Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91786875

Identifier: 91786875

GI number: 91786875

Start: 992015

End: 992989

Strand: Reverse

Name: 91786875

Synonym: Bpro_0974

Alternate gene names: NA

Gene position: 992989-992015 (Counterclockwise)

Preceding gene: 91786877

Following gene: 91786874

Centisome position: 19.09

GC content: 62.15

Gene sequence:

>975_bases
ATGAAACGCCGTGAACTTCTCACCTCCGTGCCGGCGCTTGCTGCCGGCACCTTGCCATCATGGGCCACAGCACAGTATGC
CTATCCGAGCGCGCCCGTGAAGGTGCTGGTGGGGTTTCCTCCAGGTACAGCAACAGACGCGGCGGTGCGCACCTTGGTAG
AGCAGATGTCCAGGCGCCTGGGCCAGCCCTTCATCGTGGACAACAAGTCTGGCGGGGGCAGCAACATCGCCGCCAAGGCA
GTGGCCACGGCCAAGCCCGATGGCTACACCCTCTTCGCGATCACGGTCGCCAACATCATCAACGGCGCGTTTCCGGGCGC
CAATGCGGTCGACCCATTGAAGGAGTTCAAGCCGATCACGCTGATCGGGAACGTTCCCAATGTCCTGGTGGTTCATCCCT
CGCTGAAGGTCACGACCGTTGCCGAGCTCATTGCGCTCGCAAAGGCCAAGCCCGGCTCCCTGACCTATGCCTCATCCGGC
GTCGGCACCTCCCCCCATCTATCGGGTGAACAGTTCGCGCTCATGGCCAACGTCAAGATGGTCCACGTCCCATACAGGGG
GAGCACGCCTGCGGTGACAGACCTGCTTGGCGGCCAGGTGCAGCTCATGTTCTCACCGGCTTCGACCGTGCTGCCGCACG
TCCGGGCGAACAAGTTGGTAGCGCTGGCCGTCACCACCCTTAGCAGGACGTCAAGCGCGCCGGAACTCTACACGCTCGAC
GAACTGGGACTGAAGGGTTTTAACACTTCTGTGTGGATGGGGCTGGTGGCCCCGGCCCAGACACCATCCAGTGTCATCAG
CAAGCTGCGCGCCACGGCCCACGCGGCGCTCGATTCAAGCGAGGTCCAGGCGATCTACAAGGCGCAGGCAATCGACACGC
TCAAAACCAGCGATGAAGAGCTGTCCCGCTTCCTGCAGAACGAGATGGCGCGGTGGTCGAAGTTCATTAAACAGGCAGAC
ATCAAGCCCGAGTAA

Upstream 100 bases:

>100_bases
AGAAAGTCTCGTTTGAAATATAGCCCGTTTGATCTTCTAATCACTACCAGTGCAGGGCGGTAAAGACCCGATCTGCACTG
ATAACAGAAAGACCAGAGAC

Downstream 100 bases:

>100_bases
GACAAGCTTTTTTCAAAAGGAATACAGAAATGTCCAAACTACACGCCACCGAGTGCCGCGAATTCATTGCGGCGGTAACC
GAGAAAGCTGTCAATATGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MKRRELLTSVPALAAGTLPSWATAQYAYPSAPVKVLVGFPPGTATDAAVRTLVEQMSRRLGQPFIVDNKSGGGSNIAAKA
VATAKPDGYTLFAITVANIINGAFPGANAVDPLKEFKPITLIGNVPNVLVVHPSLKVTTVAELIALAKAKPGSLTYASSG
VGTSPHLSGEQFALMANVKMVHVPYRGSTPAVTDLLGGQVQLMFSPASTVLPHVRANKLVALAVTTLSRTSSAPELYTLD
ELGLKGFNTSVWMGLVAPAQTPSSVISKLRATAHAALDSSEVQAIYKAQAIDTLKTSDEELSRFLQNEMARWSKFIKQAD
IKPE

