| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786857
Identifier: 91786857
GI number: 91786857
Start: 978358
End: 978978
Strand: Reverse
Name: 91786857
Synonym: Bpro_0955
Alternate gene names: NA
Gene position: 978978-978358 (Counterclockwise)
Preceding gene: 91786858
Following gene: 91786856
Centisome position: 18.83
GC content: 55.39
Gene sequence:
>621_bases ATGATAATTCTGTCGGACACCGATGTCGTCCATAAGCTCGCCTGCTGCGAGTTGCTTCTCGAATTCCTTCAGTACCTGCA ATGCCCGCCTAACGAGGTCTGGGTACTCCCGGCGCTTCCACAGATGCTTAAGCGTAAGCTCGCCAAGGCCCCCGCGGCTG CAGGGAACGTCGAGCAATTCATGGCGAAGGTGAAGAGAATTCCAGCCGCGAACGTTGCCACTCTTGAACGGTTCTCGAAT CTGGACGTTGGAGAGCAACAGCTCTTAGCCATTCTTTGTGATGACCAGCGCGTGAAGCACTTGGTGACTGGAGACAAACG AGCACTCGACCAAGTGGCGGCACTTTCTTTCGGGGATGCTCAGCTAAAGACTCGGCTCGAGGAGACTTCCATCTATTGCT TCGAGGCTATAGTGCTTGGCCTATTGCAAAAGAGGGGCTTCGGCATCGTGCAGGCACGCATCAACAACAAATGGGCCAAG CTCGCAGGTCAGCAAGTTGACGGCGTCATCTCGAGGGCGTTCCCGCTAGGTGGATCCGAGGAGCTAGCGAGGACAGTGCT TAGCGAGCACTTGGCAACCTTGCGGGTTGGGCTGCAACAGCTTCAGTTTGAGACAGTCTAA
Upstream 100 bases:
>100_bases GGCATTTTTCCGAGCGATTGACCGCGATTTGGTTTCAGAGGATCAGCTAGATCTCTTGAAGGTCGCTACTGGCTATACCG ATTAGCGTTCCGTAGGCCCG
Downstream 100 bases:
>100_bases GGCTCGCTGAATTAGCAGAACCGGCCAATCGCGGCGCTCTATCCGTTGTAACTTATGCCAGCCCCGCCCCGAGCGGGCTT TTTTACGCCCATTCGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MIILSDTDVVHKLACCELLLEFLQYLQCPPNEVWVLPALPQMLKRKLAKAPAAAGNVEQFMAKVKRIPAANVATLERFSN LDVGEQQLLAILCDDQRVKHLVTGDKRALDQVAALSFGDAQLKTRLEETSIYCFEAIVLGLLQKRGFGIVQARINNKWAK LAGQQVDGVISRAFPLGGSEELARTVLSEHLATLRVGLQQLQFETV
Sequences:
>Translated_206_residues MIILSDTDVVHKLACCELLLEFLQYLQCPPNEVWVLPALPQMLKRKLAKAPAAAGNVEQFMAKVKRIPAANVATLERFSN LDVGEQQLLAILCDDQRVKHLVTGDKRALDQVAALSFGDAQLKTRLEETSIYCFEAIVLGLLQKRGFGIVQARINNKWAK LAGQQVDGVISRAFPLGGSEELARTVLSEHLATLRVGLQQLQFETV >Mature_206_residues MIILSDTDVVHKLACCELLLEFLQYLQCPPNEVWVLPALPQMLKRKLAKAPAAAGNVEQFMAKVKRIPAANVATLERFSN LDVGEQQLLAILCDDQRVKHLVTGDKRALDQVAALSFGDAQLKTRLEETSIYCFEAIVLGLLQKRGFGIVQARINNKWAK LAGQQVDGVISRAFPLGGSEELARTVLSEHLATLRVGLQQLQFETV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22762; Mature: 22762
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIILSDTDVVHKLACCELLLEFLQYLQCPPNEVWVLPALPQMLKRKLAKAPAAAGNVEQF CEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHCCCCCCCHHHH MAKVKRIPAANVATLERFSNLDVGEQQLLAILCDDQRVKHLVTGDKRALDQVAALSFGDA HHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCHH QLKTRLEETSIYCFEAIVLGLLQKRGFGIVQARINNKWAKLAGQQVDGVISRAFPLGGSE HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ELARTVLSEHLATLRVGLQQLQFETV HHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIILSDTDVVHKLACCELLLEFLQYLQCPPNEVWVLPALPQMLKRKLAKAPAAAGNVEQF CEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHCCCCCCCHHHH MAKVKRIPAANVATLERFSNLDVGEQQLLAILCDDQRVKHLVTGDKRALDQVAALSFGDA HHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCHH QLKTRLEETSIYCFEAIVLGLLQKRGFGIVQARINNKWAKLAGQQVDGVISRAFPLGGSE HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ELARTVLSEHLATLRVGLQQLQFETV HHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA