Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91786948

Identifier: 91786948

GI number: 91786948

Start: 1075151

End: 1076782

Strand: Reverse

Name: 91786948

Synonym: Bpro_1049

Alternate gene names: NA

Gene position: 1076782-1075151 (Counterclockwise)

Preceding gene: 91786949

Following gene: 91786946

Centisome position: 20.71

GC content: 65.87

Gene sequence:

>1632_bases
ATGATTCGCCTGACTGAACTCAAACTTCCGCTGGACCACGCGGAAGACGCCCTGCCGGCCCTGATGGCCCGCACGCTGGG
CATCGCCGCCTCCGATATCGCGACTTTCCAGGTCCACAAGCGCAGCTTTGACGCCCGCAAGGCGGAGCTGCTGCAGGTGT
ACATCGCCGATGTGGAACTGGCCCCCGCGCTGGAAGCTGCATTGCTCGCGAAGTTTGCCGGCCACCCGCACATCCTGCCC
TCACCCGACATGGCCTACCACCCGGTGGGCACGGCACCCCAAGGCCTGCCGCTGCGCCCGGTGGTGATCGGCTTTGGCCC
GTGCGGCATCTTTGCGGCCCTGCTGCTGGCGCAGATGGGCTTCAAGCCCATCGTGCTCGAGCGCGGCAAAACCGTGCGCC
AGCGCACCAAGGACACCTGGGGCCTGTGGCGCAAGAACGTGCTGAATCCGGAATCCAATGTGCAATTTGGCGAAGGCGGC
GCGGGAACATTTTCCGACGGCAAGCTCTACAGCCAGATCAAGGACCCGCGGCACCTCGGCCGCAAGGTCATGAACGAATT
TGTCAAGGCCGGGGCGCCTGCCGACATCCTCTACGAAGCCCATCCCCACATTGGCACCTTCAAACTGGTCAAGGTGGTGG
AAAACATGCGCGAGCAGATCATCGCGCTGGGCGGTGAAATACGCTTTGAGCAGCGCGTAACGGACGTGCTGATCGAGGTC
GGCCCCGGCGGCAAGCACCTGCGCGGCCTCACGGTGCAAAACCAGGCCACCGGAGAAACGCACGAGCTGCGCGCCGACCA
CGTCGTGATGGCGCTGGGCCACAGCTCGCGCGACACCTTTGCCATGCTCTACGCCCGCGGCGTGTACATCGAGGCCAAAC
CCTTTTCCATCGGCTTTCGCGTGGAGCACCCTCAGGGCATCATCGACCGCGCACGCTGGGGCCGGCATGCCAGCCACCCG
GCCCTGGGCGCTGCCGAATACAAGCTGGTGCACCACGCCAGCAATGGCCGCTCGGTCTACAGCTTTTGCATGTGCCCGGG
CGGCACGGTGGTGGCCGCTACCTCGGAGCCCGAACGTGTGGTGACCAACGGCATGAGCCAGTATTCGCGCAACGAGCGCA
ATGCCAACGCCGGCATCGTGGTGGGGATTGACCCGCGCGATTACCCGGGCGATGCGCTGGCCGGCATCGACCTGCAGCGC
CGGCTGGAGTCGCATGCCTATGTGCTGGGCGGCAGCAATTACCAGGCGCCGGCGCAGCTGGTCGGCGACTTTGTGGCGGG
CCGACCATCGACCGCGCTGGGCAGCATCACGCCCTCGTACAAGCCCGGCGTAACCATCGGTGATCTGTCGTCAGCCTTGC
CCGGCTACGCGATTGACGCCATGCGCGAAGCCTTTCCCGCCTTTGGCCGCAAGATCAAGGGCTTTGACACGCATGACGCC
GTGCTGACCGGCGTGGAGACGCGCACCTCCTCACCGATCAAGATCAGCCGCGGCGAAGACTTGCAAAGCCTCAATGTGCG
CGGCCTCTATCCCGCCGGCGAAGGCGCCAGCTACGCCGGCGGCATCCTGTCGGCGGGCGTGGACGGCATCAAGGTGGCCG
AGGCCGTGGCGCGCAACCTGCTGAGCGCCTGA

Upstream 100 bases:

>100_bases
GTCTGGCAGGCTTCACGGGGCCTATTATCCGTTATCCGCCAGCGCGGCGTATGACGGGGACCCTTTAAAATAAGGGCTGC
TTGATCAACACGAGCCCCTG

Downstream 100 bases:

>100_bases
TCAGCAGGCAGCCGCCTGGGCTACGGCCCGGTCGCCCGGCACGGCACGGCACGGCACGCGCGATGATGGTGCGCTGATTT
CAGACGGGCCTTCCTGCTTC

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MIRLTELKLPLDHAEDALPALMARTLGIAASDIATFQVHKRSFDARKAELLQVYIADVELAPALEAALLAKFAGHPHILP
SPDMAYHPVGTAPQGLPLRPVVIGFGPCGIFAALLLAQMGFKPIVLERGKTVRQRTKDTWGLWRKNVLNPESNVQFGEGG
AGTFSDGKLYSQIKDPRHLGRKVMNEFVKAGAPADILYEAHPHIGTFKLVKVVENMREQIIALGGEIRFEQRVTDVLIEV
GPGGKHLRGLTVQNQATGETHELRADHVVMALGHSSRDTFAMLYARGVYIEAKPFSIGFRVEHPQGIIDRARWGRHASHP
ALGAAEYKLVHHASNGRSVYSFCMCPGGTVVAATSEPERVVTNGMSQYSRNERNANAGIVVGIDPRDYPGDALAGIDLQR
RLESHAYVLGGSNYQAPAQLVGDFVAGRPSTALGSITPSYKPGVTIGDLSSALPGYAIDAMREAFPAFGRKIKGFDTHDA
VLTGVETRTSSPIKISRGEDLQSLNVRGLYPAGEGASYAGGILSAGVDGIKVAEAVARNLLSA

Sequences:

>Translated_543_residues
MIRLTELKLPLDHAEDALPALMARTLGIAASDIATFQVHKRSFDARKAELLQVYIADVELAPALEAALLAKFAGHPHILP
SPDMAYHPVGTAPQGLPLRPVVIGFGPCGIFAALLLAQMGFKPIVLERGKTVRQRTKDTWGLWRKNVLNPESNVQFGEGG
AGTFSDGKLYSQIKDPRHLGRKVMNEFVKAGAPADILYEAHPHIGTFKLVKVVENMREQIIALGGEIRFEQRVTDVLIEV
GPGGKHLRGLTVQNQATGETHELRADHVVMALGHSSRDTFAMLYARGVYIEAKPFSIGFRVEHPQGIIDRARWGRHASHP
ALGAAEYKLVHHASNGRSVYSFCMCPGGTVVAATSEPERVVTNGMSQYSRNERNANAGIVVGIDPRDYPGDALAGIDLQR
RLESHAYVLGGSNYQAPAQLVGDFVAGRPSTALGSITPSYKPGVTIGDLSSALPGYAIDAMREAFPAFGRKIKGFDTHDA
VLTGVETRTSSPIKISRGEDLQSLNVRGLYPAGEGASYAGGILSAGVDGIKVAEAVARNLLSA
>Mature_543_residues
MIRLTELKLPLDHAEDALPALMARTLGIAASDIATFQVHKRSFDARKAELLQVYIADVELAPALEAALLAKFAGHPHILP
SPDMAYHPVGTAPQGLPLRPVVIGFGPCGIFAALLLAQMGFKPIVLERGKTVRQRTKDTWGLWRKNVLNPESNVQFGEGG
AGTFSDGKLYSQIKDPRHLGRKVMNEFVKAGAPADILYEAHPHIGTFKLVKVVENMREQIIALGGEIRFEQRVTDVLIEV
GPGGKHLRGLTVQNQATGETHELRADHVVMALGHSSRDTFAMLYARGVYIEAKPFSIGFRVEHPQGIIDRARWGRHASHP
ALGAAEYKLVHHASNGRSVYSFCMCPGGTVVAATSEPERVVTNGMSQYSRNERNANAGIVVGIDPRDYPGDALAGIDLQR
RLESHAYVLGGSNYQAPAQLVGDFVAGRPSTALGSITPSYKPGVTIGDLSSALPGYAIDAMREAFPAFGRKIKGFDTHDA
VLTGVETRTSSPIKISRGEDLQSLNVRGLYPAGEGASYAGGILSAGVDGIKVAEAVARNLLSA

Specific function: Unknown

COG id: COG2509

COG function: function code R; Uncharacterized FAD-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 58304; Mature: 58304

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLTELKLPLDHAEDALPALMARTLGIAASDIATFQVHKRSFDARKAELLQVYIADVEL
CEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHEEEEHHHHCCHHHHHHHHHHHHCCHH
APALEAALLAKFAGHPHILPSPDMAYHPVGTAPQGLPLRPVVIGFGPCGIFAALLLAQMG
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCC
FKPIVLERGKTVRQRTKDTWGLWRKNVLNPESNVQFGEGGAGTFSDGKLYSQIKDPRHLG
CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHCCHHHHH
RKVMNEFVKAGAPADILYEAHPHIGTFKLVKVVENMREQIIALGGEIRFEQRVTDVLIEV
HHHHHHHHHCCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHEEEEEEE
GPGGKHLRGLTVQNQATGETHELRADHVVMALGHSSRDTFAMLYARGVYIEAKPFSIGFR
CCCCCCEEEEEECCCCCCCHHHHCCCEEEEEECCCCCCCEEEEEECCEEEEECCEEEEEE
VEHPQGIIDRARWGRHASHPALGAAEYKLVHHASNGRSVYSFCMCPGGTVVAATSEPERV
EECCCCHHHHHHCCCCCCCCCCCCHHEEEEEECCCCCEEEEEEECCCCEEEEECCCCHHH
VTNGMSQYSRNERNANAGIVVGIDPRDYPGDALAGIDLQRRLESHAYVLGGSNYQAPAQL
HHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEECCHHHHHHHHCEEEEECCCCCCHHHH
VGDFVAGRPSTALGSITPSYKPGVTIGDLSSALPGYAIDAMREAFPAFGRKIKGFDTHDA
HHHHHCCCCCCCCCCCCCCCCCCCEECCHHHCCCCHHHHHHHHHHHHHCCEECCCCCCHH
VLTGVETRTSSPIKISRGEDLQSLNVRGLYPAGEGASYAGGILSAGVDGIKVAEAVARNL
HEECCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHH
LSA
HCC
>Mature Secondary Structure
MIRLTELKLPLDHAEDALPALMARTLGIAASDIATFQVHKRSFDARKAELLQVYIADVEL
CEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHEEEEHHHHCCHHHHHHHHHHHHCCHH
APALEAALLAKFAGHPHILPSPDMAYHPVGTAPQGLPLRPVVIGFGPCGIFAALLLAQMG
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCC
FKPIVLERGKTVRQRTKDTWGLWRKNVLNPESNVQFGEGGAGTFSDGKLYSQIKDPRHLG
CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHCCHHHHH
RKVMNEFVKAGAPADILYEAHPHIGTFKLVKVVENMREQIIALGGEIRFEQRVTDVLIEV
HHHHHHHHHCCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHEEEEEEE
GPGGKHLRGLTVQNQATGETHELRADHVVMALGHSSRDTFAMLYARGVYIEAKPFSIGFR
CCCCCCEEEEEECCCCCCCHHHHCCCEEEEEECCCCCCCEEEEEECCEEEEECCEEEEEE
VEHPQGIIDRARWGRHASHPALGAAEYKLVHHASNGRSVYSFCMCPGGTVVAATSEPERV
EECCCCHHHHHHCCCCCCCCCCCCHHEEEEEECCCCCEEEEEEECCCCEEEEECCCCHHH
VTNGMSQYSRNERNANAGIVVGIDPRDYPGDALAGIDLQRRLESHAYVLGGSNYQAPAQL
HHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEECCHHHHHHHHCEEEEECCCCCCHHHH
VGDFVAGRPSTALGSITPSYKPGVTIGDLSSALPGYAIDAMREAFPAFGRKIKGFDTHDA
HHHHHCCCCCCCCCCCCCCCCCCCEECCHHHCCCCHHHHHHHHHHHHHCCEECCCCCCHH
VLTGVETRTSSPIKISRGEDLQSLNVRGLYPAGEGASYAGGILSAGVDGIKVAEAVARNL
HEECCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHH
LSA
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8396545 [H]