Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ureE

Identifier: 91787244

GI number: 91787244

Start: 1386653

End: 1387315

Strand: Reverse

Name: ureE

Synonym: Bpro_1349

Alternate gene names: 91787244

Gene position: 1387315-1386653 (Counterclockwise)

Preceding gene: 91787245

Following gene: 91787243

Centisome position: 26.68

GC content: 63.8

Gene sequence:

>663_bases
GTGATCCAGGTTTCCAAAGTCATTCCACAGGGCGCGGGTCTCGCGCCTGTTCTCGTCAAACGCGCATCGACCGTTGAACT
CGACTGGGACGTGCGCCAGAAAAGCCGCTTCGATGCGACCGATTCGCTGGGCCGCACGCTCGGCGTTTTTTTGCCGCGCG
GCACCCTGGTGCGTGGCGGCGATGTGCTGGTCGCCGAAGATGGTTCGATGATCAAGGTCATTGCCTCGCCGCAGCCGGTG
CTGCGCATCACGGCTTGCAGCGCACACGGTTCGCCGTTTGACCTGACCCGCGCGGCCTACCACCTCGGCAACCGCCATGT
GCCCATCGAACTCAAGCCCGATCACCTCAAGATCGAGCCCGACCATGTGCTCGCCGACATGCTGCGCGCCATGCATTTGA
TCGTCCATGAAGTCGAGGAAGCGTTTGAGCCGGAGGGCGGGGCTTACAGCGCCGGGGGCCATGGCCATGGTCATGATCAC
GGCAGCCACGAGCACAGCGCCCATGACCACGGCAAGCATGACCACGCGCCAGCTAAACCGGCCACAGCGGCAACCCCCGC
AGCCCATGTGCACGGGCCCGACTGCAACCACGGCCATGATCATGCGCATGAGGCCAAGCCGGCCACGATACAAATCCACA
AACGCCGGCCCGACAACCTCTAA

Upstream 100 bases:

>100_bases
TCATGGCCGCCCGGGCCAGCCGCTGGGTGGGTGTGCTGCGTTCAACCCTTGTTTACGCAGGGCTTGCCGCGCTGGCATAC
TCGTTTTTTTAAGGTTAAAC

Downstream 100 bases:

>100_bases
ACCCCCTAAACCCCCTAAACCCTCTGAGCCCTTTAAACCCCGTGGACATGCCAGCCTCCCCCGCAGCGCAACTGCCGGCA
GCCAGCCTGCTGCAGTTGAT

Product: urease accessory protein UreE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MIQVSKVIPQGAGLAPVLVKRASTVELDWDVRQKSRFDATDSLGRTLGVFLPRGTLVRGGDVLVAEDGSMIKVIASPQPV
LRITACSAHGSPFDLTRAAYHLGNRHVPIELKPDHLKIEPDHVLADMLRAMHLIVHEVEEAFEPEGGAYSAGGHGHGHDH
GSHEHSAHDHGKHDHAPAKPATAATPAAHVHGPDCNHGHDHAHEAKPATIQIHKRRPDNL

Sequences:

>Translated_220_residues
MIQVSKVIPQGAGLAPVLVKRASTVELDWDVRQKSRFDATDSLGRTLGVFLPRGTLVRGGDVLVAEDGSMIKVIASPQPV
LRITACSAHGSPFDLTRAAYHLGNRHVPIELKPDHLKIEPDHVLADMLRAMHLIVHEVEEAFEPEGGAYSAGGHGHGHDH
GSHEHSAHDHGKHDHAPAKPATAATPAAHVHGPDCNHGHDHAHEAKPATIQIHKRRPDNL
>Mature_220_residues
MIQVSKVIPQGAGLAPVLVKRASTVELDWDVRQKSRFDATDSLGRTLGVFLPRGTLVRGGDVLVAEDGSMIKVIASPQPV
LRITACSAHGSPFDLTRAAYHLGNRHVPIELKPDHLKIEPDHVLADMLRAMHLIVHEVEEAFEPEGGAYSAGGHGHGHDH
GSHEHSAHDHGKHDHAPAKPATAATPAAHVHGPDCNHGHDHAHEAKPATIQIHKRRPDNL

Specific function: Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly

COG id: COG2371

COG function: function code O; Urease accessory protein UreE

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureE family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UREE_POLSJ (Q12DU4)

Other databases:

- EMBL:   CP000316
- RefSeq:   YP_548196.1
- ProteinModelPortal:   Q12DU4
- SMR:   Q12DU4
- STRING:   Q12DU4
- GeneID:   4011960
- GenomeReviews:   CP000316_GR
- KEGG:   pol:Bpro_1349
- NMPDR:   fig|296591.1.peg.1909
- eggNOG:   COG2371
- HOGENOM:   HBG635302
- OMA:   KSRFDAT
- ProtClustDB:   PRK13263
- BioCyc:   PSP296591:BPRO_1349-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00822
- InterPro:   IPR012406
- InterPro:   IPR007864
- InterPro:   IPR004029
- Gene3D:   G3DSA:3.30.70.790
- PIRSF:   PIRSF036402

Pfam domain/function: PF05194 UreE_C; PF02814 UreE_N; SSF69737 UreE_C; SSF69287 UreE_N

EC number: NA

Molecular weight: Translated: 23694; Mature: 23694

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQVSKVIPQGAGLAPVLVKRASTVELDWDVRQKSRFDATDSLGRTLGVFLPRGTLVRGG
CEECCCCCCCCCCHHHHHHHCCCEEEECCCCHHHCCCCCHHHHHHHHEEEECCCEEEECC
DVLVAEDGSMIKVIASPQPVLRITACSAHGSPFDLTRAAYHLGNRHVPIELKPDHLKIEP
CEEEECCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEECCCCEEECH
DHVLADMLRAMHLIVHEVEEAFEPEGGAYSAGGHGHGHDHGSHEHSAHDHGKHDHAPAKP
HHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ATAATPAAHVHGPDCNHGHDHAHEAKPATIQIHKRRPDNL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MIQVSKVIPQGAGLAPVLVKRASTVELDWDVRQKSRFDATDSLGRTLGVFLPRGTLVRGG
CEECCCCCCCCCCHHHHHHHCCCEEEECCCCHHHCCCCCHHHHHHHHEEEECCCEEEECC
DVLVAEDGSMIKVIASPQPVLRITACSAHGSPFDLTRAAYHLGNRHVPIELKPDHLKIEP
CEEEECCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEECCCCEEECH
DHVLADMLRAMHLIVHEVEEAFEPEGGAYSAGGHGHGHDHGSHEHSAHDHGKHDHAPAKP
HHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ATAATPAAHVHGPDCNHGHDHAHEAKPATIQIHKRRPDNL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA