| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ureB
Identifier: 91787246
GI number: 91787246
Start: 1389142
End: 1389480
Strand: Reverse
Name: ureB
Synonym: Bpro_1351
Alternate gene names: 91787246
Gene position: 1389480-1389142 (Counterclockwise)
Preceding gene: 91787247
Following gene: 91787245
Centisome position: 26.72
GC content: 64.6
Gene sequence:
>339_bases ATGACACCCGGCGAACTGTTTACCGACGGCCCCGACCACGTCCTCAACGCAGGGCGACGCACGCTGACACTGGTCGTGCA AAACACCGCAGACCGGCCCATCCAGGTGGGTTCGCACTACCACTTTGCAGAAACCAATGCCGCACTGGGCTTTGACCGCC AGGCGGCGCACGGCATGCGGCTGAATATTGCCTCCGGCACGGCCGTGCGCTTTGAGCCGGGCCAGCAGCGCACGGTGGAA CTGGTGGACTATGCGGGCGAGCGCAAGGTGTTTGGCTTCCGGGGCCTGGTGCAGGGTGGCCTGGACGCATCCGGGCAGAG TCACAAGGAAACGACGTAA
Upstream 100 bases:
>100_bases CTGGGGGTTTCTGGCGGTTGCCGCGCTGACGGCGCTGGCCATCTGGATGTCCCGTGGCGGCAAATAAGCACAACAAGACA CAACAACCCTTGAGGCAGCC
Downstream 100 bases:
>100_bases TGGCAACCATTGGCAGACGCGCCTATGCGGAAATGTTTGGCCCCACCGCGGGTGACCGCCTGCGGCTGGCCGACACCGAC CTGGTGGTGGAGGTGGAAGC
Product: urease subunit beta
Products: NA
Alternate protein names: Urea amidohydrolase subunit beta
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MTPGELFTDGPDHVLNAGRRTLTLVVQNTADRPIQVGSHYHFAETNAALGFDRQAAHGMRLNIASGTAVRFEPGQQRTVE LVDYAGERKVFGFRGLVQGGLDASGQSHKETT
Sequences:
>Translated_112_residues MTPGELFTDGPDHVLNAGRRTLTLVVQNTADRPIQVGSHYHFAETNAALGFDRQAAHGMRLNIASGTAVRFEPGQQRTVE LVDYAGERKVFGFRGLVQGGLDASGQSHKETT >Mature_111_residues TPGELFTDGPDHVLNAGRRTLTLVVQNTADRPIQVGSHYHFAETNAALGFDRQAAHGMRLNIASGTAVRFEPGQQRTVEL VDYAGERKVFGFRGLVQGGLDASGQSHKETT
Specific function: Unknown
COG id: COG0832
COG function: function code E; Urea amidohydrolase (urease) beta subunit
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the urease beta subunit family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): URE2_POLSJ (Q12DU2)
Other databases:
- EMBL: CP000316 - RefSeq: YP_548198.1 - ProteinModelPortal: Q12DU2 - SMR: Q12DU2 - STRING: Q12DU2 - GeneID: 4011962 - GenomeReviews: CP000316_GR - KEGG: pol:Bpro_1351 - NMPDR: fig|296591.1.peg.1907 - eggNOG: COG0832 - HOGENOM: HBG365918 - OMA: RIVYGFN - ProtClustDB: PRK13203 - BioCyc: PSP296591:BPRO_1351-MONOMER - GO: GO:0005737 - HAMAP: MF_01954 - InterPro: IPR002019 - Gene3D: G3DSA:2.10.150.10 - TIGRFAMs: TIGR00192
Pfam domain/function: PF00699 Urease_beta; SSF51278 Urease_beta
EC number: =3.5.1.5
Molecular weight: Translated: 12122; Mature: 11990
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPGELFTDGPDHVLNAGRRTLTLVVQNTADRPIQVGSHYHFAETNAALGFDRQAAHGMR CCCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCEEECCEEEECCCCCCCCCCCCCCCCEE LNIASGTAVRFEPGQQRTVELVDYAGERKVFGFRGLVQGGLDASGQSHKETT EEECCCCEEEECCCCCCEEEEEECCCCCEEEECCCHHCCCCCCCCCCCCCCC >Mature Secondary Structure TPGELFTDGPDHVLNAGRRTLTLVVQNTADRPIQVGSHYHFAETNAALGFDRQAAHGMR CCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCEEECCEEEECCCCCCCCCCCCCCCCEE LNIASGTAVRFEPGQQRTVELVDYAGERKVFGFRGLVQGGLDASGQSHKETT EEECCCCEEEECCCCCCEEEEEECCCCCEEEECCCHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA