Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is qseC [H]

Identifier: 91787345

GI number: 91787345

Start: 1501388

End: 1502710

Strand: Direct

Name: qseC [H]

Synonym: Bpro_1451

Alternate gene names: 91787345

Gene position: 1501388-1502710 (Clockwise)

Preceding gene: 91787344

Following gene: 91787346

Centisome position: 28.87

GC content: 67.8

Gene sequence:

>1323_bases
ATGGCGCTGGTGACGGCGGCCAGCCTGTGGCTGACCCGTGCCGATGCCGTGGCGTCAGCCAATGCGGCCTACGACCGCTC
GCTGCTCGGGGCCATCAAGGCACTGGACCTGAATGTCTCGACGGCCTCGGGCGGCTTGTCGGTTGAGCTCCCCTACCGCC
TGTTCGAATTTTTCCAGCTCACGGCGACGGGAAACGTCTATTTCAGGGTGGCCACGGCCGACAGCCTGGTGGAAATCGGC
AATCCCGACCTGCCGCCGCCGCCATCGGCCTTGCGCGCAGGCCAGCCGATGTTCTACGACGCCATCTATTTTGACGAGTC
GGTGCGTGTGGGCGCTTTCATGCGGCCACTGGAGCAGCCCCTGAACGCAAGCAGTGATCCGCAACTGGTGATCCAGGTCG
CGGAGAGCACGTCGTCGCGCGAGCAATTCACCGCCAGTTTCGTGCGGCGAGCTGCCTGGCGCGACCTGCTGCTGCTGGTC
GTGATGGGGTTGGCGGTGGTGATCGGGCTGACGGTGGCCCTGCGACCGATGACGCGCCTGGCCACGCAAACGCGGGCCCG
GGAGCCCGACGACCTGCGCCCTTTGCAAGCGGCTGATCTGCCCCACGACATCCGGCCGCTGGTGGAGGCCGTCAACCAGC
AGATGGCGCGTACCGAGCAGCTGGTGGCCGAACGCCGGGGCTTTATCGATGATGCCTCGCACCAGCTTCGCACTCCCTTG
ACCATTCTGCGCGCCCAGCTCGACTATGTGCTGCGCGAGCCCGACCCGGCGCGGCGGCAACTGGCGCTGCAGGCACTGTC
CGAAGAACTGGGCAATGCCATCCGTGCCACCAACCAGCTGCTGACCCTGGCTCGCAGTGACGCGGCCACGCCGCAAAGGG
AAAGGTTTGACCTGGGTGAATTGGCGCGGGAGGTGGCGCTGGAGTTGCTGCCGCTGGCGCGGGCACGCGGCATCGATTTT
GGCGTGGAAGTGCAGGCCGAAGCGCTTGAGGCCGAGGGCGACCGCAGCCTGCTGCAGCAGGCCCTGCTCAATATCGCCCA
CAACGCGATCCAGCATGGCCGCGAACAGGGCACGGTCACGCTGCAGGCGGCGGCCGACGCGCTGGGCTTCAGCCTGCAGG
TCGTCGACGACGGCGGCGGCATTGACCCCGAGGTGCTGGATCGAATCGGCCAGCGTTTTGTCAAAAGCCGGGGCAGCCGG
GGCTCCGGCCTGGGGCTGGCGATTGCCCGCTCGGTGGCCGAGCGCCACGGCGGCCGGCTGCGCATTGAGCCGACGCCGGC
AGCGGATGGCACCTGTGTGGCACTGTGGTGGCCCCGATCATGA

Upstream 100 bases:

>100_bases
GGCGTTCGCATTCAGACCTACCGGGGCTTGGGCTATGTACTGGAACTGGATTCGCCGGGCCAGCATTAGGGTCAGGCTGC
TGGCCCTGCTGCTGCCCACA

Downstream 100 bases:

>100_bases
AGCGCGTGTCCGTCCTGCTGAGCCTGCTGAGCTTTGTCGGTGCGCTGGCCCATGCAGGCGCGCTGGAGGGAGCGCGCTGC
ATCGCGCCTGCCAAGCCGGG

Product: histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MALVTAASLWLTRADAVASANAAYDRSLLGAIKALDLNVSTASGGLSVELPYRLFEFFQLTATGNVYFRVATADSLVEIG
NPDLPPPPSALRAGQPMFYDAIYFDESVRVGAFMRPLEQPLNASSDPQLVIQVAESTSSREQFTASFVRRAAWRDLLLLV
VMGLAVVIGLTVALRPMTRLATQTRAREPDDLRPLQAADLPHDIRPLVEAVNQQMARTEQLVAERRGFIDDASHQLRTPL
TILRAQLDYVLREPDPARRQLALQALSEELGNAIRATNQLLTLARSDAATPQRERFDLGELAREVALELLPLARARGIDF
GVEVQAEALEAEGDRSLLQQALLNIAHNAIQHGREQGTVTLQAAADALGFSLQVVDDGGGIDPEVLDRIGQRFVKSRGSR
GSGLGLAIARSVAERHGGRLRIEPTPAADGTCVALWWPRS

Sequences:

