Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787109

Identifier: 91787109

GI number: 91787109

Start: 1255852

End: 1256919

Strand: Reverse

Name: 91787109

Synonym: Bpro_1212

Alternate gene names: NA

Gene position: 1256919-1255852 (Counterclockwise)

Preceding gene: 91787111

Following gene: 91787107

Centisome position: 24.17

GC content: 62.08

Gene sequence:

>1068_bases
ATGAGCGAGATTACACGAGTTGGCGTTGATCTGGCAAAGCGCGTCATTCAAGTTCACGCCGTTGACGGTGCTGGCCAGCG
GGTTACCAGTCGAGCGCTGGTGCGCGACAAGTTCATTACCTGGTGTGCTCAATTGCCCGCAGGCTGTATGGTTGCCATGG
AAGCCAGCTCCAGTGCCCACCACTGGGCTCGTCGGCTGGTGGCATCAGGGCTGGATGCGCGCATCATCGCCGCGCATTTG
GTGGCGCCCTACCGATTGCAGGGCAAGTCGGGTAAGAACGACGCCAACGATGCTGCCGCCATCTGCGAAGCCGCCTCGCG
CCCGCAAATGCATTTCGTGCCCGTCAAAACTGTCGATCAGCAAAGCATGCTGTGCATCCATCGCCTGCGTGAAGGCTTCA
AGGCCGAGCGCACTGCCTGCGTCAACCGGATTCGCGGTCTGCTGGCCGAGTTTGGTCTGGTGTTCGCCCAGAAGCCCGCC
GTGCTACGCCAGGCCTTACCCGATGTGATTGAAGACGCAAGCAACGAGTTGGGGGCCCTGGCCCGGCTTGCGTTGCAGCG
TGCCTGGGCGCAGTGGCAGGAACTCGATGCGCATCTGGCCTGGTGCGACGAACGCATTGCAGCCCACCTCAAGGGCAACG
AGCAGGTGCGCCAAGCTGAACAACTGATGGGCGTGGGACCGGTGACGGCCTCCGCCATCGTCGCGACGGTGGGAGACTTC
AAGCAGTTTCGGGACGGCGCGCAGTTTGGCGCCTGGCTGGGTTTGACGCCACGACAGAACTCCAGTGGAGGAAAGAACAG
CCTGGGCTCCATCACCAAGCGCGGCGACATGTATTTGCGCATGCTGTTGATTCAGGGTGCCAAGTCTGCCGTGATGACGG
CTCAGAAACGTTCCGACCCGATCTCCAAATGGGCACACCAGCTGCGCGAGAAATCGGGCTGGCAAAAGGCGGTGGTGGCC
CTGGCCAACAAGAACGCACGCATCCTGTGGGCGGTGTTCGTGCGGGGCAAACCGTTTGATGCGCGCCATGTAAGTGTCAA
GCCAGGCATGGCGGGCGCAGCGGCGTAG

Upstream 100 bases:

>100_bases
TGTAAAGAATACGAAGGGACTTCCCACTTCCGGGTAACGGCATCGAGTGCCAAGATTGGTTTTGGAAAGTCAATCTGAAA
CCTTTGGAAGGAGAAGTCCC

Downstream 100 bases:

>100_bases
CGCCGTCAAAAAAAAAGTTGTTCGTTTCCTTGCAAGACGTGAGTTCGAAGATGCAGTAAACAGGTCAGACCGGCAGCGGG
CAAGCTCGACTAACCCTTTG

Product: transposase IS116/IS110/IS902

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MSEITRVGVDLAKRVIQVHAVDGAGQRVTSRALVRDKFITWCAQLPAGCMVAMEASSSAHHWARRLVASGLDARIIAAHL
VAPYRLQGKSGKNDANDAAAICEAASRPQMHFVPVKTVDQQSMLCIHRLREGFKAERTACVNRIRGLLAEFGLVFAQKPA
VLRQALPDVIEDASNELGALARLALQRAWAQWQELDAHLAWCDERIAAHLKGNEQVRQAEQLMGVGPVTASAIVATVGDF
KQFRDGAQFGAWLGLTPRQNSSGGKNSLGSITKRGDMYLRMLLIQGAKSAVMTAQKRSDPISKWAHQLREKSGWQKAVVA
LANKNARILWAVFVRGKPFDARHVSVKPGMAGAAA

