| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is qseC [H]
Identifier: 91787345
GI number: 91787345
Start: 1501388
End: 1502710
Strand: Direct
Name: qseC [H]
Synonym: Bpro_1451
Alternate gene names: 91787345
Gene position: 1501388-1502710 (Clockwise)
Preceding gene: 91787344
Following gene: 91787346
Centisome position: 28.87
GC content: 67.8
Gene sequence:
>1323_bases ATGGCGCTGGTGACGGCGGCCAGCCTGTGGCTGACCCGTGCCGATGCCGTGGCGTCAGCCAATGCGGCCTACGACCGCTC GCTGCTCGGGGCCATCAAGGCACTGGACCTGAATGTCTCGACGGCCTCGGGCGGCTTGTCGGTTGAGCTCCCCTACCGCC TGTTCGAATTTTTCCAGCTCACGGCGACGGGAAACGTCTATTTCAGGGTGGCCACGGCCGACAGCCTGGTGGAAATCGGC AATCCCGACCTGCCGCCGCCGCCATCGGCCTTGCGCGCAGGCCAGCCGATGTTCTACGACGCCATCTATTTTGACGAGTC GGTGCGTGTGGGCGCTTTCATGCGGCCACTGGAGCAGCCCCTGAACGCAAGCAGTGATCCGCAACTGGTGATCCAGGTCG CGGAGAGCACGTCGTCGCGCGAGCAATTCACCGCCAGTTTCGTGCGGCGAGCTGCCTGGCGCGACCTGCTGCTGCTGGTC GTGATGGGGTTGGCGGTGGTGATCGGGCTGACGGTGGCCCTGCGACCGATGACGCGCCTGGCCACGCAAACGCGGGCCCG GGAGCCCGACGACCTGCGCCCTTTGCAAGCGGCTGATCTGCCCCACGACATCCGGCCGCTGGTGGAGGCCGTCAACCAGC AGATGGCGCGTACCGAGCAGCTGGTGGCCGAACGCCGGGGCTTTATCGATGATGCCTCGCACCAGCTTCGCACTCCCTTG ACCATTCTGCGCGCCCAGCTCGACTATGTGCTGCGCGAGCCCGACCCGGCGCGGCGGCAACTGGCGCTGCAGGCACTGTC CGAAGAACTGGGCAATGCCATCCGTGCCACCAACCAGCTGCTGACCCTGGCTCGCAGTGACGCGGCCACGCCGCAAAGGG AAAGGTTTGACCTGGGTGAATTGGCGCGGGAGGTGGCGCTGGAGTTGCTGCCGCTGGCGCGGGCACGCGGCATCGATTTT GGCGTGGAAGTGCAGGCCGAAGCGCTTGAGGCCGAGGGCGACCGCAGCCTGCTGCAGCAGGCCCTGCTCAATATCGCCCA CAACGCGATCCAGCATGGCCGCGAACAGGGCACGGTCACGCTGCAGGCGGCGGCCGACGCGCTGGGCTTCAGCCTGCAGG TCGTCGACGACGGCGGCGGCATTGACCCCGAGGTGCTGGATCGAATCGGCCAGCGTTTTGTCAAAAGCCGGGGCAGCCGG GGCTCCGGCCTGGGGCTGGCGATTGCCCGCTCGGTGGCCGAGCGCCACGGCGGCCGGCTGCGCATTGAGCCGACGCCGGC AGCGGATGGCACCTGTGTGGCACTGTGGTGGCCCCGATCATGA
Upstream 100 bases:
>100_bases GGCGTTCGCATTCAGACCTACCGGGGCTTGGGCTATGTACTGGAACTGGATTCGCCGGGCCAGCATTAGGGTCAGGCTGC TGGCCCTGCTGCTGCCCACA
Downstream 100 bases:
>100_bases AGCGCGTGTCCGTCCTGCTGAGCCTGCTGAGCTTTGTCGGTGCGCTGGCCCATGCAGGCGCGCTGGAGGGAGCGCGCTGC ATCGCGCCTGCCAAGCCGGG
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MALVTAASLWLTRADAVASANAAYDRSLLGAIKALDLNVSTASGGLSVELPYRLFEFFQLTATGNVYFRVATADSLVEIG NPDLPPPPSALRAGQPMFYDAIYFDESVRVGAFMRPLEQPLNASSDPQLVIQVAESTSSREQFTASFVRRAAWRDLLLLV VMGLAVVIGLTVALRPMTRLATQTRAREPDDLRPLQAADLPHDIRPLVEAVNQQMARTEQLVAERRGFIDDASHQLRTPL TILRAQLDYVLREPDPARRQLALQALSEELGNAIRATNQLLTLARSDAATPQRERFDLGELAREVALELLPLARARGIDF GVEVQAEALEAEGDRSLLQQALLNIAHNAIQHGREQGTVTLQAAADALGFSLQVVDDGGGIDPEVLDRIGQRFVKSRGSR GSGLGLAIARSVAERHGGRLRIEPTPAADGTCVALWWPRS
Sequences:
>Translated_440_residues MALVTAASLWLTRADAVASANAAYDRSLLGAIKALDLNVSTASGGLSVELPYRLFEFFQLTATGNVYFRVATADSLVEIG NPDLPPPPSALRAGQPMFYDAIYFDESVRVGAFMRPLEQPLNASSDPQLVIQVAESTSSREQFTASFVRRAAWRDLLLLV VMGLAVVIGLTVALRPMTRLATQTRAREPDDLRPLQAADLPHDIRPLVEAVNQQMARTEQLVAERRGFIDDASHQLRTPL TILRAQLDYVLREPDPARRQLALQALSEELGNAIRATNQLLTLARSDAATPQRERFDLGELAREVALELLPLARARGIDF GVEVQAEALEAEGDRSLLQQALLNIAHNAIQHGREQGTVTLQAAADALGFSLQVVDDGGGIDPEVLDRIGQRFVKSRGSR GSGLGLAIARSVAERHGGRLRIEPTPAADGTCVALWWPRS >Mature_439_residues ALVTAASLWLTRADAVASANAAYDRSLLGAIKALDLNVSTASGGLSVELPYRLFEFFQLTATGNVYFRVATADSLVEIGN PDLPPPPSALRAGQPMFYDAIYFDESVRVGAFMRPLEQPLNASSDPQLVIQVAESTSSREQFTASFVRRAAWRDLLLLVV MGLAVVIGLTVALRPMTRLATQTRAREPDDLRPLQAADLPHDIRPLVEAVNQQMARTEQLVAERRGFIDDASHQLRTPLT ILRAQLDYVLREPDPARRQLALQALSEELGNAIRATNQLLTLARSDAATPQRERFDLGELAREVALELLPLARARGIDFG VEVQAEALEAEGDRSLLQQALLNIAHNAIQHGREQGTVTLQAAADALGFSLQVVDDGGGIDPEVLDRIGQRFVKSRGSRG SGLGLAIARSVAERHGGRLRIEPTPAADGTCVALWWPRS
Specific function: Member of a two-component regulatory system qseB/qseC. May activate qseB by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1789403, Length=300, Percent_Identity=33, Blast_Score=139, Evalue=5e-34, Organism=Escherichia coli, GI1786600, Length=241, Percent_Identity=32.3651452282158, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1788279, Length=299, Percent_Identity=29.0969899665552, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1788393, Length=272, Percent_Identity=27.5735294117647, Blast_Score=85, Evalue=8e-18, Organism=Escherichia coli, GI1786783, Length=304, Percent_Identity=25.9868421052632, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1790436, Length=227, Percent_Identity=28.1938325991189, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1790551, Length=262, Percent_Identity=25.5725190839695, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1790346, Length=235, Percent_Identity=27.2340425531915, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1788549, Length=221, Percent_Identity=27.1493212669683, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790861, Length=300, Percent_Identity=29, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1786912, Length=226, Percent_Identity=27.8761061946903, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1789808, Length=245, Percent_Identity=27.3469387755102, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1787894, Length=240, Percent_Identity=29.5833333333333, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI87082128, Length=301, Percent_Identity=26.2458471760797, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI145693157, Length=224, Percent_Identity=24.5535714285714, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI87081816, Length=107, Percent_Identity=37.3831775700935, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 47811; Mature: 47680
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALVTAASLWLTRADAVASANAAYDRSLLGAIKALDLNVSTASGGLSVELPYRLFEFFQL CCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEECCCCEEEECHHHHHHHHHH TATGNVYFRVATADSLVEIGNPDLPPPPSALRAGQPMFYDAIYFDESVRVGAFMRPLEQP EECCCEEEEEECCHHHHCCCCCCCCCCCHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHH LNASSDPQLVIQVAESTSSREQFTASFVRRAAWRDLLLLVVMGLAVVIGLTVALRPMTRL CCCCCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATQTRAREPDDLRPLQAADLPHDIRPLVEAVNQQMARTEQLVAERRGFIDDASHQLRTPL HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH TILRAQLDYVLREPDPARRQLALQALSEELGNAIRATNQLLTLARSDAATPQRERFDLGE HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHH LAREVALELLPLARARGIDFGVEVQAEALEAEGDRSLLQQALLNIAHNAIQHGREQGTVT HHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE LQAAADALGFSLQVVDDGGGIDPEVLDRIGQRFVKSRGSRGSGLGLAIARSVAERHGGRL EEEHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEE RIEPTPAADGTCVALWWPRS EECCCCCCCCCEEEEECCCC >Mature Secondary Structure ALVTAASLWLTRADAVASANAAYDRSLLGAIKALDLNVSTASGGLSVELPYRLFEFFQL CEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEECCCCEEEECHHHHHHHHHH TATGNVYFRVATADSLVEIGNPDLPPPPSALRAGQPMFYDAIYFDESVRVGAFMRPLEQP EECCCEEEEEECCHHHHCCCCCCCCCCCHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHH LNASSDPQLVIQVAESTSSREQFTASFVRRAAWRDLLLLVVMGLAVVIGLTVALRPMTRL CCCCCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATQTRAREPDDLRPLQAADLPHDIRPLVEAVNQQMARTEQLVAERRGFIDDASHQLRTPL HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH TILRAQLDYVLREPDPARRQLALQALSEELGNAIRATNQLLTLARSDAATPQRERFDLGE HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHH LAREVALELLPLARARGIDFGVEVQAEALEAEGDRSLLQQALLNIAHNAIQHGREQGTVT HHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE LQAAADALGFSLQVVDDGGGIDPEVLDRIGQRFVKSRGSRGSGLGLAIARSVAERHGGRL EEEHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEE RIEPTPAADGTCVALWWPRS EECCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]