| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yflP [H]
Identifier: 91787346
GI number: 91787346
Start: 1502707
End: 1503678
Strand: Direct
Name: yflP [H]
Synonym: Bpro_1452
Alternate gene names: 91787346
Gene position: 1502707-1503678 (Clockwise)
Preceding gene: 91787345
Following gene: 91787348
Centisome position: 28.9
GC content: 68.93
Gene sequence:
>972_bases ATGAAGCGCGTGTCCGTCCTGCTGAGCCTGCTGAGCTTTGTCGGTGCGCTGGCCCATGCAGGCGCGCTGGAGGGAGCGCG CTGCATCGCGCCTGCCAAGCCGGGAGGCGGTTTTGACCTGACCTGCCAGCTGGCGCGTGCCGCCCTGCAGGAAGCGGGTC TTACCCGTGCGCCACTGCCCATCGTTTACCAGCCAGGCGGCATTGGTGCCATGGCTTTCAAAAGCGTGGTGACGCAAAGG CCGGCCGATGGCCAGGCGATCGTCGCGTTTTCTTCGGGCTCGCTGCTCAACCTGGCGCAGGGCCGCTTTGGCCCCTACAC GGCGCGCGACGTGCGCTGGATCGCCAGCCTGGGGCTGGACTACGGCGTGATTGCCGTGCGCCGTGATGCGCCGTTCCAGA CACTCGCGCAATTGCTGGGCGCACTGCGTGAGTCACCGAACCGCATCGTCTTTGGTGGCGGCGGGTCCATCGGCAGCCAG GACTGGATGAAGGCGGCGCTGCTCGCCCGGGCTGCCGGCGTGAGCCACAAGGTGATGCGTTTCGTGGCCTTTGAAGGCGG CGGGGAAGCGTTGACCGCGCTGCGTGGTGACCATGTGCAGGTGCTGGCCGGGGATGCCGCCGAGGTGGCCCGGCAGATCG ATCAGGGCGCGCCGGTCCGGGTGCTGGCCGTGCTGGCGGCCGAGCGCCTGCCGGGGCGCTGGGCCCAGGTTCCCACCGCC AAAGAACAGGGCTTTGACATCCGCTGGCCCATTGTGCGCGGGGTCTACCTCGGGCCGGCGGTCAGTGAGCGGGAGCAGCG CGAATGGGCCGAAGCGCTGGGCCGCGCGATGGCGCATCCGTCCTTTCCCCGCGAACTGGAACGCGCCGGTTTTCAACCCG GCGGGCTGACTGGCGCGGCGCTTGACGCGCTGATCGACAAGCAGGTCGGCGAATACCGTCAGTTGGCCAGGGAGTTTGGC GTGTCCCGCTGA
Upstream 100 bases:
>100_bases CGATTGCCCGCTCGGTGGCCGAGCGCCACGGCGGCCGGCTGCGCATTGAGCCGACGCCGGCAGCGGATGGCACCTGTGTG GCACTGTGGTGGCCCCGATC
Downstream 100 bases:
>100_bases GGTCGGCGTGCAGGAGTCAGGAGGCCATCTGCTTCGGCACTGCCGACCCCGATAGTTCGTTAACCTGGGTGCCCAGCCAC TCGAGGAATTGCGCCACCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MKRVSVLLSLLSFVGALAHAGALEGARCIAPAKPGGGFDLTCQLARAALQEAGLTRAPLPIVYQPGGIGAMAFKSVVTQR PADGQAIVAFSSGSLLNLAQGRFGPYTARDVRWIASLGLDYGVIAVRRDAPFQTLAQLLGALRESPNRIVFGGGGSIGSQ DWMKAALLARAAGVSHKVMRFVAFEGGGEALTALRGDHVQVLAGDAAEVARQIDQGAPVRVLAVLAAERLPGRWAQVPTA KEQGFDIRWPIVRGVYLGPAVSEREQREWAEALGRAMAHPSFPRELERAGFQPGGLTGAALDALIDKQVGEYRQLAREFG VSR
Sequences:
>Translated_323_residues MKRVSVLLSLLSFVGALAHAGALEGARCIAPAKPGGGFDLTCQLARAALQEAGLTRAPLPIVYQPGGIGAMAFKSVVTQR PADGQAIVAFSSGSLLNLAQGRFGPYTARDVRWIASLGLDYGVIAVRRDAPFQTLAQLLGALRESPNRIVFGGGGSIGSQ DWMKAALLARAAGVSHKVMRFVAFEGGGEALTALRGDHVQVLAGDAAEVARQIDQGAPVRVLAVLAAERLPGRWAQVPTA KEQGFDIRWPIVRGVYLGPAVSEREQREWAEALGRAMAHPSFPRELERAGFQPGGLTGAALDALIDKQVGEYRQLAREFG VSR >Mature_323_residues MKRVSVLLSLLSFVGALAHAGALEGARCIAPAKPGGGFDLTCQLARAALQEAGLTRAPLPIVYQPGGIGAMAFKSVVTQR PADGQAIVAFSSGSLLNLAQGRFGPYTARDVRWIASLGLDYGVIAVRRDAPFQTLAQLLGALRESPNRIVFGGGGSIGSQ DWMKAALLARAAGVSHKVMRFVAFEGGGEALTALRGDHVQVLAGDAAEVARQIDQGAPVRVLAVLAAERLPGRWAQVPTA KEQGFDIRWPIVRGVYLGPAVSEREQREWAEALGRAMAHPSFPRELERAGFQPGGLTGAALDALIDKQVGEYRQLAREFG VSR
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34138; Mature: 34138
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVSVLLSLLSFVGALAHAGALEGARCIAPAKPGGGFDLTCQLARAALQEAGLTRAPLP CHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC IVYQPGGIGAMAFKSVVTQRPADGQAIVAFSSGSLLNLAQGRFGPYTARDVRWIASLGLD EEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEHHCCCCCCCCHHHHHHHHHHCCC YGVIAVRRDAPFQTLAQLLGALRESPNRIVFGGGGSIGSQDWMKAALLARAAGVSHKVMR CCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHH FVAFEGGGEALTALRGDHVQVLAGDAAEVARQIDQGAPVRVLAVLAAERLPGRWAQVPTA HHHCCCCCCEEHHCCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC KEQGFDIRWPIVRGVYLGPAVSEREQREWAEALGRAMAHPSFPRELERAGFQPGGLTGAA HHCCCCEECHHHHCEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHH LDALIDKQVGEYRQLAREFGVSR HHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKRVSVLLSLLSFVGALAHAGALEGARCIAPAKPGGGFDLTCQLARAALQEAGLTRAPLP CHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC IVYQPGGIGAMAFKSVVTQRPADGQAIVAFSSGSLLNLAQGRFGPYTARDVRWIASLGLD EEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEHHCCCCCCCCHHHHHHHHHHCCC YGVIAVRRDAPFQTLAQLLGALRESPNRIVFGGGGSIGSQDWMKAALLARAAGVSHKVMR CCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHH FVAFEGGGEALTALRGDHVQVLAGDAAEVARQIDQGAPVRVLAVLAAERLPGRWAQVPTA HHHCCCCCCEEHHCCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC KEQGFDIRWPIVRGVYLGPAVSEREQREWAEALGRAMAHPSFPRELERAGFQPGGLTGAA HHCCCCEECHHHHCEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHH LDALIDKQVGEYRQLAREFGVSR HHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]