Sequences:

>Translated_355_residues
MSEITRVGVDLAKRVIQVHAVDGAGQRVTSRALVRDKFITWCAQLPAGCMVAMEASSSAHHWARRLVASGLDARIIAAHL
VAPYRLQGKSGKNDANDAAAICEAASRPQMHFVPVKTVDQQSMLCIHRLREGFKAERTACVNRIRGLLAEFGLVFAQKPA
VLRQALPDVIEDASNELGALARLALQRAWAQWQELDAHLAWCDERIAAHLKGNEQVRQAEQLMGVGPVTASAIVATVGDF
KQFRDGAQFGAWLGLTPRQNSSGGKNSLGSITKRGDMYLRMLLIQGAKSAVMTAQKRSDPISKWAHQLREKSGWQKAVVA
LANKNARILWAVFVRGKPFDARHVSVKPGMAGAAA
>Mature_354_residues
SEITRVGVDLAKRVIQVHAVDGAGQRVTSRALVRDKFITWCAQLPAGCMVAMEASSSAHHWARRLVASGLDARIIAAHLV
APYRLQGKSGKNDANDAAAICEAASRPQMHFVPVKTVDQQSMLCIHRLREGFKAERTACVNRIRGLLAEFGLVFAQKPAV
LRQALPDVIEDASNELGALARLALQRAWAQWQELDAHLAWCDERIAAHLKGNEQVRQAEQLMGVGPVTASAIVATVGDFK
QFRDGAQFGAWLGLTPRQNSSGGKNSLGSITKRGDMYLRMLLIQGAKSAVMTAQKRSDPISKWAHQLREKSGWQKAVVAL
ANKNARILWAVFVRGKPFDARHVSVKPGMAGAAA

Specific function: Required for the transposition of an insertion element (Potential) [H]

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 20 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 38618; Mature: 38487

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEITRVGVDLAKRVIQVHAVDGAGQRVTSRALVRDKFITWCAQLPAGCMVAMEASSSAH
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHH
HWARRLVASGLDARIIAAHLVAPYRLQGKSGKNDANDAAAICEAASRPQMHFVPVKTVDQ
HHHHHHHHCCCCHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCH
QSMLCIHRLREGFKAERTACVNRIRGLLAEFGLVFAQKPAVLRQALPDVIEDASNELGAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
ARLALQRAWAQWQELDAHLAWCDERIAAHLKGNEQVRQAEQLMGVGPVTASAIVATVGDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
KQFRDGAQFGAWLGLTPRQNSSGGKNSLGSITKRGDMYLRMLLIQGAKSAVMTAQKRSDP
HHHHCCHHHCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCH
ISKWAHQLREKSGWQKAVVALANKNARILWAVFVRGKPFDARHVSVKPGMAGAAA
HHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure 
SEITRVGVDLAKRVIQVHAVDGAGQRVTSRALVRDKFITWCAQLPAGCMVAMEASSSAH
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHH
HWARRLVASGLDARIIAAHLVAPYRLQGKSGKNDANDAAAICEAASRPQMHFVPVKTVDQ
HHHHHHHHCCCCHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCH
QSMLCIHRLREGFKAERTACVNRIRGLLAEFGLVFAQKPAVLRQALPDVIEDASNELGAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
ARLALQRAWAQWQELDAHLAWCDERIAAHLKGNEQVRQAEQLMGVGPVTASAIVATVGDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
KQFRDGAQFGAWLGLTPRQNSSGGKNSLGSITKRGDMYLRMLLIQGAKSAVMTAQKRSDP
HHHHCCHHHCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCH
ISKWAHQLREKSGWQKAVVALANKNARILWAVFVRGKPFDARHVSVKPGMAGAAA
HHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]