| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786952
Identifier: 91786952
GI number: 91786952
Start: 1079746
End: 1080672
Strand: Reverse
Name: 91786952
Synonym: Bpro_1053
Alternate gene names: NA
Gene position: 1080672-1079746 (Counterclockwise)
Preceding gene: 91786953
Following gene: 91786951
Centisome position: 20.78
GC content: 66.67
Gene sequence:
>927_bases ATGAGCCCGGCATCCGCCAGCGACATGGCGACCCGCCTGCTTGCCGGACACGGCCTGTTCGACTTCCAGGGCATCCATCA CCGGCCCGACTACTGTTGGCCAGAAGGGCGGCGCCTGGCGGTCTACCTGGGCTTTAACCTGGAACATTTCGCATTTGGCG AGGGCCTGGGTGCCAACCTCGGTCCGGCCTCGCCGCAACCTGACGTGCTGAACTACGCCTGGCGGGAGTATGGGAACCGG GTGGGCGCGTGGCGTTGCCTGGAGCTGTTTGACGCGCTGGGCCTGCCGACGGGCACGCTCATCAACACCGCGCTGTATGA CCACTGCCCCGAACTGGTCGCAGCATTCGCAGCCCGCGGCGATGAACTGATAGGCCACGGCCACACCAATGCCGAGCGCC AGGCTGACATGGCCGAGCCGCAGGAGCGTGAATTGCTCGCGGCGTGCCGGGCGCGCATTGCCCAGCGCAGCGGCACGGCG CCTGCCGGCTGGCTGTCGCCCTGGATTTCCGAAAGCCGGGCAACACCGCACCTGCTGGCGGAAACCGGCTACCGCTACAC CCTGAACTGGTGCCATGACGACCAGCCGGTGCGCCTGCGCACCCGCGGCGGGCCGCTGTGGTCCATCCCCTACCCGCAGG AGCTCAATGACATTCCGATGATCATCGCGCGCCAGATGGACGGCAAGGATTTCGCGCAGATGGTGATAGACAACGTGGAT GAAATGCTGGAGCAGTCCACACGCCAGGCGCTGGTGATGGGCATTGCCCTGCACCCCTACATCGTCGGTCAGCCCTACCG CCTGCGCCATCTGCGCCGGGCGCTGGAACATCTGGCGCGCCTGCGCGATGAAGGCCGCATCTGGTTCACCACGCCCGGCG CCATCTGCGCCCACATGAACGAGGTTTTCCCCGGAGCAGCCGCATGA
Upstream 100 bases:
>100_bases GTCCAAACCAAAACCAGGCAGCCAGGCACAGAATCCGTGCAGCAGCCCACACCAAGCCGCGGCATGGAAGTCTGGGCTCC TGCACCGGGAGCCTGTACCG
Downstream 100 bases:
>100_bases GTACCGCCAGGAAACGCGCACCCGCGCCCGCCACCGGCATGCCGGCCGACGCCGCCGCTCCCCTGCTGCCCGGCCTGTCG GAGACGGAAAGCCGCATCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitooligosaccharide Deacetylase; Xylanase/Chitin Deacetylase; Chitin Deacetylase; Polysaccharide Deacetylase Family; Polysaccharide Deacetylase Domain Protein; Deacetylase Protein
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MSPASASDMATRLLAGHGLFDFQGIHHRPDYCWPEGRRLAVYLGFNLEHFAFGEGLGANLGPASPQPDVLNYAWREYGNR VGAWRCLELFDALGLPTGTLINTALYDHCPELVAAFAARGDELIGHGHTNAERQADMAEPQERELLAACRARIAQRSGTA PAGWLSPWISESRATPHLLAETGYRYTLNWCHDDQPVRLRTRGGPLWSIPYPQELNDIPMIIARQMDGKDFAQMVIDNVD EMLEQSTRQALVMGIALHPYIVGQPYRLRHLRRALEHLARLRDEGRIWFTTPGAICAHMNEVFPGAAA
Sequences:
>Translated_308_residues MSPASASDMATRLLAGHGLFDFQGIHHRPDYCWPEGRRLAVYLGFNLEHFAFGEGLGANLGPASPQPDVLNYAWREYGNR VGAWRCLELFDALGLPTGTLINTALYDHCPELVAAFAARGDELIGHGHTNAERQADMAEPQERELLAACRARIAQRSGTA PAGWLSPWISESRATPHLLAETGYRYTLNWCHDDQPVRLRTRGGPLWSIPYPQELNDIPMIIARQMDGKDFAQMVIDNVD EMLEQSTRQALVMGIALHPYIVGQPYRLRHLRRALEHLARLRDEGRIWFTTPGAICAHMNEVFPGAAA >Mature_307_residues SPASASDMATRLLAGHGLFDFQGIHHRPDYCWPEGRRLAVYLGFNLEHFAFGEGLGANLGPASPQPDVLNYAWREYGNRV GAWRCLELFDALGLPTGTLINTALYDHCPELVAAFAARGDELIGHGHTNAERQADMAEPQERELLAACRARIAQRSGTAP AGWLSPWISESRATPHLLAETGYRYTLNWCHDDQPVRLRTRGGPLWSIPYPQELNDIPMIIARQMDGKDFAQMVIDNVDE MLEQSTRQALVMGIALHPYIVGQPYRLRHLRRALEHLARLRDEGRIWFTTPGAICAHMNEVFPGAAA
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34401; Mature: 34270
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPASASDMATRLLAGHGLFDFQGIHHRPDYCWPEGRRLAVYLGFNLEHFAFGEGLGANL CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHCCCCCCCCCC GPASPQPDVLNYAWREYGNRVGAWRCLELFDALGLPTGTLINTALYDHCPELVAAFAARG CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC DELIGHGHTNAERQADMAEPQERELLAACRARIAQRSGTAPAGWLSPWISESRATPHLLA CHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHH ETGYRYTLNWCHDDQPVRLRTRGGPLWSIPYPQELNDIPMIIARQMDGKDFAQMVIDNVD HCCCEEEEEEECCCCCEEEEECCCCEECCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHH EMLEQSTRQALVMGIALHPYIVGQPYRLRHLRRALEHLARLRDEGRIWFTTPGAICAHMN HHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHH EVFPGAAA HHCCCCCC >Mature Secondary Structure SPASASDMATRLLAGHGLFDFQGIHHRPDYCWPEGRRLAVYLGFNLEHFAFGEGLGANL CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHCCCCCCCCCC GPASPQPDVLNYAWREYGNRVGAWRCLELFDALGLPTGTLINTALYDHCPELVAAFAARG CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC DELIGHGHTNAERQADMAEPQERELLAACRARIAQRSGTAPAGWLSPWISESRATPHLLA CHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHH ETGYRYTLNWCHDDQPVRLRTRGGPLWSIPYPQELNDIPMIIARQMDGKDFAQMVIDNVD HCCCEEEEEEECCCCCEEEEECCCCEECCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHH EMLEQSTRQALVMGIALHPYIVGQPYRLRHLRRALEHLARLRDEGRIWFTTPGAICAHMN HHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHH EVFPGAAA HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA