| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is fabG [C]
Identifier: 91787348
GI number: 91787348
Start: 1504728
End: 1505477
Strand: Direct
Name: fabG [C]
Synonym: Bpro_1454
Alternate gene names: 91787348
Gene position: 1504728-1505477 (Clockwise)
Preceding gene: 91787346
Following gene: 91787349
Centisome position: 28.94
GC content: 67.33
Gene sequence:
>750_bases ATGTTGCTTAAAGACAGAGTCGCCGTGGTCACCGGCGGCGCAGGCCCCAACGGCCTGGGTTTCGCCACCGCCCGCATGAT GGCTGCGCAGGGCGCGACCATCATCATTCTTGACCTTTCGCAGGCCGACCCGGCCGCCGCGGCGGCCCGGCTGGGGCCAC AGCACATGGGCCTGGTGGCCGATGTGACGAACAAGGCCTCGTGCGACACGGCGGTGGCCGCGGTTCTGGACGCCAAGGGC CGGATCGACATTCTGGTCAACAACGCCGGCATAACGCAGCCGCGCAAGACCCTGGACATCTCGCCCGAGGACTATGACGC GGTGCTGGACGTCAGCCTGCGCGGCACGCTGGTCGCCTCGCAGGCGGTGCTGCCCACCATGCTGGCGCAAAAGCAGGGCT CCATCGTGTGCATCTCCTCGGTGTCGGCACAGCGCGGCGGCGGCATCCTCGGCGGGCCGCACTATTCGGCCGCGAAGGCG GGCGTGCTGGGCCTGGCACGCGCCATGGCACGCGAGTACGGCGGCCAGGGCATCAGGGTGAACTGCGTCACTCCCGGCCT GATTGCCACCGATATCAACAAGGGCAAGATCCCCGACGACAAGCGCCAGGCCATTCTGGACGGCATTCCGCTGGGCTACA TCGGTGCGCCGGATGACGTGGCCGGCTGCGTCGTGTTTCTCGCCAGCGATCTGTCCGGCTATTGCACCGGCATCACGCTG GACGTCAACGGCGGCATGCTGATTCATTGA
Upstream 100 bases:
>100_bases ACTGCAACATGACGAATTTTCACTTGATCTTGAGATTCTATCGTTTGTGTCAAGGTCTGTTTATCTCCAGAATCGCGGCT ACTTCACAAGGAGACAGCAG
Downstream 100 bases:
>100_bases GCGGTTCGCTGCGCCGTTCCTCATCAAAAAAACCGCTTGCAGCGCGGCATCGCTGCCTCGACAACATCAGGAGACAAGAC AAATGACACGATTCAACATT
Product: short-chain dehydrogenase/reductase SDR
Products: (3R)-hydroxyacyl-[acyl-carrier-protein]; NADP; NADPH; Proton; beta-ketoacyl-ACP [C]
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MLLKDRVAVVTGGAGPNGLGFATARMMAAQGATIIILDLSQADPAAAAARLGPQHMGLVADVTNKASCDTAVAAVLDAKG RIDILVNNAGITQPRKTLDISPEDYDAVLDVSLRGTLVASQAVLPTMLAQKQGSIVCISSVSAQRGGGILGGPHYSAAKA GVLGLARAMAREYGGQGIRVNCVTPGLIATDINKGKIPDDKRQAILDGIPLGYIGAPDDVAGCVVFLASDLSGYCTGITL DVNGGMLIH
Sequences:
>Translated_249_residues MLLKDRVAVVTGGAGPNGLGFATARMMAAQGATIIILDLSQADPAAAAARLGPQHMGLVADVTNKASCDTAVAAVLDAKG RIDILVNNAGITQPRKTLDISPEDYDAVLDVSLRGTLVASQAVLPTMLAQKQGSIVCISSVSAQRGGGILGGPHYSAAKA GVLGLARAMAREYGGQGIRVNCVTPGLIATDINKGKIPDDKRQAILDGIPLGYIGAPDDVAGCVVFLASDLSGYCTGITL DVNGGMLIH >Mature_249_residues MLLKDRVAVVTGGAGPNGLGFATARMMAAQGATIIILDLSQADPAAAAARLGPQHMGLVADVTNKASCDTAVAAVLDAKG RIDILVNNAGITQPRKTLDISPEDYDAVLDVSLRGTLVASQAVLPTMLAQKQGSIVCISSVSAQRGGGILGGPHYSAAKA GVLGLARAMAREYGGQGIRVNCVTPGLIATDINKGKIPDDKRQAILDGIPLGYIGAPDDVAGCVVFLASDLSGYCTGITL DVNGGMLIH
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=259, Percent_Identity=37.4517374517375, Blast_Score=140, Evalue=8e-34, Organism=Homo sapiens, GI40254992, Length=242, Percent_Identity=35.1239669421488, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI32483357, Length=248, Percent_Identity=33.8709677419355, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI19923817, Length=263, Percent_Identity=32.319391634981, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI66933014, Length=225, Percent_Identity=33.3333333333333, Blast_Score=115, Evalue=3e-26, Organism=Homo sapiens, GI5031737, Length=249, Percent_Identity=34.136546184739, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI126723750, Length=253, Percent_Identity=31.6205533596838, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI7705925, Length=249, Percent_Identity=31.3253012048193, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI59889578, Length=230, Percent_Identity=32.6086956521739, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI4758504, Length=202, Percent_Identity=37.1287128712871, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI4504505, Length=251, Percent_Identity=31.4741035856574, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI33667109, Length=198, Percent_Identity=35.8585858585859, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI10190704, Length=253, Percent_Identity=30.8300395256917, Blast_Score=94, Evalue=9e-20, Organism=Homo sapiens, GI83715985, Length=182, Percent_Identity=36.8131868131868, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI210032110, Length=205, Percent_Identity=26.3414634146341, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI4503301, Length=227, Percent_Identity=24.6696035242291, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI126723191, Length=185, Percent_Identity=32.972972972973, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI20149619, Length=215, Percent_Identity=28.8372093023256, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI7706318, Length=202, Percent_Identity=29.7029702970297, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI40807363, Length=194, Percent_Identity=29.8969072164948, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI31542939, Length=207, Percent_Identity=28.5024154589372, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI109715829, Length=240, Percent_Identity=25, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1787335, Length=248, Percent_Identity=37.9032258064516, Blast_Score=167, Evalue=5e-43, Organism=Escherichia