIDILIPPSIPMILFAL
TSNASIAALFVAGILPGLMMCAGFMGVCWCVGKRRNFPRETRPIDWPVFRKQLAYASPALVLPVLIVIFLRFGIATPTEV
SVLSTAYSGLISALIYRDLSIRRLHSAIVEAGLATGVVLLVIMASASVGWLLTFDHMPDGVVHWAQAHLHADWAVILLMN
GLMLVAGMFIDLPAAVLLLTPVFVPLANSIGMDLVQLGIMMTVNLAIGLYTPPVGTTLFITSSVARVKVGETVRELIPFY
CVAFIILLIVSYVPASILR

Sequences:

>Translated_419_residues
MSALILLVFLGAATAAVPIAHALLMASVAAATVSERIPLDLVVQQMVAQVQSFPLIAIPFFMLTGTLMMGGKLGESLIGV
LSTLIGRFHGGPGQVGVLSSTIFGGVSGSAVADASAIGSLLLPWQKRLGYPPAFSAATLAAAATIDILIPPSIPMILFAL
TSNASIAALFVAGILPGLMMCAGFMGVCWCVGKRRNFPRETRPIDWPVFRKQLAYASPALVLPVLIVIFLRFGIATPTEV
SVLSTAYSGLISALIYRDLSIRRLHSAIVEAGLATGVVLLVIMASASVGWLLTFDHMPDGVVHWAQAHLHADWAVILLMN
GLMLVAGMFIDLPAAVLLLTPVFVPLANSIGMDLVQLGIMMTVNLAIGLYTPPVGTTLFITSSVARVKVGETVRELIPFY
CVAFIILLIVSYVPASILR
>Mature_418_residues
SALILLVFLGAATAAVPIAHALLMASVAAATVSERIPLDLVVQQMVAQVQSFPLIAIPFFMLTGTLMMGGKLGESLIGVL
STLIGRFHGGPGQVGVLSSTIFGGVSGSAVADASAIGSLLLPWQKRLGYPPAFSAATLAAAATIDILIPPSIPMILFALT
SNASIAALFVAGILPGLMMCAGFMGVCWCVGKRRNFPRETRPIDWPVFRKQLAYASPALVLPVLIVIFLRFGIATPTEVS
VLSTAYSGLISALIYRDLSIRRLHSAIVEAGLATGVVLLVIMASASVGWLLTFDHMPDGVVHWAQAHLHADWAVILLMNG
LMLVAGMFIDLPAAVLLLTPVFVPLANSIGMDLVQLGIMMTVNLAIGLYTPPVGTTLFITSSVARVKVGETVRELIPFYC
VAFIILLIVSYVPASILR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yiaN/ygiK family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=399, Percent_Identity=35.3383458646617, Blast_Score=196, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 44125; Mature: 43994

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALILLVFLGAATAAVPIAHALLMASVAAATVSERIPLDLVVQQMVAQVQSFPLIAIPF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHH
FMLTGTLMMGGKLGESLIGVLSTLIGRFHGGPGQVGVLSSTIFGGVSGSAVADASAIGSL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
LLPWQKRLGYPPAFSAATLAAAATIDILIPPSIPMILFALTSNASIAALFVAGILPGLMM
HHHHHHHCCCCCCCHHHHHHHHHHEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
CAGFMGVCWCVGKRRNFPRETRPIDWPVFRKQLAYASPALVLPVLIVIFLRFGIATPTEV
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHH
SVLSTAYSGLISALIYRDLSIRRLHSAIVEAGLATGVVLLVIMASASVGWLLTFDHMPDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCH
VVHWAQAHLHADWAVILLMNGLMLVAGMFIDLPAAVLLLTPVFVPLANSIGMDLVQLGIM
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
MTVNLAIGLYTPPVGTTLFITSSVARVKVGETVRELIPFYCVAFIILLIVSYVPASILR
HHHHHHHEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SALILLVFLGAATAAVPIAHALLMASVAAATVSERIPLDLVVQQMVAQVQSFPLIAIPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHH
FMLTGTLMMGGKLGESLIGVLSTLIGRFHGGPGQVGVLSSTIFGGVSGSAVADASAIGSL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
LLPWQKRLGYPPAFSAATLAAAATIDILIPPSIPMILFALTSNASIAALFVAGILPGLMM
HHHHHHHCCCCCCCHHHHHHHHHHEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
CAGFMGVCWCVGKRRNFPRETRPIDWPVFRKQLAYASPALVLPVLIVIFLRFGIATPTEV
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHH
SVLSTAYSGLISALIYRDLSIRRLHSAIVEAGLATGVVLLVIMASASVGWLLTFDHMPDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCH
VVHWAQAHLHADWAVILLMNGLMLVAGMFIDLPAAVLLLTPVFVPLANSIGMDLVQLGIM
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
MTVNLAIGLYTPPVGTTLFITSSVARVKVGETVRELIPFYCVAFIILLIVSYVPASILR
HHHHHHHEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]