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The map label for this gene is yiaM [C]

Identifier: 91787350

GI number: 91787350

Start: 1506612

End: 1507124

Strand: Direct

Name: yiaM [C]

Synonym: Bpro_1456

Alternate gene names: 91787350

Gene position: 1506612-1507124 (Clockwise)

Preceding gene: 91787349

Following gene: 91787351

Centisome position: 28.97

GC content: 65.11

Gene sequence:

>513_bases
ATGAAGCGCACTGAACGCGGAATTATTCTGGTCTGCCAGGTTGTGATGTGGGTCACCACCAGCCTGATTTTCATGATCCT
GTGTGCCAACACAATCCTGCGCTATGCCAGCGGCAGCAGCCTGCAATGGGCCTCCGAGGTGCCGGAGCTGCTGTTTCCCT
GGCTGGTCACTGCCGGCGTCGTGATGGCGGCCGCGCACGGCTCGCACATCACCACGACATTCCTGATGGAAAAACTCTCG
CCGGCGACGCGGCGGCGGGTGGCCACCGCGGTCTGGCTCGGAGTCGCGGGGCTTTACGGCACGCTGACGGTGGCCACCGC
GCGCATGATCGAGATCGTGCATGGCGAGGCCAGCCCGATCCTGAACGTGCCCGGTTCGGTGACCTATGGCTGCGTCCTGG
TCGGCATGGTCATGCTGGCCGTGCTGGCCCTGCAGTCCGCATGGCAGGTCTGGACGCAGGGTGTCGAGGCGGCCGGCGCT
GCTGGCCAGACTCACCTGGTGAGCAGCACATGA

Upstream 100 bases:

>100_bases
CATTCGTCAAGAGGGTCATCACCGCCGCGCGCGGCGTCTGATTCGCCTGATTTCCATCGCTGCGCCTCCATGAGGGGGCG
GCCCATTCAAGGAATTTGCC

Downstream 100 bases:

>100_bases
GCGCGCTCATCCTCCTGGTGTTCCTGGGCGCTGCCACGGCAGCGGTACCGATTGCACATGCGCTGCTGATGGCCTCGGTG
GCAGCCGCCACGGTCTCGGA

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MKRTERGIILVCQVVMWVTTSLIFMILCANTILRYASGSSLQWASEVPELLFPWLVTAGVVMAAAHGSHITTTFLMEKLS
PATRRRVATAVWLGVAGLYGTLTVATARMIEIVHGEASPILNVPGSVTYGCVLVGMVMLAVLALQSAWQVWTQGVEAAGA
AGQTHLVSST

Sequences:

>Translated_170_residues
MKRTERGIILVCQVVMWVTTSLIFMILCANTILRYASGSSLQWASEVPELLFPWLVTAGVVMAAAHGSHITTTFLMEKLS
PATRRRVATAVWLGVAGLYGTLTVATARMIEIVHGEASPILNVPGSVTYGCVLVGMVMLAVLALQSAWQVWTQGVEAAGA
AGQTHLVSST
>Mature_170_residues
MKRTERGIILVCQVVMWVTTSLIFMILCANTILRYASGSSLQWASEVPELLFPWLVTAGVVMAAAHGSHITTTFLMEKLS
PATRRRVATAVWLGVAGLYGTLTVATARMIEIVHGEASPILNVPGSVTYGCVLVGMVMLAVLALQSAWQVWTQGVEAAGA
AGQTHLVSST

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790002, Length=145, Percent_Identity=30.3448275862069, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007387
- InterPro:   IPR018389
- InterPro:   IPR006311
- InterPro:   IPR004682 [H]

Pfam domain/function: PF04290 DctQ; PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 18115; Mature: 18115

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTERGIILVCQVVMWVTTSLIFMILCANTILRYASGSSLQWASEVPELLFPWLVTAGV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
VMAAAHGSHITTTFLMEKLSPATRRRVATAVWLGVAGLYGTLTVATARMIEIVHGEASPI
HHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LNVPGSVTYGCVLVGMVMLAVLALQSAWQVWTQGVEAAGAAGQTHLVSST
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKRTERGIILVCQVVMWVTTSLIFMILCANTILRYASGSSLQWASEVPELLFPWLVTAGV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
VMAAAHGSHITTTFLMEKLSPATRRRVATAVWLGVAGLYGTLTVATARMIEIVHGEASPI
HHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LNVPGSVTYGCVLVGMVMLAVLALQSAWQVWTQGVEAAGAAGQTHLVSST
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]