coli, GI87082100, Length=255, Percent_Identity=36.078431372549, Blast_Score=138, Evalue=4e-34, Organism=Escherichia coli, GI1789208, Length=252, Percent_Identity=37.3015873015873, Blast_Score=137, Evalue=5e-34, Organism=Escherichia coli, GI87082160, Length=250, Percent_Identity=35.2, Blast_Score=124, Evalue=6e-30, Organism=Escherichia coli, GI1790717, Length=244, Percent_Identity=32.3770491803279, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI1788459, Length=249, Percent_Identity=33.7349397590361, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1787905, Length=247, Percent_Identity=30.7692307692308, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1786812, Length=248, Percent_Identity=31.0483870967742, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI2367175, Length=251, Percent_Identity=30.2788844621514, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI2367365, Length=232, Percent_Identity=32.3275862068966, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1789057, Length=265, Percent_Identity=29.4339622641509, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1788891, Length=234, Percent_Identity=26.9230769230769, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789378, Length=259, Percent_Identity=30.1158301158301, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787526, Length=251, Percent_Identity=27.4900398406374, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787820, Length=230, Percent_Identity=26.0869565217391, Blast_Score=70, Evalue=9e-14, Organism=Caenorhabditis elegans, GI25147288, Length=249, Percent_Identity=36.9477911646586, Blast_Score=138, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=33.6032388663968, Blast_Score=126, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17560676, Length=251, Percent_Identity=32.6693227091633, Blast_Score=125, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17559104, Length=265, Percent_Identity=33.2075471698113, Blast_Score=113, Evalue=9e-26, Organism=Caenorhabditis elegans, GI17560332, Length=265, Percent_Identity=31.6981132075472, Blast_Score=110, Evalue=6e-25, Organism=Caenorhabditis elegans, GI17538480, Length=260, Percent_Identity=31.9230769230769, Blast_Score=107, Evalue=5e-24, Organism=Caenorhabditis elegans, GI17551412, Length=263, Percent_Identity=31.5589353612167, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17538486, Length=263, Percent_Identity=31.9391634980989, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17544670, Length=262, Percent_Identity=30.1526717557252, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17561402, Length=253, Percent_Identity=31.6205533596838, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17565030, Length=266, Percent_Identity=33.4586466165414, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI115534694, Length=246, Percent_Identity=30.0813008130081, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17562904, Length=269, Percent_Identity=29.7397769516729, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=30.952380952381, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17561272, Length=191, Percent_Identity=30.3664921465969, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17562910, Length=269, Percent_Identity=28.2527881040892, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17562906, Length=262, Percent_Identity=29.0076335877863, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI72000259, Length=258, Percent_Identity=30.2325581395349, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17560150, Length=259, Percent_Identity=29.3436293436293, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17563726, Length=261, Percent_Identity=28.735632183908, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71994604, Length=197, Percent_Identity=30.9644670050761, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17531453, Length=262, Percent_Identity=29.7709923664122, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17538182, Length=258, Percent_Identity=30.6201550387597, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17568967, Length=192, Percent_Identity=32.2916666666667, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17536025, Length=262, Percent_Identity=28.2442748091603, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI193204405, Length=266, Percent_Identity=27.8195488721804, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17562990, Length=256, Percent_Identity=30.859375, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17562908, Length=261, Percent_Identity=27.2030651340996, Blast_Score=78, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17536651, Length=264, Percent_Identity=28.030303030303, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17508895, Length=197, Percent_Identity=31.9796954314721, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17564282, Length=193, Percent_Identity=27.4611398963731, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17560220, Length=259, Percent_Identity=27.027027027027, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17508651, Length=198, Percent_Identity=30.8080808080808, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=252, Percent_Identity=31.3492063492063, Blast_Score=98, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6322861, Length=196, Percent_Identity=31.6326530612245, Blast_Score=89, Evalue=8e-19, Organism=Drosophila melanogaster, GI24639444, Length=249, Percent_Identity=36.144578313253, Blast_Score=141, Evalue=4e-34, Organism=Drosophila melanogaster, GI23397609, Length=251, Percent_Identity=36.6533864541833, Blast_Score=132, Evalue=3e-31, Organism=Drosophila melanogaster, GI21355319, Length=247, Percent_Identity=33.1983805668016, Blast_Score=130, Evalue=7e-31, Organism=Drosophila melanogaster, GI28571526, Length=253, Percent_Identity=33.596837944664, Blast_Score=114, Evalue=8e-26, Organism=Drosophila melanogaster, GI21357041, Length=253, Percent_Identity=33.201581027668, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI24644339, Length=255, Percent_Identity=31.3725490196078, Blast_Score=104, Evalue=5e-23, Organism=Drosophila melanogaster, GI17737361, Length=236, Percent_Identity=32.6271186440678, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI18859837, Length=206, Percent_Identity=33.495145631068, Blast_Score=94, Evalue=8e-20, Organism=Drosophila melanogaster, GI24641232, Length=221, Percent_Identity=30.7692307692308, Blast_Score=87, Evalue=7e-18, Organism=Drosophila melanogaster, GI24644337, Length=231, Percent_Identity=31.6017316017316, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24643142, Length=245, Percent_Identity=28.5714285714286, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI221331218, Length=202, Percent_Identity=32.6732673267327, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24665243, Length=202, Percent_Identity=32.6732673267327, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI221331216, Length=202, Percent_Identity=32.6732673267327, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24665247, Length=202, Percent_Identity=32.6732673267327, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI28571387, Length=247, Percent_Identity=25.9109311740891, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI21357673, Length=193, Percent_Identity=28.4974093264249, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24648693, Length=205, Percent_Identity=28.2926829268293, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI21355889, Length=205, Percent_Identity=28.2926829268293, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI116007234, Length=244, Percent_Identity=27.4590163934426, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.1.1.100 [C]
Molecular weight: Translated: 25244; Mature: 25244
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLKDRVAVVTGGAGPNGLGFATARMMAAQGATIIILDLSQADPAAAAARLGPQHMGLVA CCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCHHHCCEEE DVTNKASCDTAVAAVLDAKGRIDILVNNAGITQPRKTLDISPEDYDAVLDVSLRGTLVAS ECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCCCCCEEEEEEECCEEEEH QAVLPTMLAQKQGSIVCISSVSAQRGGGILGGPHYSAAKAGVLGLARAMAREYGGQGIRV HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE NCVTPGLIATDINKGKIPDDKRQAILDGIPLGYIGAPDDVAGCVVFLASDLSGYCTGITL EEECCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE DVNGGMLIH ECCCCEEEC >Mature Secondary Structure MLLKDRVAVVTGGAGPNGLGFATARMMAAQGATIIILDLSQADPAAAAARLGPQHMGLVA CCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCHHHCCEEE DVTNKASCDTAVAAVLDAKGRIDILVNNAGITQPRKTLDISPEDYDAVLDVSLRGTLVAS ECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCCCCCEEEEEEECCEEEEH QAVLPTMLAQKQGSIVCISSVSAQRGGGILGGPHYSAAKAGVLGLARAMAREYGGQGIRV HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE NCVTPGLIATDINKGKIPDDKRQAILDGIPLGYIGAPDDVAGCVVFLASDLSGYCTGITL EEECCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE DVNGGMLIH ECCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NADPH [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Oxoacyl-[acyl-carrier-protein]; NADPH; D-3-hydroxy-acyl-ACP; NADP [C]
Specific reaction: Oxoacyl-[acyl-carrier-protein] + NADPH = (3R)-hydroxyacyl-[acyl-carrier-protein] + NADP+ D-3-hydroxy-acyl-ACP + NADP = NADPH + Proton + beta-ketoacyl-ACP [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]