>Translated_440_residues
MALVTAASLWLTRADAVASANAAYDRSLLGAIKALDLNVSTASGGLSVELPYRLFEFFQLTATGNVYFRVATADSLVEIG
NPDLPPPPSALRAGQPMFYDAIYFDESVRVGAFMRPLEQPLNASSDPQLVIQVAESTSSREQFTASFVRRAAWRDLLLLV
VMGLAVVIGLTVALRPMTRLATQTRAREPDDLRPLQAADLPHDIRPLVEAVNQQMARTEQLVAERRGFIDDASHQLRTPL
TILRAQLDYVLREPDPARRQLALQALSEELGNAIRATNQLLTLARSDAATPQRERFDLGELAREVALELLPLARARGIDF
GVEVQAEALEAEGDRSLLQQALLNIAHNAIQHGREQGTVTLQAAADALGFSLQVVDDGGGIDPEVLDRIGQRFVKSRGSR
GSGLGLAIARSVAERHGGRLRIEPTPAADGTCVALWWPRS
>Mature_439_residues
ALVTAASLWLTRADAVASANAAYDRSLLGAIKALDLNVSTASGGLSVELPYRLFEFFQLTATGNVYFRVATADSLVEIGN
PDLPPPPSALRAGQPMFYDAIYFDESVRVGAFMRPLEQPLNASSDPQLVIQVAESTSSREQFTASFVRRAAWRDLLLLVV
MGLAVVIGLTVALRPMTRLATQTRAREPDDLRPLQAADLPHDIRPLVEAVNQQMARTEQLVAERRGFIDDASHQLRTPLT
ILRAQLDYVLREPDPARRQLALQALSEELGNAIRATNQLLTLARSDAATPQRERFDLGELAREVALELLPLARARGIDFG
VEVQAEALEAEGDRSLLQQALLNIAHNAIQHGREQGTVTLQAAADALGFSLQVVDDGGGIDPEVLDRIGQRFVKSRGSRG
SGLGLAIARSVAERHGGRLRIEPTPAADGTCVALWWPRS

Specific function: Member of a two-component regulatory system qseB/qseC. May activate qseB by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=300, Percent_Identity=33, Blast_Score=139, Evalue=5e-34,
Organism=Escherichia coli, GI1786600, Length=241, Percent_Identity=32.3651452282158, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1788279, Length=299, Percent_Identity=29.0969899665552, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1788393, Length=272, Percent_Identity=27.5735294117647, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI1786783, Length=304, Percent_Identity=25.9868421052632, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1790436, Length=227, Percent_Identity=28.1938325991189, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1790551, Length=262, Percent_Identity=25.5725190839695, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1790346, Length=235, Percent_Identity=27.2340425531915, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788549, Length=221, Percent_Identity=27.1493212669683, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1790861, Length=300, Percent_Identity=29, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1786912, Length=226, Percent_Identity=27.8761061946903, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1789808, Length=245, Percent_Identity=27.3469387755102, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1787894, Length=240, Percent_Identity=29.5833333333333, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87082128, Length=301, Percent_Identity=26.2458471760797, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI145693157, Length=224, Percent_Identity=24.5535714285714, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI87081816, Length=107, Percent_Identity=37.3831775700935, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 47811; Mature: 47680

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALVTAASLWLTRADAVASANAAYDRSLLGAIKALDLNVSTASGGLSVELPYRLFEFFQL
CCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEECCCCEEEECHHHHHHHHHH
TATGNVYFRVATADSLVEIGNPDLPPPPSALRAGQPMFYDAIYFDESVRVGAFMRPLEQP
EECCCEEEEEECCHHHHCCCCCCCCCCCHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHH
LNASSDPQLVIQVAESTSSREQFTASFVRRAAWRDLLLLVVMGLAVVIGLTVALRPMTRL
CCCCCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATQTRAREPDDLRPLQAADLPHDIRPLVEAVNQQMARTEQLVAERRGFIDDASHQLRTPL
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
TILRAQLDYVLREPDPARRQLALQALSEELGNAIRATNQLLTLARSDAATPQRERFDLGE
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHH
LAREVALELLPLARARGIDFGVEVQAEALEAEGDRSLLQQALLNIAHNAIQHGREQGTVT
HHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE
LQAAADALGFSLQVVDDGGGIDPEVLDRIGQRFVKSRGSRGSGLGLAIARSVAERHGGRL
EEEHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEE
RIEPTPAADGTCVALWWPRS
EECCCCCCCCCEEEEECCCC
>Mature Secondary Structure 
ALVTAASLWLTRADAVASANAAYDRSLLGAIKALDLNVSTASGGLSVELPYRLFEFFQL
CEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEECCCCEEEECHHHHHHHHHH
TATGNVYFRVATADSLVEIGNPDLPPPPSALRAGQPMFYDAIYFDESVRVGAFMRPLEQP
EECCCEEEEEECCHHHHCCCCCCCCCCCHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHH
LNASSDPQLVIQVAESTSSREQFTASFVRRAAWRDLLLLVVMGLAVVIGLTVALRPMTRL
CCCCCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATQTRAREPDDLRPLQAADLPHDIRPLVEAVNQQMARTEQLVAERRGFIDDASHQLRTPL
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
TILRAQLDYVLREPDPARRQLALQALSEELGNAIRATNQLLTLARSDAATPQRERFDLGE
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHH
LAREVALELLPLARARGIDFGVEVQAEALEAEGDRSLLQQALLNIAHNAIQHGREQGTVT
HHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE
LQAAADALGFSLQVVDDGGGIDPEVLDRIGQRFVKSRGSRGSGLGLAIARSVAERHGGRL
EEEHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEE
RIEPTPAADGTCVALWWPRS
EECCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]