Sequences:

>Translated_324_residues
MKRRELLTSVPALAAGTLPSWATAQYAYPSAPVKVLVGFPPGTATDAAVRTLVEQMSRRLGQPFIVDNKSGGGSNIAAKA
VATAKPDGYTLFAITVANIINGAFPGANAVDPLKEFKPITLIGNVPNVLVVHPSLKVTTVAELIALAKAKPGSLTYASSG
VGTSPHLSGEQFALMANVKMVHVPYRGSTPAVTDLLGGQVQLMFSPASTVLPHVRANKLVALAVTTLSRTSSAPELYTLD
ELGLKGFNTSVWMGLVAPAQTPSSVISKLRATAHAALDSSEVQAIYKAQAIDTLKTSDEELSRFLQNEMARWSKFIKQAD
IKPE
>Mature_324_residues
MKRRELLTSVPALAAGTLPSWATAQYAYPSAPVKVLVGFPPGTATDAAVRTLVEQMSRRLGQPFIVDNKSGGGSNIAAKA
VATAKPDGYTLFAITVANIINGAFPGANAVDPLKEFKPITLIGNVPNVLVVHPSLKVTTVAELIALAKAKPGSLTYASSG
VGTSPHLSGEQFALMANVKMVHVPYRGSTPAVTDLLGGQVQLMFSPASTVLPHVRANKLVALAVTTLSRTSSAPELYTLD
ELGLKGFNTSVWMGLVAPAQTPSSVISKLRATAHAALDSSEVQAIYKAQAIDTLKTSDEELSRFLQNEMARWSKFIKQAD
IKPE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34145; Mature: 34145

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRELLTSVPALAAGTLPSWATAQYAYPSAPVKVLVGFPPGTATDAAVRTLVEQMSRRL
CCHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC
GQPFIVDNKSGGGSNIAAKAVATAKPDGYTLFAITVANIINGAFPGANAVDPLKEFKPIT
CCCEEEECCCCCCCCHHHHEEEECCCCCEEEEHEEHHHHHHCCCCCCCCCCHHHHCCCEE
LIGNVPNVLVVHPSLKVTTVAELIALAKAKPGSLTYASSGVGTSPHLSGEQFALMANVKM
EECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCEEEEECEEE
VHVPYRGSTPAVTDLLGGQVQLMFSPASTVLPHVRANKLVALAVTTLSRTSSAPELYTLD
EEECCCCCCCHHHHHCCCEEEEEECCHHHHCCCCCCCCEEEEEEEHHHCCCCCCCEEEHH
ELGLKGFNTSVWMGLVAPAQTPSSVISKLRATAHAALDSSEVQAIYKAQAIDTLKTSDEE
HHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHH
LSRFLQNEMARWSKFIKQADIKPE
HHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKRRELLTSVPALAAGTLPSWATAQYAYPSAPVKVLVGFPPGTATDAAVRTLVEQMSRRL
CCHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC
GQPFIVDNKSGGGSNIAAKAVATAKPDGYTLFAITVANIINGAFPGANAVDPLKEFKPIT
CCCEEEECCCCCCCCHHHHEEEECCCCCEEEEHEEHHHHHHCCCCCCCCCCHHHHCCCEE
LIGNVPNVLVVHPSLKVTTVAELIALAKAKPGSLTYASSGVGTSPHLSGEQFALMANVKM
EECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCEEEEECEEE
VHVPYRGSTPAVTDLLGGQVQLMFSPASTVLPHVRANKLVALAVTTLSRTSSAPELYTLD
EEECCCCCCCHHHHHCCCEEEEEECCHHHHCCCCCCCCEEEEEEEHHHCCCCCCCEEEHH
ELGLKGFNTSVWMGLVAPAQTPSSVISKLRATAHAALDSSEVQAIYKAQAIDTLKTSDEE
HHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHH
LSRFLQNEMARWSKFIKQADIKPE
HHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]