| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786875
Identifier: 91786875
GI number: 91786875
Start: 992015
End: 992989
Strand: Reverse
Name: 91786875
Synonym: Bpro_0974
Alternate gene names: NA
Gene position: 992989-992015 (Counterclockwise)
Preceding gene: 91786877
Following gene: 91786874
Centisome position: 19.09
GC content: 62.15
Gene sequence:
>975_bases ATGAAACGCCGTGAACTTCTCACCTCCGTGCCGGCGCTTGCTGCCGGCACCTTGCCATCATGGGCCACAGCACAGTATGC CTATCCGAGCGCGCCCGTGAAGGTGCTGGTGGGGTTTCCTCCAGGTACAGCAACAGACGCGGCGGTGCGCACCTTGGTAG AGCAGATGTCCAGGCGCCTGGGCCAGCCCTTCATCGTGGACAACAAGTCTGGCGGGGGCAGCAACATCGCCGCCAAGGCA GTGGCCACGGCCAAGCCCGATGGCTACACCCTCTTCGCGATCACGGTCGCCAACATCATCAACGGCGCGTTTCCGGGCGC CAATGCGGTCGACCCATTGAAGGAGTTCAAGCCGATCACGCTGATCGGGAACGTTCCCAATGTCCTGGTGGTTCATCCCT CGCTGAAGGTCACGACCGTTGCCGAGCTCATTGCGCTCGCAAAGGCCAAGCCCGGCTCCCTGACCTATGCCTCATCCGGC GTCGGCACCTCCCCCCATCTATCGGGTGAACAGTTCGCGCTCATGGCCAACGTCAAGATGGTCCACGTCCCATACAGGGG GAGCACGCCTGCGGTGACAGACCTGCTTGGCGGCCAGGTGCAGCTCATGTTCTCACCGGCTTCGACCGTGCTGCCGCACG TCCGGGCGAACAAGTTGGTAGCGCTGGCCGTCACCACCCTTAGCAGGACGTCAAGCGCGCCGGAACTCTACACGCTCGAC GAACTGGGACTGAAGGGTTTTAACACTTCTGTGTGGATGGGGCTGGTGGCCCCGGCCCAGACACCATCCAGTGTCATCAG CAAGCTGCGCGCCACGGCCCACGCGGCGCTCGATTCAAGCGAGGTCCAGGCGATCTACAAGGCGCAGGCAATCGACACGC TCAAAACCAGCGATGAAGAGCTGTCCCGCTTCCTGCAGAACGAGATGGCGCGGTGGTCGAAGTTCATTAAACAGGCAGAC ATCAAGCCCGAGTAA
Upstream 100 bases:
>100_bases AGAAAGTCTCGTTTGAAATATAGCCCGTTTGATCTTCTAATCACTACCAGTGCAGGGCGGTAAAGACCCGATCTGCACTG ATAACAGAAAGACCAGAGAC
Downstream 100 bases:
>100_bases GACAAGCTTTTTTCAAAAGGAATACAGAAATGTCCAAACTACACGCCACCGAGTGCCGCGAATTCATTGCGGCGGTAACC GAGAAAGCTGTCAATATGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKRRELLTSVPALAAGTLPSWATAQYAYPSAPVKVLVGFPPGTATDAAVRTLVEQMSRRLGQPFIVDNKSGGGSNIAAKA VATAKPDGYTLFAITVANIINGAFPGANAVDPLKEFKPITLIGNVPNVLVVHPSLKVTTVAELIALAKAKPGSLTYASSG VGTSPHLSGEQFALMANVKMVHVPYRGSTPAVTDLLGGQVQLMFSPASTVLPHVRANKLVALAVTTLSRTSSAPELYTLD ELGLKGFNTSVWMGLVAPAQTPSSVISKLRATAHAALDSSEVQAIYKAQAIDTLKTSDEELSRFLQNEMARWSKFIKQAD IKPE
Sequences:
>Translated_324_residues MKRRELLTSVPALAAGTLPSWATAQYAYPSAPVKVLVGFPPGTATDAAVRTLVEQMSRRLGQPFIVDNKSGGGSNIAAKA VATAKPDGYTLFAITVANIINGAFPGANAVDPLKEFKPITLIGNVPNVLVVHPSLKVTTVAELIALAKAKPGSLTYASSG VGTSPHLSGEQFALMANVKMVHVPYRGSTPAVTDLLGGQVQLMFSPASTVLPHVRANKLVALAVTTLSRTSSAPELYTLD ELGLKGFNTSVWMGLVAPAQTPSSVISKLRATAHAALDSSEVQAIYKAQAIDTLKTSDEELSRFLQNEMARWSKFIKQAD IKPE >Mature_324_residues MKRRELLTSVPALAAGTLPSWATAQYAYPSAPVKVLVGFPPGTATDAAVRTLVEQMSRRLGQPFIVDNKSGGGSNIAAKA VATAKPDGYTLFAITVANIINGAFPGANAVDPLKEFKPITLIGNVPNVLVVHPSLKVTTVAELIALAKAKPGSLTYASSG VGTSPHLSGEQFALMANVKMVHVPYRGSTPAVTDLLGGQVQLMFSPASTVLPHVRANKLVALAVTTLSRTSSAPELYTLD ELGLKGFNTSVWMGLVAPAQTPSSVISKLRATAHAALDSSEVQAIYKAQAIDTLKTSDEELSRFLQNEMARWSKFIKQAD IKPE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34145; Mature: 34145
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRELLTSVPALAAGTLPSWATAQYAYPSAPVKVLVGFPPGTATDAAVRTLVEQMSRRL CCHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC GQPFIVDNKSGGGSNIAAKAVATAKPDGYTLFAITVANIINGAFPGANAVDPLKEFKPIT CCCEEEECCCCCCCCHHHHEEEECCCCCEEEEHEEHHHHHHCCCCCCCCCCHHHHCCCEE LIGNVPNVLVVHPSLKVTTVAELIALAKAKPGSLTYASSGVGTSPHLSGEQFALMANVKM EECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCEEEEECEEE VHVPYRGSTPAVTDLLGGQVQLMFSPASTVLPHVRANKLVALAVTTLSRTSSAPELYTLD EEECCCCCCCHHHHHCCCEEEEEECCHHHHCCCCCCCCEEEEEEEHHHCCCCCCCEEEHH ELGLKGFNTSVWMGLVAPAQTPSSVISKLRATAHAALDSSEVQAIYKAQAIDTLKTSDEE HHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHH LSRFLQNEMARWSKFIKQADIKPE HHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKRRELLTSVPALAAGTLPSWATAQYAYPSAPVKVLVGFPPGTATDAAVRTLVEQMSRRL CCHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC GQPFIVDNKSGGGSNIAAKAVATAKPDGYTLFAITVANIINGAFPGANAVDPLKEFKPIT CCCEEEECCCCCCCCHHHHEEEECCCCCEEEEHEEHHHHHHCCCCCCCCCCHHHHCCCEE LIGNVPNVLVVHPSLKVTTVAELIALAKAKPGSLTYASSGVGTSPHLSGEQFALMANVKM EECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCEEEEECEEE VHVPYRGSTPAVTDLLGGQVQLMFSPASTVLPHVRANKLVALAVTTLSRTSSAPELYTLD EEECCCCCCCHHHHHCCCEEEEEECCHHHHCCCCCCCCEEEEEEEHHHCCCCCCCEEEHH ELGLKGFNTSVWMGLVAPAQTPSSVISKLRATAHAALDSSEVQAIYKAQAIDTLKTSDEE HHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHH LSRFLQNEMARWSKFIKQADIKPE HHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]