Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786952

Identifier: 91786952

GI number: 91786952

Start: 1079746

End: 1080672

Strand: Reverse

Name: 91786952

Synonym: Bpro_1053

Alternate gene names: NA

Gene position: 1080672-1079746 (Counterclockwise)

Preceding gene: 91786953

Following gene: 91786951

Centisome position: 20.78

GC content: 66.67

Gene sequence:

>927_bases
ATGAGCCCGGCATCCGCCAGCGACATGGCGACCCGCCTGCTTGCCGGACACGGCCTGTTCGACTTCCAGGGCATCCATCA
CCGGCCCGACTACTGTTGGCCAGAAGGGCGGCGCCTGGCGGTCTACCTGGGCTTTAACCTGGAACATTTCGCATTTGGCG
AGGGCCTGGGTGCCAACCTCGGTCCGGCCTCGCCGCAACCTGACGTGCTGAACTACGCCTGGCGGGAGTATGGGAACCGG
GTGGGCGCGTGGCGTTGCCTGGAGCTGTTTGACGCGCTGGGCCTGCCGACGGGCACGCTCATCAACACCGCGCTGTATGA
CCACTGCCCCGAACTGGTCGCAGCATTCGCAGCCCGCGGCGATGAACTGATAGGCCACGGCCACACCAATGCCGAGCGCC
AGGCTGACATGGCCGAGCCGCAGGAGCGTGAATTGCTCGCGGCGTGCCGGGCGCGCATTGCCCAGCGCAGCGGCACGGCG
CCTGCCGGCTGGCTGTCGCCCTGGATTTCCGAAAGCCGGGCAACACCGCACCTGCTGGCGGAAACCGGCTACCGCTACAC
CCTGAACTGGTGCCATGACGACCAGCCGGTGCGCCTGCGCACCCGCGGCGGGCCGCTGTGGTCCATCCCCTACCCGCAGG
AGCTCAATGACATTCCGATGATCATCGCGCGCCAGATGGACGGCAAGGATTTCGCGCAGATGGTGATAGACAACGTGGAT
GAAATGCTGGAGCAGTCCACACGCCAGGCGCTGGTGATGGGCATTGCCCTGCACCCCTACATCGTCGGTCAGCCCTACCG
CCTGCGCCATCTGCGCCGGGCGCTGGAACATCTGGCGCGCCTGCGCGATGAAGGCCGCATCTGGTTCACCACGCCCGGCG
CCATCTGCGCCCACATGAACGAGGTTTTCCCCGGAGCAGCCGCATGA

Upstream 100 bases:

>100_bases
GTCCAAACCAAAACCAGGCAGCCAGGCACAGAATCCGTGCAGCAGCCCACACCAAGCCGCGGCATGGAAGTCTGGGCTCC
TGCACCGGGAGCCTGTACCG

Downstream 100 bases:

>100_bases
GTACCGCCAGGAAACGCGCACCCGCGCCCGCCACCGGCATGCCGGCCGACGCCGCCGCTCCCCTGCTGCCCGGCCTGTCG
GAGACGGAAAGCCGCATCTA

Product: hypothetical protein

Products: NA

Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitooligosaccharide Deacetylase; Xylanase/Chitin Deacetylase; Chitin Deacetylase; Polysaccharide Deacetylase Family; Polysaccharide Deacetylase Domain Protein; Deacetylase Protein

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MSPASASDMATRLLAGHGLFDFQGIHHRPDYCWPEGRRLAVYLGFNLEHFAFGEGLGANLGPASPQPDVLNYAWREYGNR
VGAWRCLELFDALGLPTGTLINTALYDHCPELVAAFAARGDELIGHGHTNAERQADMAEPQERELLAACRARIAQRSGTA
PAGWLSPWISESRATPHLLAETGYRYTLNWCHDDQPVRLRTRGGPLWSIPYPQELNDIPMIIARQMDGKDFAQMVIDNVD
EMLEQSTRQALVMGIALHPYIVGQPYRLRHLRRALEHLARLRDEGRIWFTTPGAICAHMNEVFPGAAA

Sequences:

>Translated_308_residues
MSPASASDMATRLLAGHGLFDFQGIHHRPDYCWPEGRRLAVYLGFNLEHFAFGEGLGANLGPASPQPDVLNYAWREYGNR
VGAWRCLELFDALGLPTGTLINTALYDHCPELVAAFAARGDELIGHGHTNAERQADMAEPQERELLAACRARIAQRSGTA
PAGWLSPWISESRATPHLLAETGYRYTLNWCHDDQPVRLRTRGGPLWSIPYPQELNDIPMIIARQMDGKDFAQMVIDNVD
EMLEQSTRQALVMGIALHPYIVGQPYRLRHLRRALEHLARLRDEGRIWFTTPGAICAHMNEVFPGAAA
>Mature_307_residues
SPASASDMATRLLAGHGLFDFQGIHHRPDYCWPEGRRLAVYLGFNLEHFAFGEGLGANLGPASPQPDVLNYAWREYGNRV
GAWRCLELFDALGLPTGTLINTALYDHCPELVAAFAARGDELIGHGHTNAERQADMAEPQERELLAACRARIAQRSGTAP
AGWLSPWISESRATPHLLAETGYRYTLNWCHDDQPVRLRTRGGPLWSIPYPQELNDIPMIIARQMDGKDFAQMVIDNVDE
MLEQSTRQALVMGIALHPYIVGQPYRLRHLRRALEHLARLRDEGRIWFTTPGAICAHMNEVFPGAAA

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34401; Mature: 34270

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPASASDMATRLLAGHGLFDFQGIHHRPDYCWPEGRRLAVYLGFNLEHFAFGEGLGANL
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHCCCCCCCCCC
GPASPQPDVLNYAWREYGNRVGAWRCLELFDALGLPTGTLINTALYDHCPELVAAFAARG
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
DELIGHGHTNAERQADMAEPQERELLAACRARIAQRSGTAPAGWLSPWISESRATPHLLA
CHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHH
ETGYRYTLNWCHDDQPVRLRTRGGPLWSIPYPQELNDIPMIIARQMDGKDFAQMVIDNVD
HCCCEEEEEEECCCCCEEEEECCCCEECCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHH
EMLEQSTRQALVMGIALHPYIVGQPYRLRHLRRALEHLARLRDEGRIWFTTPGAICAHMN
HHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHH
EVFPGAAA
HHCCCCCC
>Mature Secondary Structure 
SPASASDMATRLLAGHGLFDFQGIHHRPDYCWPEGRRLAVYLGFNLEHFAFGEGLGANL
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHCCCCCCCCCC
GPASPQPDVLNYAWREYGNRVGAWRCLELFDALGLPTGTLINTALYDHCPELVAAFAARG
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
DELIGHGHTNAERQADMAEPQERELLAACRARIAQRSGTAPAGWLSPWISESRATPHLLA
CHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHH
ETGYRYTLNWCHDDQPVRLRTRGGPLWSIPYPQELNDIPMIIARQMDGKDFAQMVIDNVD
HCCCEEEEEEECCCCCEEEEECCCCEECCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHH
EMLEQSTRQALVMGIALHPYIVGQPYRLRHLRRALEHLARLRDEGRIWFTTPGAICAHMN
HHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHH
EVFPGAAA
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA