| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786856
Identifier: 91786856
GI number: 91786856
Start: 977693
End: 978130
Strand: Reverse
Name: 91786856
Synonym: Bpro_0954
Alternate gene names: NA
Gene position: 978130-977693 (Counterclockwise)
Preceding gene: 91786857
Following gene: 91786851
Centisome position: 18.81
GC content: 49.77
Gene sequence:
>438_bases GTGTCTCAACTCGCGCAAAAATTGGCTTCTTACGAAAATCGCTTCAAGAACCACCAGAAGCAGGTCGATCAGTTCTTTGA GACGGCGAAAGTTGCTTTCAACACCGAATACTTTCCTTCGATCAAGGTTACGCGTGCTGAGGATGACAAAGGCCAGCTGT CAGCACTAGGGATGCGCTACGAACTGGACTTCCGATTTGTTGTCTTAGCAGATGGACCTACTACTCTCTTGGAGGTGTCC CTCCCTGCGACAGCTCACACCGGCAAAGAACGGCTAGCACTTTGGTACGTTGATAGCCTGGGGAATGTGCGCACTGACCC AAACAATTCCTTCAGCACGGCTAATGTCGACGAAAAGTCTTTTTTAATCGAGCTCGTGGACAAGGCCCAACAAGCCTACT TTGCACTCGTTAAGAAGACGCTGCCAACTATCCAGTAG
Upstream 100 bases:
>100_bases TGAGTGGTCAAACTCTTGTTCCACTGCTCGTTATTGGCCGTTATTTCCTTCAGGGCGCCGTGCAATACTGTGGCGCTCTG CAATTCAAAGGGGGCGTACT
Downstream 100 bases:
>100_bases CGGATAACCCAGCGCGGACGCTGACCGCGTGGTACTTCCCAGATAGTGGGCATTTATGTGGGAACGGAAAGCAAAACGGG GCGCTAGGCCCCGTGTTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSQLAQKLASYENRFKNHQKQVDQFFETAKVAFNTEYFPSIKVTRAEDDKGQLSALGMRYELDFRFVVLADGPTTLLEVS LPATAHTGKERLALWYVDSLGNVRTDPNNSFSTANVDEKSFLIELVDKAQQAYFALVKKTLPTIQ
Sequences:
>Translated_145_residues MSQLAQKLASYENRFKNHQKQVDQFFETAKVAFNTEYFPSIKVTRAEDDKGQLSALGMRYELDFRFVVLADGPTTLLEVS LPATAHTGKERLALWYVDSLGNVRTDPNNSFSTANVDEKSFLIELVDKAQQAYFALVKKTLPTIQ >Mature_144_residues SQLAQKLASYENRFKNHQKQVDQFFETAKVAFNTEYFPSIKVTRAEDDKGQLSALGMRYELDFRFVVLADGPTTLLEVSL PATAHTGKERLALWYVDSLGNVRTDPNNSFSTANVDEKSFLIELVDKAQQAYFALVKKTLPTIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16428; Mature: 16297
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLAQKLASYENRFKNHQKQVDQFFETAKVAFNTEYFPSIKVTRAEDDKGQLSALGMRY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHCCEEE ELDFRFVVLADGPTTLLEVSLPATAHTGKERLALWYVDSLGNVRTDPNNSFSTANVDEKS EEEEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHH FLIELVDKAQQAYFALVKKTLPTIQ HHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SQLAQKLASYENRFKNHQKQVDQFFETAKVAFNTEYFPSIKVTRAEDDKGQLSALGMRY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHCCEEE ELDFRFVVLADGPTTLLEVSLPATAHTGKERLALWYVDSLGNVRTDPNNSFSTANVDEKS EEEEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHH FLIELVDKAQQAYFALVKKTLPTIQ HHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA