Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yebQ [H]

Identifier: 91786877

GI number: 91786877

Start: 994472

End: 995983

Strand: Reverse

Name: yebQ [H]

Synonym: Bpro_0977

Alternate gene names: 91786877

Gene position: 995983-994472 (Counterclockwise)

Preceding gene: 91786879

Following gene: 91786875

Centisome position: 19.15

GC content: 64.62

Gene sequence:

>1512_bases
ATGTTGAAGTCAATCATTGCAAAACGAGATGGGGCGGTCGTTGGAAGTGCCGGAAGCGCGGAACGGACACCTTCGGTCCG
GTGGGCACTCGCCGCCCTTTCGCTGTCCATGTTGCTGTCCTCGCTCGGCACCAGCATCGCCAATGTGGGCTTGCCGACCT
TGGCACAGGCGTTCAACGCCTCCTTCCAGGAAGTCCAGTGGGTCGTCCTCGCGTATCTCCTCGCCATCACCACCCTGATC
GTCAGCGTCGGACGGCTCGGTGACATCACCGGCCGGAAGCGGCTGCTGCTGGCCGGCATCCTCCTGTTCACGGTGGCATC
AAGCCTGTGCGGCATCGCGCCCACGCTCTGGCTGCTGATTGCCGCCCGGGCGGCACAGGGCCTCGGAGCAGCCGTCATGA
TGGCCCTCACCATGGCATTTGTCGGTGAGACGGTTGCCAAGGCAAAGACCGGTAGCGCCATGGGCCTGCTCGGAACGATG
TCCGCGATGGGCACCGCTCTCGGTCCATCGCTTGGTGGCGTTCTGATCGCCGGACTCGGTTGGCCGGCCATCTTCTTCGT
CAATGTACCGCTGGGTATCCTGACTTTTCTTCTCGCACATCGCTACCTGCCCGTTGATCGCCGGGGGCCGAAGACTGATA
GCGCCGGTTTCGACCATGCGGGCACGCTGCTGCTGGCTCTGACGCTCGCGGCTTATGCACTCGCCATGACCATTCGTCAT
CATGACGGGCGCGGCAGTTTCGGTCCGCTGAACATGGCGCTGCTGTTGGCTGCTGCCCTGGGCGTCGGCCTCTTCGTGCG
CGCCCAGGCAAGAGCCGCATCCCCTTTGATCCGGTTGGCGATGTTCCGCGACCCAGGCTTAAGTGCAAGCCTCGCCATGA
GCGCACTCGTCTCGACGGTGATGATGGCAACGCTGGTGGTCGGGCCGTTCTATCTCTCCCGTGCGCTCGGGCTCAACGCG
GCACTTGTCGGACTCGTCTTGTCGGTCGGCCCGCTTGCCGCCGCGCTGGCCGGTGTGCCGGCCGGCCGCATGGCGGACCG
TTTTGGCGCACAACGCATGACCATCGTTGGGCTCATCGCCATAGCGGCCGGCTCCTTCGTGCTATCCATGGTGCCGGCGA
CGCCCGGCATCCCCGGCTACATCGCGCCCATCGTCGTCATCACCGTCGGCTATGCGCTGTTCATGACGGCCAACAACACC
GCCGTCATGACCGATATCCGTCCGGACCAGCGGGGCGTCATTTCCGGCATGCTCAGCCTGTCGCGCAATCTCGGGCTCAT
CACCGGCGCATCCGTGATGGGCGCGGTGTTCGCGCTCGCATCGGCAACGACCGACATCACAACGGCGCGTCCCGAGGCCG
TTGCCACCGGCATGCGATTCACGTTCGCAGTCGCGGCGATTCTGATCGTCGTCGCGCTCGCCATCGCGGTGGGAACTTAC
CGCCGCACATGGCGCAATCGGGCACCTGCTCCAGGAGCAGCGTTGCAGGCGAGCAAGAAAAATTCGGGATGA

