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The map label for this gene is tctD [H]

Identifier: 91787344

GI number: 91787344

Start: 1500676

End: 1501356

Strand: Direct

Name: tctD [H]

Synonym: Bpro_1450

Alternate gene names: 91787344

Gene position: 1500676-1501356 (Clockwise)

Preceding gene: 91787342

Following gene: 91787345

Centisome position: 28.86

GC content: 66.52

Gene sequence:

>681_bases
ATGCGAATCCTGTTGGCTGAAGATGAGCACGCCCTGGGCGAGTGGCTGACCAAGGCACTTGAACAAAGCGGTAACCGCGT
GGACTGGCGCGACGACGGCCGCCTGGTGGAGCGTGCGCTGGTGGATCACGACTACGACGCGGTGGTGCTTGATCTCGGTC
TGCCCGGCCGCAGCGGCGATGAGATCCTGCGCCGACTGCGCGCCCAGGACAAACGCTTGCCGGTCCTGATACTGACCGCC
CGTGACTCGCTCGCCGACCGGGTCAACGCGCTCAACGAGGGCGCGGATGATTTTCTGGCCAAGCCGTTTGCGCTGGCCGA
ACTGGAAGCCCGGCTGACCGCGCTGGTGCGCCGCGCCCGCGGCAGCGAACATCCGCGCTTTGCCTGCGGCCCGCTGCTGT
TCGACACCGTGTCGCGCCAGTTCACCCTTGGCTCGGAGAACCTGCCGCTTTCGCCGCGCGAGCATGCGCTGCTCAAGGCG
CTGATCCAGCGCAGCGGCGAGCCGCTGTCGCGCCAGCAGGTAATGGACCGCGTGTTCAGCGACGAGGAAGACGTGCAGCC
CAGCGTGATCGACGTACTGGTGCACCGGCTGCGCAAGCGGCTTGACCACAGCGGCGTTCGCATTCAGACCTACCGGGGCT
TGGGCTATGTACTGGAACTGGATTCGCCGGGCCAGCATTAG

Upstream 100 bases:

>100_bases
TGTCTCCTGGAATTTTGGGAAATGGGGTCGCTATCGTGCCCTGACGAACCTAACAATTGCCTTTCAGTCCTGCCGCGCGG
TGGACACGATAATCCCTGAC

Downstream 100 bases:

>100_bases
GGTCAGGCTGCTGGCCCTGCTGCTGCCCACAATGGCGCTGGTGACGGCGGCCAGCCTGTGGCTGACCCGTGCCGATGCCG
TGGCGTCAGCCAATGCGGCC

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MRILLAEDEHALGEWLTKALEQSGNRVDWRDDGRLVERALVDHDYDAVVLDLGLPGRSGDEILRRLRAQDKRLPVLILTA
RDSLADRVNALNEGADDFLAKPFALAELEARLTALVRRARGSEHPRFACGPLLFDTVSRQFTLGSENLPLSPREHALLKA
LIQRSGEPLSRQQVMDRVFSDEEDVQPSVIDVLVHRLRKRLDHSGVRIQTYRGLGYVLELDSPGQH

Sequences:

>Translated_226_residues
MRILLAEDEHALGEWLTKALEQSGNRVDWRDDGRLVERALVDHDYDAVVLDLGLPGRSGDEILRRLRAQDKRLPVLILTA
RDSLADRVNALNEGADDFLAKPFALAELEARLTALVRRARGSEHPRFACGPLLFDTVSRQFTLGSENLPLSPREHALLKA
LIQRSGEPLSRQQVMDRVFSDEEDVQPSVIDVLVHRLRKRLDHSGVRIQTYRGLGYVLELDSPGQH
>Mature_226_residues
MRILLAEDEHALGEWLTKALEQSGNRVDWRDDGRLVERALVDHDYDAVVLDLGLPGRSGDEILRRLRAQDKRLPVLILTA
RDSLADRVNALNEGADDFLAKPFALAELEARLTALVRRARGSEHPRFACGPLLFDTVSRQFTLGSENLPLSPREHALLKA
LIQRSGEPLSRQQVMDRVFSDEEDVQPSVIDVLVHRLRKRLDHSGVRIQTYRGLGYVLELDSPGQH

Specific function: Transcriptional activator of the tctI tricarboxylate transport system operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=218, Percent_Identity=44.954128440367, Blast_Score=174, Evalue=3e-45,
Organism=Escherichia coli, GI1790552, Length=218, Percent_Identity=39.4495412844037, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI1786784, Length=223, Percent_Identity=39.9103139013453, Blast_Score=151, Evalue=4e-38,
Organism=Escherichia coli, GI1787375, Length=222, Percent_Identity=35.5855855855856, Blast_Score=142, Evalue=1e-35,
Organism=Escherichia coli, GI87082012, Length=218, Percent_Identity=36.697247706422, Blast_Score=127, Evalue=4e-31,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=34.8017621145374, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1790860, Length=221, Percent_Identity=35.7466063348416, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1786911, Length=222, Percent_Identity=33.3333333333333, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1786599, Length=220, Percent_Identity=34.0909090909091, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI1788394, Length=226, Percent_Identity=30.9734513274336, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=31.140350877193, Blast_Score=80, Evalue=8e-17,
Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=28.1385281385281, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790863, Length=229, Percent_Identity=28.82096069869, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1787229, Length=228, Percent_Identity=28.9473684210526, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=32.7102803738318, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25506; Mature: 25506

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLAEDEHALGEWLTKALEQSGNRVDWRDDGRLVERALVDHDYDAVVLDLGLPGRSGD
CEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHH
EILRRLRAQDKRLPVLILTARDSLADRVNALNEGADDFLAKPFALAELEARLTALVRRAR
HHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHC
GSEHPRFACGPLLFDTVSRQFTLGSENLPLSPREHALLKALIQRSGEPLSRQQVMDRVFS
CCCCCCEEHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHC
DEEDVQPSVIDVLVHRLRKRLDHSGVRIQTYRGLGYVLELDSPGQH
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCC
>Mature Secondary Structure
MRILLAEDEHALGEWLTKALEQSGNRVDWRDDGRLVERALVDHDYDAVVLDLGLPGRSGD
CEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHH
EILRRLRAQDKRLPVLILTARDSLADRVNALNEGADDFLAKPFALAELEARLTALVRRAR
HHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHC
GSEHPRFACGPLLFDTVSRQFTLGSENLPLSPREHALLKALIQRSGEPLSRQQVMDRVFS
CCCCCCEEHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHC
DEEDVQPSVIDVLVHRLRKRLDHSGVRIQTYRGLGYVLELDSPGQH
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2666399; 11083839; 11677609 [H]