Upstream 100 bases:

>100_bases
AAAGTGCAAATGGTGCGCCTTCCGCTATGCCAGGCAAAGAACTACGCTTCAGGCAGCTCCATTTCGGAGTCGCCAGCAAA
CGGAGCAGAAAGCGGAGTTC

Downstream 100 bases:

>100_bases
CCTCGCGGCACTTTAATTCGCGCAGGCTCGACCTTCCAGATGAAGGGTGAGTAACGCATTAGCGTTAACGATTCCGATGC
AGTTTCCCCTGCCGTAAGAA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MLKSIIAKRDGAVVGSAGSAERTPSVRWALAALSLSMLLSSLGTSIANVGLPTLAQAFNASFQEVQWVVLAYLLAITTLI
VSVGRLGDITGRKRLLLAGILLFTVASSLCGIAPTLWLLIAARAAQGLGAAVMMALTMAFVGETVAKAKTGSAMGLLGTM
SAMGTALGPSLGGVLIAGLGWPAIFFVNVPLGILTFLLAHRYLPVDRRGPKTDSAGFDHAGTLLLALTLAAYALAMTIRH
HDGRGSFGPLNMALLLAAALGVGLFVRAQARAASPLIRLAMFRDPGLSASLAMSALVSTVMMATLVVGPFYLSRALGLNA
ALVGLVLSVGPLAAALAGVPAGRMADRFGAQRMTIVGLIAIAAGSFVLSMVPATPGIPGYIAPIVVITVGYALFMTANNT
AVMTDIRPDQRGVISGMLSLSRNLGLITGASVMGAVFALASATTDITTARPEAVATGMRFTFAVAAILIVVALAIAVGTY
RRTWRNRAPAPGAALQASKKNSG

Sequences:

>Translated_503_residues
MLKSIIAKRDGAVVGSAGSAERTPSVRWALAALSLSMLLSSLGTSIANVGLPTLAQAFNASFQEVQWVVLAYLLAITTLI
VSVGRLGDITGRKRLLLAGILLFTVASSLCGIAPTLWLLIAARAAQGLGAAVMMALTMAFVGETVAKAKTGSAMGLLGTM
SAMGTALGPSLGGVLIAGLGWPAIFFVNVPLGILTFLLAHRYLPVDRRGPKTDSAGFDHAGTLLLALTLAAYALAMTIRH
HDGRGSFGPLNMALLLAAALGVGLFVRAQARAASPLIRLAMFRDPGLSASLAMSALVSTVMMATLVVGPFYLSRALGLNA
ALVGLVLSVGPLAAALAGVPAGRMADRFGAQRMTIVGLIAIAAGSFVLSMVPATPGIPGYIAPIVVITVGYALFMTANNT
AVMTDIRPDQRGVISGMLSLSRNLGLITGASVMGAVFALASATTDITTARPEAVATGMRFTFAVAAILIVVALAIAVGTY
RRTWRNRAPAPGAALQASKKNSG
>Mature_503_residues
MLKSIIAKRDGAVVGSAGSAERTPSVRWALAALSLSMLLSSLGTSIANVGLPTLAQAFNASFQEVQWVVLAYLLAITTLI
VSVGRLGDITGRKRLLLAGILLFTVASSLCGIAPTLWLLIAARAAQGLGAAVMMALTMAFVGETVAKAKTGSAMGLLGTM
SAMGTALGPSLGGVLIAGLGWPAIFFVNVPLGILTFLLAHRYLPVDRRGPKTDSAGFDHAGTLLLALTLAAYALAMTIRH
HDGRGSFGPLNMALLLAAALGVGLFVRAQARAASPLIRLAMFRDPGLSASLAMSALVSTVMMATLVVGPFYLSRALGLNA
ALVGLVLSVGPLAAALAGVPAGRMADRFGAQRMTIVGLIAIAAGSFVLSMVPATPGIPGYIAPIVVITVGYALFMTANNT
AVMTDIRPDQRGVISGMLSLSRNLGLITGASVMGAVFALASATTDITTARPEAVATGMRFTFAVAAILIVVALAIAVGTY
RRTWRNRAPAPGAALQASKKNSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

Organism=Escherichia coli, GI87081983, Length=393, Percent_Identity=32.0610687022901, Blast_Score=176, Evalue=4e-45,
Organism=Escherichia coli, GI1790195, Length=471, Percent_Identity=23.5668789808917, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1788392, Length=446, Percent_Identity=28.2511210762332, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI1789042, Length=410, Percent_Identity=23.9024390243902, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788710, Length=299, Percent_Identity=25.4180602006689, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1790146, Length=181, Percent_Identity=28.1767955801105, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6323735, Length=438, Percent_Identity=23.2876712328767, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6319770, Length=393, Percent_Identity=21.882951653944, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6324264, Length=184, Percent_Identity=31.5217391304348, Blast_Score=75, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6321663, Length=142, Percent_Identity=27.4647887323944, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324954, Length=296, Percent_Identity=26.6891891891892, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001411 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 51361; Mature: 51361

Theoretical pI: Translated: 11.89; Mature: 11.89

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSIIAKRDGAVVGSAGSAERTPSVRWALAALSLSMLLSSLGTSIANVGLPTLAQAFNA
CCHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
SFQEVQWVVLAYLLAITTLIVSVGRLGDITGRKRLLLAGILLFTVASSLCGIAPTLWLLI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARAAQGLGAAVMMALTMAFVGETVAKAKTGSAMGLLGTMSAMGTALGPSLGGVLIAGLG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCC
WPAIFFVNVPLGILTFLLAHRYLPVDRRGPKTDSAGFDHAGTLLLALTLAAYALAMTIRH
CCCHHEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
HDGRGSFGPLNMALLLAAALGVGLFVRAQARAASPLIRLAMFRDPGLSASLAMSALVSTV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
MMATLVVGPFYLSRALGLNAALVGLVLSVGPLAAALAGVPAGRMADRFGAQRMTIVGLIA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHH
IAAGSFVLSMVPATPGIPGYIAPIVVITVGYALFMTANNTAVMTDIRPDQRGVISGMLSL
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCCEEEECCCCCHHHHHHHHHHH
SRNLGLITGASVMGAVFALASATTDITTARPEAVATGMRFTFAVAAILIVVALAIAVGTY
HHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRTWRNRAPAPGAALQASKKNSG
HHHHHCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MLKSIIAKRDGAVVGSAGSAERTPSVRWALAALSLSMLLSSLGTSIANVGLPTLAQAFNA
CCHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
SFQEVQWVVLAYLLAITTLIVSVGRLGDITGRKRLLLAGILLFTVASSLCGIAPTLWLLI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARAAQGLGAAVMMALTMAFVGETVAKAKTGSAMGLLGTMSAMGTALGPSLGGVLIAGLG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCC
WPAIFFVNVPLGILTFLLAHRYLPVDRRGPKTDSAGFDHAGTLLLALTLAAYALAMTIRH
CCCHHEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
HDGRGSFGPLNMALLLAAALGVGLFVRAQARAASPLIRLAMFRDPGLSASLAMSALVSTV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
MMATLVVGPFYLSRALGLNAALVGLVLSVGPLAAALAGVPAGRMADRFGAQRMTIVGLIA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHH
IAAGSFVLSMVPATPGIPGYIAPIVVITVGYALFMTANNTAVMTDIRPDQRGVISGMLSL
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCCEEEECCCCCHHHHHHHHHHH
SRNLGLITGASVMGAVFALASATTDITTARPEAVATGMRFTFAVAAILIVVALAIAVGTY
HHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRTWRNRAPAPGAALQASKKNSG
HHHHHCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]